Search results for "DNA"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
1	Ján Manuch, Chris Thachuk, Ladislav Stacho, Anne Condon	NP-Completeness of the Direct Energy Barrier Problem without Pseudoknots.	DNA	2009	DBLP DOI BibTeX RDF
1	Steven M. Kautz, James I. Lathrop	Self-assembly of the Discrete Sierpinski Carpet and Related Fractals.	DNA	2009	DBLP DOI BibTeX RDF
1	Aaron D. Sterling	Distributed Agreement in Tile Self-assembly.	DNA	2009	DBLP DOI BibTeX RDF
1	M. Leigh Fanning, Joanne Macdonald, Darko Stefanovic	Advancing the Deoxyribozyme-Based Logic Gate Design Process.	DNA	2009	DBLP DOI BibTeX RDF
1	Ibuki Kawamata, Fumiaki Tanaka, Masami Hagiya	Automatic Design of DNA Logic Gates Based on Kinetic Simulation.	DNA	2009	DBLP DOI BibTeX RDF
1	Ya Meng, Navin Kashyap	The Effect of Malformed Tiles on Tile Assemblies within kTAM.	DNA	2009	DBLP DOI BibTeX RDF
1	Yoko Sakai, Yoriko Mawatari, Kiyonari Yamasaki, Ko-ichiroh Shohda, Akira Suyama	Construction of AND Gate for RTRACS with the Capacity of Extension to NAND Gate.	DNA	2009	DBLP DOI BibTeX RDF	molecular computer, logic gate
1	Luca Cardelli	Strand Algebras for DNA Computing.	DNA	2009	DBLP DOI BibTeX RDF
1	Ashish Goel, Morteza Ibrahimi	Renewable, Time-Responsive DNA Logic Gates for Scalable Digital Circuits.	DNA	2009	DBLP DOI BibTeX RDF
1	John H. Reif, Urmi Majumder	Isothermal Reactivating Whiplash PCR for Locally Programmable Molecular Computation.	DNA	2008	DBLP DOI BibTeX RDF
1	Sean Williams, Kyle Lund, Chenxiang Lin, Peter Wonka, Stuart Lindsay, Hao Yan	Tiamat: A Three-Dimensional Editing Tool for Complex DNA Structures.	DNA	2008	DBLP DOI BibTeX RDF	Structural DNA nanotechnology, DNA tile, 3D DNA structure display, DNA sequence design
1	Oscar H. Ibarra, Andrei Paun, Alfonso Rodríguez-Patón	Sequentiality Induced by Spike Number in SNP Systems.	DNA	2008	DBLP DOI BibTeX RDF
1	Suguru Kawashimo, Yen Kaow Ng, Hirotaka Ono 0001, Kunihiko Sadakane, Masafumi Yamashita	Speeding Up Local-Search Type Algorithms for Designing DNA Sequences under Thermodynamical Constraints.	DNA	2008	DBLP DOI BibTeX RDF	Statistical Thermodynamical Constraints, Local Search, DNA Sequence Design
1	Fumiaki Tanaka, Takashi Tsuda, Masami Hagiya	Towards DNA Comparator: The Machine That Compares DNA Concentrations.	DNA	2008	DBLP DOI BibTeX RDF
1	Stanislav Angelov, Sanjeev Khanna, Mirkó Visontai	Robust Self-assembly of Graphs.	DNA	2008	DBLP DOI BibTeX RDF
1	Yusuke Nakagawa, Katsuyuki Yugi, Kenji Tsuge, Mitsuhiro Itaya, Hiroshi Yanagawa, Yasubumi Sakakibara	Operon Structure Optimization by Random Self-assembly.	DNA	2008	DBLP DOI BibTeX RDF
1	Chris Luhrs	Polyomino-Safe DNA Self-assembly via Block Replacement.	DNA	2008	DBLP DOI BibTeX RDF
1	Max H. Garzon, Hao Yan (eds.)	DNA Computing, 13th International Meeting on DNA Computing, DNA13, Memphis, TN, USA, June 4-8, 2007, Revised Selected Papers	DNA	2008	DBLP DOI BibTeX RDF
