Search results for "Arabidopsis"

Hits ?▲	Authors	Title	Venue	Year	Link
18	Artem Lysenko, Michael Defoin-Platel, Keywan Hassani-Pak, Jan Taubert, Charlie Hodgman, Christopher J. Rawlings, Mansoor A. S. Saqi	Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
18	Johannes Eichner, Georg Zeller, Sascha Laubinger, Gunnar Rätsch	Support vector machines-based identification of alternative splicing in Arabidopsis thaliana from whole-genome tiling arrays.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
18	Cheng-Wei Yao, Ban-Dar Hsu, Bor-Sen Chen	Constructing gene regulatory networks for long term photosynthetic light acclimation in Arabidopsis thaliana.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
18	Jianhua Ruan, Joseph Perez, Brian Hernandez, Chengwei Lei, Garry Sunter, Valerie M. Sponsel	Systematic identification of functional modules and cis-regulatory elements in Arabidopsis thaliana.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
18	Min Wu, Elin Grahn, Leif A. Eriksson, Åke Strid	Computational Evidence for the Role of Arabidopsis thaliana UVR8 as UV-B Photoreceptor and Identification of Its Chromophore Amino Acids.	J. Chem. Inf. Model.	2011	DBLP DOI BibTeX RDF
18	Yu S. Huang, Matthew Horton, Bjarni J. Vilhjálmsson, Ümit Seren, Dazhe Meng, Christopher Meyer, Muhammad Ali Amer, Justin O. Borevitz, Joy Bergelson, Magnus Nordborg	Analysis and visualization of Arabidopsis thaliana GWAS using web 2.0 technologies.	Database J. Biol. Databases Curation	2011	DBLP DOI BibTeX RDF
18	Shruti Rastogi, Burkhard Rost	LocDB: experimental annotations of localization for Homo sapiens and Arabidopsis thaliana.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
18	Astrid S. Block-Schmidt, Stefanie Dukowic-Schulze, Kristina Wanieck, Wim Reidt, Holger Puchta	BRCC36A is epistatic to BRCA1 in DNA crosslink repair and homologous recombination in Arabidopsis thaliana.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
18	Alper Yilmaz, Maria Katherine Mejia-Guerra, Kyle Kurz, Xiaoyu Liang, Lonnie R. Welch, Erich Grotewold	AGRIS: the Arabidopsis Gene Regulatory Information Server, an update.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
18	Zhiqiang Jiang, Xiao-Chuan Liu, Zhiyu Peng, Yinan Wan, Yusi Ji, Wenrong He, Wen Wan, Jingchu Luo, Hongwei Guo	AHD2.0: an update version of Arabidopsis Hormone Database for plant systematic studies.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
18	Mingzhi Lin, Xueling Shen, Xin Chen	PAIR: the predicted Arabidopsis interactome resource.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
18	Peng Li, Weidong Zang, Yuhua Li, Feng Xu, Jigang Wang, Tieliu Shi	AtPID: the overall hierarchical functional protein interaction network interface and analytic platform for Arabidopsis.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
18	Qing-Ju Jiao, Yan Huang, Hong-Bin Shen	Large-scale mining co-expressed genes in Arabidopsis anther: From pair to group.	Comput. Biol. Chem.	2011	DBLP DOI BibTeX RDF
18	Sebastian Henkel, Thomas Nägele, Imke Hörmiller, Thomas Sauter, Oliver Sawodny, Michael Ederer, Arnd G. Heyer	A systems biology approach to analyse leaf carbohydrate metabolism in Arabidopsis thaliana.	EURASIP J. Bioinform. Syst. Biol.	2011	DBLP DOI BibTeX RDF
