Search results for "DNA-computing"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
27	Maryam S. Nuser, Russell J. Deaton	Simulations of DNA Computing with In Vitro Selection.	Genet. Program. Evolvable Mach.	2003	DBLP DOI BibTeX RDF	DNA word design, in vitro selection, simulation, DNA computing
27	David Harlan Wood	DNA computing capabilities for game theory.	Nat. Comput.	2003	DBLP DOI BibTeX RDF	game theory, DNA computing
27	D. Rooß	Recent Developments in DNA-Computing.	ISMVL	1997	DBLP DOI BibTeX RDF	test tubes, time complexity, DNA-computing, DNA, space complexity, Hamiltonian path problem, theoretical computer science
27	Zuwairie Ibrahim, Tri Basuki Kurniawan, Marzuki Khalid	A DNA sequence design for molecular computation of HPP with output visualization based on real-time PCR.	IEEE Congress on Evolutionary Computation	2007	DBLP DOI BibTeX RDF
27	Junzo Watada	DNA Computing and its Application.	Computational Intelligence: A Compendium	2008	DBLP DOI BibTeX RDF
27	Ikno Kim, Don Jyh-Fu Jeng, Junzo Watada	Analysing the Density of Subgroups in Valued Relationships Based on DNA Computing.	KES (3)	2006	DBLP DOI BibTeX RDF
25	Erik Winfree	Toward molecular programming with DNA.	ASPLOS	2008	DBLP DOI BibTeX RDF	molecular programming, DNA
25	Aili Han	RLM: A New Method of Encoding Weights in DNA Strands.	HIS	2006	DBLP DOI BibTeX RDF
25	Max H. Garzon, Russell J. Deaton	Codeword design and information encoding in DNA ensembles.	Nat. Comput.	2004	DBLP DOI BibTeX RDF	codeword design, DNA space dimension, h-distance, information encoding in DNA, template method, tensor product, partition function, Gibbs energy, DNA-based computing
25	Julia Khodor, David K. Gifford	Programmed Mutagenesis Is Universal.	Theory Comput. Syst.	2002	DBLP DOI BibTeX RDF
25	Zuwairie Ibrahim, John A. Rose, Akira Suyama, Marzuki Khalid	Experimental implementation and analysis of a DNA computing readout method based on real-time PCR with TaqMan probes.	Nat. Comput.	2008	DBLP DOI BibTeX RDF	Graduated PCR, Readout method, Real-time PCR, TaqMan probes, DNA computation, Hamiltonian path problem
25	Wenbin Liu, Xiangou Zhu	Template Frame for DNA Computing.	ICIC (3)	2006	DBLP DOI BibTeX RDF
23	Max H. Garzon, Hao Yan (eds.)	DNA Computing, 13th International Meeting on DNA Computing, DNA13, Memphis, TN, USA, June 4-8, 2007, Revised Selected Papers	DNA	2008	DBLP DOI BibTeX RDF
23	Tetsuro Kitajima, Masahiro Takinoue, Ko-ichiroh Shohda, Akira Suyama	Design of Code Words for DNA Computers and Nanostructures with Consideration of Hybridization Kinetics.	DNA	2007	DBLP DOI BibTeX RDF
23	Suguru Kawashimo, Hirotaka Ono 0001, Kunihiko Sadakane, Masafumi Yamashita	Dynamic Neighborhood Searches for Thermodynamically Designing DNA Sequence.	DNA	2007	DBLP DOI BibTeX RDF	DNA Sequence Design Algorithm, Statistical Thermodynamical Constraints, Local Search
23	Elizabeth Goode, William DeLorbe	DNA Splicing Systems.	DNA	2007	DBLP DOI BibTeX RDF	splicing systems, limit languages, differential eqs, DNA
23	Atsushi Kameda, Satoshi Kashiwamura, Masahito Yamamoto, Azuma Ohuchi, Masami Hagiya	Combining Randomness and a High-Capacity DNA Memory.	DNA	2007	DBLP DOI BibTeX RDF	DNA memory, DNA ink, randomness, molecular memory
23	Erik D. Demaine, Martin L. Demaine, Sándor P. Fekete, Mashhood Ishaque, Eynat Rafalin, Robert T. Schweller, Diane L. Souvaine	Staged Self-assembly: Nanomanufacture of Arbitrary Shapes with O (1) Glues.	DNA	2007	DBLP DOI BibTeX RDF
23	Abraham Gutiérrez, Luis Fernández, Fernando Arroyo, Santiago Alonso	Hardware and Software Architecture for Implementing Membrane Systems: A Case of Study to Transition P Systems.	DNA	2007	DBLP DOI BibTeX RDF	Transition P System, Software architecture, Hardware implementations, Natural Computing