1	Lulu Qian, Erik Winfree	A Simple DNA Gate Motif for Synthesizing Large-Scale Circuits.	DNA	2008	DBLP DOI BibTeX RDF
1	Yuriy Brun, Dustin Reishus	Connecting the Dots: Molecular Machinery for Distributed Robotics.	DNA	2008	DBLP DOI BibTeX RDF
1	Florent Becker, Eric Rémila, Nicolas Schabanel	Time Optimal Self-assembly for 2D and 3D Shapes: The Case of Squares and Cubes.	DNA	2008	DBLP DOI BibTeX RDF	Time Optimal Construction, 2D and 3D Discrete Geometry, Tilings, Self-assembling
1	Xingguo Liang, Hidenori Nishioka, Nobutaka Takenaka, Hiroyuki Asanuma	Construction of Photon-Fueled DNA Nanomachines by Tethering Azobenzenes as Engines.	DNA	2008	DBLP DOI BibTeX RDF	DNA nanomachine, azobenzene, photoregulation, hybridization
1	David Soloveichik, Georg Seelig, Erik Winfree	DNA as a Universal Substrate for Chemical Kinetics.	DNA	2008	DBLP DOI BibTeX RDF
1	Ken Komiya, Masayuki Yamamura, John A. Rose	Experimental Validation of Signal Dependent Operation in Whiplash PCR.	DNA	2008	DBLP DOI BibTeX RDF
1	Matthew J. Patitz, Scott M. Summers	Self-assembly of Discrete Self-similar Fractals.	DNA	2008	DBLP DOI BibTeX RDF
1	Tetsuro Kitajima, Masahiro Takinoue, Ko-ichiroh Shohda, Akira Suyama	Design of Code Words for DNA Computers and Nanostructures with Consideration of Hybridization Kinetics.	DNA	2007	DBLP DOI BibTeX RDF
1	Suguru Kawashimo, Hirotaka Ono 0001, Kunihiko Sadakane, Masafumi Yamashita	Dynamic Neighborhood Searches for Thermodynamically Designing DNA Sequence.	DNA	2007	DBLP DOI BibTeX RDF	DNA Sequence Design Algorithm, Statistical Thermodynamical Constraints, Local Search
1	Elizabeth Goode, William DeLorbe	DNA Splicing Systems.	DNA	2007	DBLP DOI BibTeX RDF	splicing systems, limit languages, differential eqs, DNA
1	Atsushi Kameda, Satoshi Kashiwamura, Masahito Yamamoto, Azuma Ohuchi, Masami Hagiya	Combining Randomness and a High-Capacity DNA Memory.	DNA	2007	DBLP DOI BibTeX RDF	DNA memory, DNA ink, randomness, molecular memory
1	Erik D. Demaine, Martin L. Demaine, Sándor P. Fekete, Mashhood Ishaque, Eynat Rafalin, Robert T. Schweller, Diane L. Souvaine	Staged Self-assembly: Nanomanufacture of Arbitrary Shapes with O (1) Glues.	DNA	2007	DBLP DOI BibTeX RDF
1	Arkadii G. D'yachkov, Anthony J. Macula, Vyacheslav V. Rykov, Vladimir Ufimtsev	DNA Codes Based on Stem Similarities Between DNA Sequences.	DNA	2007	DBLP DOI BibTeX RDF
1	Lila Kari, Kalpana Mahalingam	Watson-Crick Conjugate and Commutative Words.	DNA	2007	DBLP DOI BibTeX RDF
1	Abraham Gutiérrez, Luis Fernández, Fernando Arroyo, Santiago Alonso	Hardware and Software Architecture for Implementing Membrane Systems: A Case of Study to Transition P Systems.	DNA	2007	DBLP DOI BibTeX RDF	Transition P System, Software architecture, Hardware implementations, Natural Computing