18	Stuart Meier, Oren Tzfadia, Ratnakar Vallabhaneni, Chris Gehring, Eleanore T. Wurtzel	A transcriptional analysis of carotenoid, chlorophyll and plastidial isoprenoid biosynthesis genes during development and osmotic stress responses in Arabidopsis thaliana.	BMC Syst. Biol.	2011	DBLP DOI BibTeX RDF
18	Jigang Wang, Xiaojie Qiu, Yuhua Li, Youping Deng, Tieliu Shi	A transcriptional dynamic network during Arabidopsis thaliana pollen development.	BMC Syst. Biol.	2011	DBLP DOI BibTeX RDF
18	Atsushi Fukushima, Miyako Kusano, Henning Redestig, Masanori Arita, Kazuki Saito	Metabolomic correlation-network modules in Arabidopsis based on a graph-clustering approach.	BMC Syst. Biol.	2011	DBLP DOI BibTeX RDF
18	Celine Diaz, Miyako Kusano, Ronan Sulpice, Mitsutaka Araki, Henning Redestig, Kazuki Saito, Mark Stitt, Ryoung Shin	Determining novel functions of Arabidopsis 14-3-3 proteins in central metabolic processes.	BMC Syst. Biol.	2011	DBLP DOI BibTeX RDF
18	Yassin Refahi, Etienne Farcot, Yann Guédon, Fabrice Besnard, Teva Vernoux, Christophe Godin	A Combinatorial Model of Phyllotaxis Perturbations in Arabidopsis thaliana.	CPM	2011	DBLP DOI BibTeX RDF
18	Jiandong Ding, Shusi Yu, Uwe Ohler, Jihong Guan, Shuigeng Zhou	imiRTP: An Integrated Method to Identifying miRNA-target Interactions in Arabidopsis thaliana.	BIBM	2011	DBLP DOI BibTeX RDF
18	Nicolas Glade, Adrien Elena, Fabien Corblin, Eric Fanchon, Jacques Demongeot, Hedi Ben Amor	Determination, Optimization and Taxonomy of Regulatory Networks: The Example of Arabidopsis thaliana Flower Morphogenesis.	AINA Workshops	2011	DBLP DOI BibTeX RDF
18	Pedro Quelhas, Jeroen Nieuwland, Walter Dewitte, Ana Maria Mendonça, Jim Murray, Aurélio C. Campilho	Arabidopsis Thaliana Automatic Cell File Detection and Cell Length Estimation.	ICIAR (2)	2011	DBLP DOI BibTeX RDF
18	Vishal Bahirwani, Doina Caragea	Study on regulatory motifs in Arabidopsis thaliana.	BCB	2011	DBLP DOI BibTeX RDF
18	Mariana Benítez, Elena R. Álvarez-Buylla	Dynamic-module redundancy confers robustness to the gene regulatory network involved in hair patterning of Arabidopsis epidermis.	Biosyst.	2010	DBLP DOI BibTeX RDF
18	Nadine S. Schaadt, Jan Christoph, Volkhard Helms	Classifying Substrate Specificities of Membrane Transporters from Arabidopsis thaliana.	J. Chem. Inf. Model.	2010	DBLP DOI BibTeX RDF
18	Artem Lysenko, Matthew Morritt Hindle, Jan Taubert, Mansoor A. S. Saqi, Christopher J. Rawlings	Data integration for plant genomics - exemplars from the integration of Arabidopsis thaliana databases.	Briefings Bioinform.	2010	DBLP DOI BibTeX RDF
18	Lorenz Bülow, Yuri Brill, Reinhard Hehl	AthaMap-assisted transcription factor target gene identification in Arabidopsis thaliana.	Database J. Biol. Databases Curation	2010	DBLP DOI BibTeX RDF
18	Pawel Durek, Robert Schmidt, Joshua L. Heazlewood, Alexandra Jones, Daniel MacLean, Axel Nagel, Birgit Kersten, Waltraud X. Schulze	PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update.	Nucleic Acids Res.	2010	DBLP DOI BibTeX RDF
18	Steven J. Kiddle, Oliver P. F. Windram, Stuart McHattie, Andrew Meade, Jim Beynon, Vicky Buchanan-Wollaston, Katherine J. Denby, Sach Mukherjee	Temporal clustering by affinity propagation reveals transcriptional modules in Arabidopsis thaliana.	Bioinform.	2010	DBLP DOI BibTeX RDF
18	Max Sajitz-Hermstein, Zoran Nikoloski	A novel approach for determining environment-specific protein costs: the case of Arabidopsis thaliana.	Bioinform.	2010	DBLP DOI BibTeX RDF
18	Hesam T. Dashti, Jernej Tonejc, Adel Ardalan, Alireza F. Siahpirani, Sabrina Guettes, Zohreh Sharif, Liya Wang, Amir H. Assadi	Applications of Machine Learning Methods to Quantifying Phenotypic Traits that Distinguish the Wild Type from the Mutant Arabidopsis Thaliana Seedlings during Root Gravitropism	CoRR	2010	DBLP BibTeX RDF
18	Omodele Ibraheem, Christiaan E. J. Botha, Graeme Bradley	In silico analysis of cis-acting regulatory elements in 5' regulatory regions of sucrose transporter gene families in rice (Oryza sativa Japonica) and Arabidopsis thaliana.	Comput. Biol. Chem.	2010	DBLP DOI BibTeX RDF
18	Kerstin Kaufmann, Masao Nagasaki, Ruy Jáuregui	Modelling the Molecular Interactions in the Flower Developmental Network of Arabidopsis thaliana.	Silico Biol.	2010	DBLP DOI BibTeX RDF
18	Hyojin Kang, Eunkyoo Oh, Giltsu Choi, Doheon Lee	Genome-wide DNA-binding specificity of PIL5, an Arabidopsis basic Helix-Loop-Helix (bHLH) transcription factor.	Int. J. Data Min. Bioinform.	2010	DBLP DOI BibTeX RDF
18	Ana Pop, Curtis Huttenhower, Anjali Iyer-Pascuzzi, Philip N. Benfey, Olga G. Troyanskaya	Integrated functional networks of process, tissue, and developmental stage specific interactions in Arabidopsis thaliana.	BMC Syst. Biol.	2010	DBLP DOI BibTeX RDF
18	Simon van Mourik, Aalt D. J. van Dijk, Maarten de Gee, Richard G. H. Immink, Kerstin Kaufmann, Gerco C. Angenent, Roeland C. H. J. van Ham, Jaap Molenaar	Continuous-time modeling of cell fate determination in Arabidopsis flowers.	BMC Syst. Biol.	2010	DBLP DOI BibTeX RDF
18	Elizabeth Allen, Annick Moing, Timothy M. D. Ebbels, Mickaël Maucourt, A. Deri Tomos, Dominique Rolin, Mark A. Hooks	Correlation Network Analysis reveals a sequential reorganization of metabolic and transcriptional states during germination and gene-metabolite relationships in developing seedlings of Arabidopsis.	BMC Syst. Biol.	2010	DBLP DOI BibTeX RDF
18	Eugenio Azpeitia, Mariana Benítez, Iliusi Vega, Carlos Villarreal, Elena R. Álvarez-Buylla	Single-cell and coupled GRN models of cell patterning in the Arabidopsis thaliana root stem cell niche.	BMC Syst. Biol.	2010	DBLP DOI BibTeX RDF
18	Mariana Obertello, Gabriel Krouk, Manpreet S. Katari, Suzan J. Runko, Gloria M. Coruzzi	Modeling the global effect of the basic-leucine zipper transcription factor 1 (bZIP1) on nitrogen and light regulation in Arabidopsis.	BMC Syst. Biol.	2010	DBLP DOI BibTeX RDF
18	Gyan Prakash Srivastava, Ping Li, Jingdong Liu, Dong Xu 0002	Identification of transcription factor's targets using tissue-specific transcriptomic data in Arabidopsis thaliana.	BMC Syst. Biol.	2010	DBLP DOI BibTeX RDF
18	Harin Kanani, Bhaskar Dutta, Maria I. Klapa	Individual vs. combinatorial effect of elevated CO2 conditions and salinity stress on Arabidopsis thaliana liquid cultures: Comparing the early molecular response using time-series transcriptomic and metabolomic analyses.	BMC Syst. Biol.	2010	DBLP DOI BibTeX RDF
18	Oben M. Tataw, Min Liu 0008, Amit K. Roy-Chowdhury, Ram Kishor Yadav, G. Venugopala Reddy	Pattern analysis of stem cell growth dynamics in the shoot apex of arabidopsis.	ICIP	2010	DBLP DOI BibTeX RDF