1	Miki Hirabayashi, Hirotada Ohashi, Tai Kubo	Experimental Validation of the Transcription-Based Diagnostic Automata with Quantitative Control by Programmed Molecules.	DNA	2007	DBLP DOI BibTeX RDF	nucleic acid detection systems, molecular programming, autonomous diagnostic devices, molecular circuits, DNA computing, Biomolecular computing
1	Akio Nishikawa, Satsuki Yaegashi, Kazumasa Ohtake, Masami Hagiya	Multi-fueled Approach to DNA Nano-Robotics.	DNA	2007	DBLP DOI BibTeX RDF	DNA nano-robotics, multi-fueled approach, thermal fuel, pH fuel, light fuel, azobenzene, i-motif
1	Qinru Qiu, Prakash Mukre, Morgan Bishop, Daniel J. Burns, Qing Wu 0002	Hardware Acceleration for Thermodynamic Constrained DNA Code Generation.	DNA	2007	DBLP DOI BibTeX RDF
1	Ashish Goel, Pablo Moisset de Espanés	Toward Minimum Size Self-Assembled Counters.	DNA	2007	DBLP DOI BibTeX RDF
1	David Spetzler, Fusheng Xiong, Wayne D. Frasch	Heuristic Solution to a 10-City Asymmetric Traveling Salesman Problem Using Probabilistic DNA Computing.	DNA	2007	DBLP DOI BibTeX RDF	Ligation, Denaturing PAGE, Magnetic affinity, Traveling Salesman Problem, Hybridization, DNA computing
1	Clifford R. Johnson	Modeling Non-specific Binding in Gel-Based DNA Computers.	DNA	2007	DBLP DOI BibTeX RDF
1	Hiroyuki Sekiguchi, Ken Komiya, Daisuke Kiga, Masayuki Yamamura	A Realization of DNA Molecular Machine That Walks Autonomously by Using a Restriction Enzyme.	DNA	2007	DBLP DOI BibTeX RDF
1	Urmi Majumder, Thomas H. LaBean, John H. Reif	Activatable Tiles: Compact, Robust Programmable Assembly and Other Applications.	DNA	2007	DBLP DOI BibTeX RDF	DNA-assembly, error-correction, molecular computation
1	Bo Cui, Stavros Konstantinidis	DNA Coding Using the Subword Closure Operation.	DNA	2007	DBLP DOI BibTeX RDF
1	Vincenzo Manca	Discrete Simulations of Biochemical Dynamics.	DNA	2007	DBLP DOI BibTeX RDF	Metabolism, Discrete Biological Models, P Systems
1	Benedek Nagy	On 5' --> 3' Sensing Watson-Crick Finite Automata.	DNA	2007	DBLP DOI BibTeX RDF
1	Michael Domaratzki	Equivalence in Template-Guided Recombination.	DNA	2007	DBLP DOI BibTeX RDF
1	Ken Komiya, Noriko Hirayama, Masayuki Yamamura	An Interface for a Computing Model Using Methylation to Allow Precise Population Control by Quantitative Monitoring.	DNA	2007	DBLP DOI BibTeX RDF
1	John H. Reif, Sudheer Sahu	Autonomous Programmable Nanorobotic Devices Using DNAzymes.	DNA	2007	DBLP DOI BibTeX RDF
1	Artiom Alhazov, Ion Petre, Vladimir Rogojin	Solutions to Computational Problems Through Gene Assembly.	DNA	2007	DBLP DOI BibTeX RDF
1	Koutaro Somei, Shohei Kaneda, Teruo Fujii, Satoshi Murata	Stepwise Assembly of DNA Tile on Surfaces.	DNA	2007	DBLP DOI BibTeX RDF	DNA tile, stepwise assembly, microfluidic device, self-assembly
1	Yuriy Brun	Constant-Size Tileset for Solving an NP-Complete Problem in Nondeterministic Linear Time.	DNA	2007	DBLP DOI BibTeX RDF