18	Hesam T. Dashti, Jernej Tonejc, Adel Ardalan, Alireza F. Siahpirani, Sabrina Guettes, Zohreh Sharif, Liya Wang, Amir H. Assadi	Applications of Machine Learning Methods to Quantifying Phenotypic Traits that Distinguish the Wild Type from the Mutant Arabidopsis Thaliana Seedlings during Root Gravitropism.	BIOCOMP	2010	DBLP BibTeX RDF
18	Rachel Caldwell, Jinda Kongcharoen, Yan-Xia Lin, Ren Zhang 0002	The Length Distributions of Non-coding and Coding Sequences in Relation to Gene Expression: A Study on Arabidopsis thaliana.	BIOCOMP	2010	DBLP BibTeX RDF
18	Marek Schikora, Adam Schikora, Karl-Heinz Kogel, Wolfgang Koch 0001, Daniel Cremers	Probabilistic Classification of Disease symptoms caused by Salmonella on Arabidopsis Plants.	GI Jahrestagung (2)	2010	DBLP BibTeX RDF
18	Alain B. Tchagang, Heather Shearer, Sieu Phan, Hugo Bérubé, Fazel Famili, Pierre R. Fobert, Youlian Pan	Towards a temporal modeling of the genetic network controlling Systemic Acquired Resistance in Arabidopsis thaliana.	CIBCB	2010	DBLP DOI BibTeX RDF
18	Youlian Pan, Alain B. Tchagang, Hugo Bérubé, Sieu Phan, Heather Shearer, Ziying Liu, Pierre R. Fobert, Fazel Famili	Integrative Data Mining in Functional Genomics of Brassica napus and Arabidopsis thaliana.	IEA/AIE (3)	2010	DBLP DOI BibTeX RDF
18	Jonas De Vylder, Filip Rooms, Wilfried Philips	Segmentation of Cell Nuclei in Arabidopsis Thaliana Roots.	ICIAR (2)	2010	DBLP DOI BibTeX RDF
18	Pedro Quelhas, Ana Maria Mendonça, Aurélio C. Campilho	Optical Flow Based Arabidopsis Thaliana Root Meristem Cell Division Detection.	ICIAR (2)	2010	DBLP DOI BibTeX RDF
18	Xi Li, Dianhui Wang	Mining Regulatory Elements in Non-coding Regions of Arabidopsis thaliana.	CSBio	2010	DBLP DOI BibTeX RDF
18	Jia Jia, Qingzhong Xue	Codon Usage Biases of Transposable Elements and Host Nuclear Genes in Arabidopsis thaliana and Oryza sativa.	Genom. Proteom. Bioinform.	2009	DBLP DOI BibTeX RDF
18	Dandan Song, Yang Yang 0030, Bin Yu, Binglian Zheng, Zhidong Deng, Bao-Liang Lu, Xuemei Chen, Tao Jiang 0001	Computational prediction of novel non-coding RNAs in Arabidopsis thaliana.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
18	Marcelo M. Brandão, Luiza L. Dantas, Marcio C. Silva-Filho	AtPIN: Arabidopsis thaliana Protein Interaction Network.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
18	Quan Wang 0004, Lin Wan, Dayong Li, Lihuang Zhu, Minping Qian, Minghua Deng	Searching for bidirectional promoters in Arabidopsis thaliana.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
18	Damion Nero, Manpreet S. Katari, Jonathan Kelfer, Daniel Tranchina, Gloria M. Coruzzi	In Silico Evaluation of Predicted Regulatory Interactions in Arabidopsis thaliana.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
18	Linyong Mao, John L. Van Hemert, Sudhansu Dash, Julie A. Dickerson	Arabidopsis gene co-expression network and its functional modules.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
18	Stephen O. Opiyo, Etsuko N. Moriyama	Mining the Arabidopsis and rice genomes for cyclophilin protein families.	Int. J. Bioinform. Res. Appl.	2009	DBLP DOI BibTeX RDF
18	Artem Lysenko, Matthew Morritt Hindle, Jan Taubert, Mansoor A. S. Saqi, Christopher J. Rawlings	Data integration for plant genomics - exemplars from the integration of Arabidopsis thaliana databases.	Briefings Bioinform.	2009	DBLP DOI BibTeX RDF