1	Naoki Iimura, Masahito Yamamoto, Fumiaki Tanaka, Azuma Ohuchi	Sequence Design Support System for 4 × 4 DNA Tiles.	DNA	2007	DBLP DOI BibTeX RDF
1	Angela M. Pagano, Susannah Gal	An Approach for Using Modified Nucleotides in Aqueous DNA Computing.	DNA	2007	DBLP DOI BibTeX RDF
1	Masahito Yamamoto, Satoshi Kashiwamura, Azuma Ohuchi	DNA Memory with 16.8M Addresses.	DNA	2007	DBLP DOI BibTeX RDF	DNA memory, NPMM, Theoretical capacity, DNA Computing
1	Marc García-Arnau, Daniel Manrique, Alfonso Rodríguez-Patón, Petr Sosík	Towards a Robust Biocomputing Solution of Intractable Problems.	DNA	2007	DBLP DOI BibTeX RDF	Incremental Strategy, DNA Computing, NP-Complete problem, Membrane Computing, Maximum Clique Problem
1	Matteo Cavaliere, Ömer Egecioglu, Oscar H. Ibarra, Mihai Ionescu, Gheorghe Paun, Sara Woodworth	Asynchronous Spiking Neural P Systems: Decidability and Undecidability.	DNA	2007	DBLP DOI BibTeX RDF
1	Suguru Kawashimo, Hirotaka Ono 0001, Kunihiko Sadakane, Masafumi Yamashita	DNA Sequence Design by Dynamic Neighborhood Searches.	DNA	2006	DBLP DOI BibTeX RDF	Combinatorial Constraints, Variable Depth Search, Local Search, Variable Neighborhood Search, DNA Sequence Design
1	Lucian Ilie, Liviu Tinta, Cristian Popescu, Kathleen A. Hill	Viral Genome Compression.	DNA	2006	DBLP DOI BibTeX RDF	viral genomes, genome compression, overlapping genes, shortest common superstring problem, lower bounds, exact algorithms, viruses, approximate solutions
1	Alessandra Carbone, Niles A. Pierce (eds.)	DNA Computing, 11th International Workshop on DNA Computing, DNA11, London, ON, Canada, June 6-9, 2005. Revised Selected Papers.	DNA	2006	DBLP DOI BibTeX RDF
1	Lila Kari, Kalpana Mahalingam	DNA Codes and Their Properties.	DNA	2006	DBLP DOI BibTeX RDF
1	Erzsébet Csuhaj-Varjú, Sergey Verlan	Length-Separating Test Tube Systems.	DNA	2006	DBLP DOI BibTeX RDF
1	Byoung-Tak Zhang, Joo-Kyung Kim	DNA Hypernetworks for Information Storage and Retrieval.	DNA	2006	DBLP DOI BibTeX RDF
1	Clifford R. Johnson	Automating the DNA Computer: Solving n-Variable 3-SAT Problems.	DNA	2006	DBLP DOI BibTeX RDF
1	Joseph Ibershoff, Jerzy W. Jaromczyk, Danny van Noort	Simulations of Microreactors: The Order of Things.	DNA	2006	DBLP DOI BibTeX RDF
1	Nevenka Dimitrova, Susannah Gal	MethyLogic: Implementation of Boolean Logic Using DNA Methylation.	DNA	2006	DBLP DOI BibTeX RDF
1	Natasa Jonoska, Gregory L. McColm, Ana Staninska	Spectrum of a Pot for DNA Complexes.	DNA	2006	DBLP DOI BibTeX RDF
1	Mihai Ionescu, Andrei Paun, Gheorghe Paun, Mario J. Pérez-Jiménez	Computing with Spiking Neural P Systems: Traces and Small Universal Systems.	DNA	2006	DBLP DOI BibTeX RDF
1	Urmi Majumder, Sudheer Sahu, Thomas H. LaBean, John H. Reif	Design and Simulation of Self-repairing DNA Lattices.	DNA	2006	DBLP DOI BibTeX RDF
1	Masahito Yamamoto, Yutaka Kita, Satoshi Kashiwamura, Atsushi Kameda, Azuma Ohuchi	Development of DNA Relational Database and Data Manipulation Experiments.	DNA	2006	DBLP DOI BibTeX RDF
1	William Thies, John Paul Urbanski, Todd Thorsen, Saman P. Amarasinghe	Abstraction Layers for Scalable Microfluidic Biocomputers.	DNA	2006	DBLP DOI BibTeX RDF
1	Florin Manea, Carlos Martín-Vide, Victor Mitrana	All NP-Problems Can Be Solved in Polynomial Time by Accepting Networks of Splicing Processors of Constant Size.	DNA	2006	DBLP DOI BibTeX RDF
1	Atsushi Kameda, Masahito Yamamoto, Azuma Ohuchi, Satsuki Yaegashi, Masami Hagiya	Unravel Four Hairpins!	DNA	2006	DBLP DOI BibTeX RDF
1	Zuwairie Ibrahim, John A. Rose, Yusei Tsuboi, Osamu Ono, Marzuki Khalid	A New Readout Approach in DNA Computing Based on Real-Time PCR with TaqMan Probes.	DNA	2006	DBLP DOI BibTeX RDF
1	Petr Sosík, Alfonso Rodríguez-Patón	P Systems with Active Membranes Characterize PSPACE.	DNA	2006	DBLP DOI BibTeX RDF
1	Lucian Ilie, Roberto Solis-Oba	Gene Assembly Algorithms for Ciliates.	DNA	2006	DBLP DOI BibTeX RDF	stichotrichs, gene assembly, dlad-first greedy strategy, algorithm, ciliates
1	Kiranchand V. Bobba, Andrew Neel, Vinhthuy T. Phan, Max H. Garzon	"Reasoning" and "Talking" DNA: Can DNA Understand English?	DNA	2006	DBLP DOI BibTeX RDF	Semantic analysis and information retrieval, DNA chips and microarrays, sensitivy analysis, data classification and discrimination, question answering
1	Masashi Shiozaki, Hirotaka Ono 0001, Kunihiko Sadakane, Masafumi Yamashita	A Probabilistic Model of the DNA Conformational Change.	DNA	2006	DBLP DOI BibTeX RDF
1	Tseren-Onolt Ishdorj	Minimal Parallelism for Polarizationless P Systems.	DNA	2006	DBLP DOI BibTeX RDF
1	Bryan Wei, Zhengyu Wang, Yongli Mi	Uniquimer: A de Novo DNA Sequence Generation Computer Software for DNA Self-assembly.	DNA	2006	DBLP DOI BibTeX RDF
1	Sudheer Sahu, John H. Reif	Capabilities and Limits of Compact Error Resilience Methods for Algorithmic Self-assembly in Two and Three Dimensions.	DNA	2006	DBLP DOI BibTeX RDF
1	Max H. Garzon, Vinhthuy T. Phan, Sujoy Roy, Andrew Neel	In Search of Optimal Codes for DNA Computing.	DNA	2006	DBLP DOI BibTeX RDF	Word design, encoding data on DNA, fault-tolerant DNA computing, maximal code sets, complex DNA self-assembly, shuffle codes, Gibbs energy
1	Stanislav Angelov, Sanjeev Khanna, Mirkó Visontai	On the Complexity of Graph Self-assembly in Accretive Systems.	DNA	2006	DBLP DOI BibTeX RDF
1	Yuliy M. Baryshnikov, Edward G. Coffman Jr., Boonsit Yimwadsana	On Times to Compute Shapes in 2D Tile Self-assembly.	DNA	2006	DBLP DOI BibTeX RDF
1	Michael Domaratzki	Hairpin Structures Defined by DNA Trajectories.	DNA	2006	DBLP DOI BibTeX RDF