18	Takeshi Obayashi, Shinpei Hayashi, Motoshi Saeki, Hiroyuki Ohta, Kengo Kinoshita	ATTED-II provides coexpressed gene networks for Arabidopsis.	Nucleic Acids Res.	2009	DBLP DOI BibTeX RDF
18	Kengo Kinoshita, Takeshi Obayashi	Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis.	Bioinform.	2009	DBLP DOI BibTeX RDF
18	Je-Gun Joung, Zhangjun Fei	Identification of microRNA regulatory modules in Arabidopsis via a probabilistic graphical model.	Bioinform.	2009	DBLP DOI BibTeX RDF
18	Angelica Lindlöf, Marcus Bräutigam, Aakash Chawade, Olof Olsson, Björn Olsson	In silico analysis of promoter regions from cold-induced genes in rice (Oryza sativa L.) and Arabidopsis thaliana reveals the importance of combinatorial control.	Bioinform.	2009	DBLP DOI BibTeX RDF
18	Monica Marcuzzo, Pedro Quelhas, Ana Campilho, Ana Maria Mendonça, Aurélio J. C. Campilho	Automated Arabidopsis plant root cell segmentation based on SVM classification and region merging.	Comput. Biol. Medicine	2009	DBLP DOI BibTeX RDF
18	Sandra Andorf, Tanja Gärtner, Matthias Steinfath, Hanna Witucka-Wall, Thomas Altmann, Dirk Repsilber	Towards Systems Biology of Heterosis: A Hypothesis about Molecular Network Structure Applied for the Arabidopsis Metabolome.	EURASIP J. Bioinform. Syst. Biol.	2009	DBLP DOI BibTeX RDF
18	Gabriel Krouk, Daniel Tranchina, Laurence Lejay, Alexis A. Cruikshank, Dennis E. Shasha, Gloria M. Coruzzi, Rodrigo A. Gutiérrez	A Systems Approach Uncovers Restrictions for Signal Interactions Regulating Genome-wide Responses to Nutritional Cues in Arabidopsis.	PLoS Comput. Biol.	2009	DBLP DOI BibTeX RDF
18	Osnat Atias, Benny Chor, Daniel A. Chamovitz	Large-scale analysis of Arabidopsis transcription reveals a basal co-regulation network.	BMC Syst. Biol.	2009	DBLP DOI BibTeX RDF
18	Chris J. Needham, Iain W. Manfield, Andrew J. Bulpitt, Philip M. Gilmartin, David R. Westhead	From gene expression to gene regulatory networks in Arabidopsis thaliana.	BMC Syst. Biol.	2009	DBLP DOI BibTeX RDF
18	José Díaz, Elena R. Álvarez-Buylla	Information flow during gene activation by signaling molecules: ethylene transduction in Arabidopsis cells as a study system.	BMC Syst. Biol.	2009	DBLP DOI BibTeX RDF
18	Le Lu 0005, Jinming Li	A combinatorial approach to determine the context-dependent role in transcriptional and posttranscriptional regulation in Arabidopsis thaliana.	BMC Syst. Biol.	2009	DBLP DOI BibTeX RDF
18	Robert Bensch, Olaf Ronneberger, Bettina Greese, Christian Fleck 0001, Katja Wester, Martin Hülskamp, Hans Burkhardt	Image Analysis of Arabidopsis Trichome Patterning in 4D Confocal Datasets.	ISBI	2009	DBLP DOI BibTeX RDF
18	Michael Seifert, Ali Banaei, Jens Keilwagen, Michael Florian Mette, Andreas Houben, François Roudier, Vincent Colot, Ivo Grosse, Marc Strickert	Array-based Genome Comparison of Arabidopsis Ecotypes using Hidden Markov Models.	BIOSIGNALS	2009	DBLP BibTeX RDF
18	Ines Hamdi, Mohamed Ben Ahmed	Spatio-temporal modeling and simulating the dynamic of genetic regulatory networks: case of arabidopsis Thaliana plant.	IADIS AC (2)	2009	DBLP BibTeX RDF
18	Lin Wang, Fumiaki Katagiri, Jane Glazebrook	Arabidopsis defense response against Pseudomonas syringae - Effects of major regulatory genes and the impact of coronatine.	GENSiPS	2009	DBLP DOI BibTeX RDF
18	Yi Jia, Jun Huan	The Analysis of Arabidopsis thaliana Circadian Network Based on Non-stationary DBNs Approach with Flexible Time Lag Choosing Mechanism.	BIBM	2009	DBLP DOI BibTeX RDF
18	Daniel L. Mace	Automated Microscopy and High Throughput Image Analysis in Arabidopsis and Drosophila.		2009	RDF
18	Joshua L. Heazlewood, Pawel Durek, Jan Hummel, Joachim Selbig, Wolfram Weckwerth, Dirk Walther 0001, Waltraud X. Schulze	PhosPhAt: a database of phosphorylation sites in Arabidopsis thaliana and a plant-specific phosphorylation site predictor.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
18	Séverine Gagnot, Jean-Philippe Tamby, Marie-Laure Martin-Magniette, Frédérique Bitton, Ludivine Taconnat, Sandrine Balzergue, Sébastien Aubourg, Jean-Pierre Renou, Alain Lecharny, Véronique Brunaud	CATdb: a public access to Arabidopsis transcriptome data from the URGV-CATMA platform.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
18	Tyler W. H. Backman, Christopher M. Sullivan, Jason S. Cumbie, Zachary A. Miller, Elisabeth J. Chapman, Noah Fahlgren, Scott A. Givan, James C. Carrington, Kristin D. Kasschau	Update of ASRP: the Arabidopsis Small RNA Project database.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
18	Jian Cui, Peng Li, Guang Li, Feng Xu, Chen Zhao, Yuhua Li, Zhongnan Yang, Guang Wang, Qingbo Yu, Yi-Xue Li, Tieliu Shi	AtPID: Arabidopsis thaliana protein interactome database - an integrative platform for plant systems biology.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
18	David Swarbreck, Christopher Wilks, Philippe Lamesch, Tanya Z. Berardini, Margarita Garcia-Hernandez, Hartmut Foerster, Donghui Li, Tom Meyer, Robert J. Muller, Larry Ploetz, Amie Radenbaugh, Shanker Singh, Vanessa Swing, Christophe Tissier, Peifen Zhang, Eva Huala	The Arabidopsis Information Resource (TAIR): gene structure and function annotation.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
18	Ananyo Choudhury, Ansuman Lahiri	Arabidopsis thaliana regulatory element analyzer.	Bioinform.	2008	DBLP DOI BibTeX RDF
18	Adaya N. Cohen, Samuel Bocobza, Isana Veksler, Idan Gabdank, Danny Barash, Asaph Aharoni, Michal Shapira, Klara Kedem	Computational Identification of Three-Way Junctions in Folded RNAs: A Case Study in Arabidopsis.	Silico Biol.	2008	DBLP BibTeX RDF
18	Minseo Park, Deane L. Falcone, Karen M. Daniels	Detection and prediction of alternative splicing in Arabidopsis thaliana.	Int. J. Comput. Biol. Drug Des.	2008	DBLP DOI BibTeX RDF
18	Karen E. Thum, Michael J. Shin, Rodrigo A. Gutiérrez, Indrani Mukherjee, Manpreet S. Katari, Damion Nero, Dennis E. Shasha, Gloria M. Coruzzi	An integrated genetic, genomic and systems approach defines gene networks regulated by the interaction of light and carbon signaling pathways in Arabidopsis.	BMC Syst. Biol.	2008	DBLP DOI BibTeX RDF
18	Mariana Benítez, Carlos Espinosa-Soto, Pablo Padilla-Longoria, Elena R. Álvarez-Buylla	Interlinked nonlinear subnetworks underlie the formation of robust cellular patterns in Arabidopsis epidermis: a dynamic spatial model.	BMC Syst. Biol.	2008	DBLP DOI BibTeX RDF