1	Sudheer Sahu, Bei Wang 0001, John H. Reif	A Framework for Modeling DNA Based Molecular Systems.	DNA	2006	DBLP DOI BibTeX RDF
1	John A. Rose, Ken Komiya, Satsuki Yaegashi, Masami Hagiya	Displacement Whiplash PCR: Optimized Architecture and Experimental Validation.	DNA	2006	DBLP DOI BibTeX RDF
1	Chengde Mao, Takashi Yokomori (eds.)	DNA Computing, 12th International Meeting on DNA Computing, DNA12, Seoul, Korea, June 5-9, 2006, Revised Selected Papers	DNA	2006	DBLP DOI BibTeX RDF
1	Don Jyh-Fu Jeng, Junzo Watada, Berlin Wu, Jui-Yu Wu	Fuzzy Forecasting with DNA Computing.	DNA	2006	DBLP DOI BibTeX RDF
1	Rui Shogenji, Naoya Tate, Taro Beppu, Yusuke Ogura, Jun Tanida	Local Area Manipulation of DNA Molecules for Photonic DNA Memory.	DNA	2006	DBLP DOI BibTeX RDF
1	Thomas Keef	A Mathematical Approach to Cross-Linked Structures in Viral Capsids: Predicting the Architecture of Novel Containers for Drug Delivery.	DNA	2006	DBLP DOI BibTeX RDF
1	Ken Komiya, Satsuki Yaegashi, Masami Hagiya, Akira Suyama, John A. Rose	Experimental Validation of the Statistical Thermodynamic Model for Prediction of the Behavior of Autonomous Molecular Computers Based on DNA Hairpin Formation.	DNA	2006	DBLP DOI BibTeX RDF
1	Naoki Iimura, Masahito Yamamoto, Fumiaki Tanaka, Atsushi Kameda, Azuma Ohuchi	Sequence Design for Stable DNA Tiles.	DNA	2006	DBLP DOI BibTeX RDF
1	Sudheer Sahu, Peng Yin 0003, John H. Reif	A Self-assembly Model of Time-Dependent Glue Strength.	DNA	2005	DBLP DOI BibTeX RDF
1	Claudio Ferretti, Giancarlo Mauri, Claudio Zandron (eds.)	DNA Computing, 10th International Workshop on DNA Computing, DNA 10, Milan, Italy, June 7-10, 2004, Revised Selected Papers	DNA	2005	DBLP DOI BibTeX RDF
1	Peng Yin 0003, Sudheer Sahu, Andrew J. Turberfield, John H. Reif	Design of Autonomous DNA Cellular Automata.	DNA	2005	DBLP DOI BibTeX RDF
1	Joseph Farfel, Darko Stefanovic	Towards Practical Biomolecular Computers Using Microfluidic Deoxyribozyme Logic Gate Networks.	DNA	2005	DBLP DOI BibTeX RDF
1	Mark Daley, Ian McQuillan	On Computational Properties of Template-Guided DNA Recombination.	DNA	2005	DBLP DOI BibTeX RDF
1	Pierluigi Frisco, Christiaan V. Henkel, Szabolcs Tengely	An Algorithm for SAT Without an Extraction Phase.	DNA	2005	DBLP DOI BibTeX RDF
1	Byoung-Tak Zhang, Ha-Young Jang	Molecular Learning of wDNF Formulae.	DNA	2005	DBLP DOI BibTeX RDF
1	Junna Kuramochi, Yasubumi Sakakibara	Intensive In Vitro Experiments of Implementing and Executing Finite Automata in Test Tube.	DNA	2005	DBLP DOI BibTeX RDF
1	Max H. Garzon, Vinhthuy T. Phan, Kiran C. Bobba, Raghuver Kontham	Sensitivity and Capacity of Microarray Encodings.	DNA	2005	DBLP DOI BibTeX RDF	h-distance, DNA chips, genomic analysis, classification and discrimination, data mining, fault-tolerant computing, microarrays, Data representation, Gibbs energy

Publications at "DNA"( http://dblp.L3S.de/Venues/DNA )