18	Pooya Sobhe Bidari, Roozbeh Manshaei, Tahmineh Lohrasebi, Amir Feizi, Mohammad Ali Malboobi, Javad Alirezaie	Time series gene expression data clustering and pattern extraction in Arabidopsis thaliana phosphatase-encoding genes.	BIBE	2008	DBLP DOI BibTeX RDF
18	Rachel Caldwell, Yan-Xia Lin, Ren Zhang 0002	Correlations of Length Distributions between Non-coding and Coding Sequences of Arabidopsis thaliana.	BIBM	2008	DBLP DOI BibTeX RDF
18	Hyojin Kang, Eunkyoo Oh, Giltsu Choi, Doheon Lee	Genome-Wide DNA-Binding Specificity of PIL5, a Arabidopsis Basic Helix-Loop-Helix (bHLH) Transcription Factor.	BIBM	2008	DBLP DOI BibTeX RDF
18	Anthony J. Bagnall, Simon Moxon, David J. Studholme, Vincent Moulton	Time Series Data Mining Algorithms for Identifying Short RNA in Arabidopsis thaliana.	BIOCOMP	2008	DBLP BibTeX RDF
18	Viktoria Gontcharova, Eun Youn, Casey R. Richardson, Chuck Morton, Manoj Pratim Samanta, Qingjun Luo, Chris Rock	Feature Evaluation of the Support Vector Machine for micro-RNA Target Site Prediction in Arabidopsis thaliana.	BCBGC	2008	DBLP BibTeX RDF
18	Jacques Demongeot, Michel Morvan, Sylvain Sené	Impact of Fixed Boundary Conditions on the Basins of Attraction in the Flower's Morphogenesis of Arabidopsis Thaliana.	AINA Workshops	2008	DBLP DOI BibTeX RDF
18	Gert Sclep, Joke Allemeersch, Robin Liechti, Björn De Meyer, Jim Beynon, Rishikesh Bhalerao, Yves Moreau, Wilfried Nietfeld, Jean-Pierre Renou, Philippe Reymond, Martin T. R. Kuiper, Pierre Hilson	CATMA, a comprehensive genome-scale resource for silencing and transcript profiling of Arabidopsis genes.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
18	Hui Lan, Rachel Carson, Nicholas J. Provart, Anthony J. Bonner	Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
18	Mihaela Pertea, Stephen M. Mount, Steven L. Salzberg	A computational survey of candidate exonic splicing enhancer motifs in the model plant Arabidopsis thaliana.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
18	Henning Redestig, Daniel Weicht, Joachim Selbig, Matthew A. Hannah	Transcription factor target prediction using multiple short expression time series from Arabidopsis thaliana.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
18	Michael C. Riley, Amanda Clare, Ross D. King	Locational distribution of gene functional classes in Arabidopsis thaliana.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
18	Yong Li 0011, Mario G. Rosso, Prisca Viehoever, Bernd Weisshaar	GABI-Kat SimpleSearch: an Arabidopsis thaliana T-DNA mutant database with detailed information for confirmed insertions.	Nucleic Acids Res.	2007	DBLP DOI BibTeX RDF
18	Joshua L. Heazlewood, Robert E. Verboom, Julian Tonti-Filippini, Ian Small, A. Harvey Millar	SUBA: the Arabidopsis Subcellular Database.	Nucleic Acids Res.	2007	DBLP DOI BibTeX RDF
18	Takeshi Obayashi, Kengo Kinoshita, Kenta Nakai, Masayuki Shibaoka, Shinpei Hayashi, Motoshi Saeki, Daisuke Shibata, Kazuki Saito, Hiroyuki Ohta	ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis.	Nucleic Acids Res.	2007	DBLP DOI BibTeX RDF
18	Huazong Zeng, Lijun Luo, Weixiong Zhang, Jie Zhou, Zuofeng Li, Hongyan Liu, Tiansheng Zhu, Xiangqian Feng, Yang Zhong	PlantQTL-GE: a database system for identifying candidate genes in rice and Arabidopsis by gene expression and QTL information.	Nucleic Acids Res.	2007	DBLP DOI BibTeX RDF