23	Akio Nishikawa, Satsuki Yaegashi, Kazumasa Ohtake, Masami Hagiya	Multi-fueled Approach to DNA Nano-Robotics.	DNA	2007	DBLP DOI BibTeX RDF	DNA nano-robotics, multi-fueled approach, thermal fuel, pH fuel, light fuel, azobenzene, i-motif
23	Ashish Goel, Pablo Moisset de Espanés	Toward Minimum Size Self-Assembled Counters.	DNA	2007	DBLP DOI BibTeX RDF
23	Clifford R. Johnson	Modeling Non-specific Binding in Gel-Based DNA Computers.	DNA	2007	DBLP DOI BibTeX RDF
23	Hiroyuki Sekiguchi, Ken Komiya, Daisuke Kiga, Masayuki Yamamura	A Realization of DNA Molecular Machine That Walks Autonomously by Using a Restriction Enzyme.	DNA	2007	DBLP DOI BibTeX RDF
23	Urmi Majumder, Thomas H. LaBean, John H. Reif	Activatable Tiles: Compact, Robust Programmable Assembly and Other Applications.	DNA	2007	DBLP DOI BibTeX RDF	DNA-assembly, error-correction, molecular computation
23	Bo Cui, Stavros Konstantinidis	DNA Coding Using the Subword Closure Operation.	DNA	2007	DBLP DOI BibTeX RDF
23	Vincenzo Manca	Discrete Simulations of Biochemical Dynamics.	DNA	2007	DBLP DOI BibTeX RDF	Metabolism, Discrete Biological Models, P Systems
23	Benedek Nagy	On 5' --> 3' Sensing Watson-Crick Finite Automata.	DNA	2007	DBLP DOI BibTeX RDF
23	Michael Domaratzki	Equivalence in Template-Guided Recombination.	DNA	2007	DBLP DOI BibTeX RDF
23	Ken Komiya, Noriko Hirayama, Masayuki Yamamura	An Interface for a Computing Model Using Methylation to Allow Precise Population Control by Quantitative Monitoring.	DNA	2007	DBLP DOI BibTeX RDF
23	John H. Reif, Sudheer Sahu	Autonomous Programmable Nanorobotic Devices Using DNAzymes.	DNA	2007	DBLP DOI BibTeX RDF
23	Artiom Alhazov, Ion Petre, Vladimir Rogojin	Solutions to Computational Problems Through Gene Assembly.	DNA	2007	DBLP DOI BibTeX RDF
23	Koutaro Somei, Shohei Kaneda, Teruo Fujii, Satoshi Murata	Stepwise Assembly of DNA Tile on Surfaces.	DNA	2007	DBLP DOI BibTeX RDF	DNA tile, stepwise assembly, microfluidic device, self-assembly
23	Yuriy Brun	Constant-Size Tileset for Solving an NP-Complete Problem in Nondeterministic Linear Time.	DNA	2007	DBLP DOI BibTeX RDF
23	Naoki Iimura, Masahito Yamamoto, Fumiaki Tanaka, Azuma Ohuchi	Sequence Design Support System for 4 × 4 DNA Tiles.	DNA	2007	DBLP DOI BibTeX RDF
23	Matteo Cavaliere, Ömer Egecioglu, Oscar H. Ibarra, Mihai Ionescu, Gheorghe Paun, Sara Woodworth	Asynchronous Spiking Neural P Systems: Decidability and Undecidability.	DNA	2007	DBLP DOI BibTeX RDF
23	Alessandra Carbone, Niles A. Pierce (eds.)	DNA Computing, 11th International Workshop on DNA Computing, DNA11, London, ON, Canada, June 6-9, 2005. Revised Selected Papers.	DNA	2006	DBLP DOI BibTeX RDF
23	Chengde Mao, Takashi Yokomori (eds.)	DNA Computing, 12th International Meeting on DNA Computing, DNA12, Seoul, Korea, June 5-9, 2006, Revised Selected Papers	DNA	2006	DBLP DOI BibTeX RDF
23	Suguru Kawashimo, Hirotaka Ono 0001, Kunihiko Sadakane, Masafumi Yamashita	DNA Sequence Design by Dynamic Neighborhood Searches.	DNA	2006	DBLP DOI BibTeX RDF	Combinatorial Constraints, Variable Depth Search, Local Search, Variable Neighborhood Search, DNA Sequence Design
23	Lucian Ilie, Liviu Tinta, Cristian Popescu, Kathleen A. Hill	Viral Genome Compression.	DNA	2006	DBLP DOI BibTeX RDF	viral genomes, genome compression, overlapping genes, shortest common superstring problem, lower bounds, exact algorithms, viruses, approximate solutions
23	Erzsébet Csuhaj-Varjú, Sergey Verlan	Length-Separating Test Tube Systems.	DNA	2006	DBLP DOI BibTeX RDF
23	Byoung-Tak Zhang, Joo-Kyung Kim	DNA Hypernetworks for Information Storage and Retrieval.	DNA	2006	DBLP DOI BibTeX RDF
23	Clifford R. Johnson	Automating the DNA Computer: Solving n-Variable 3-SAT Problems.	DNA	2006	DBLP DOI BibTeX RDF
23	Nevenka Dimitrova, Susannah Gal	MethyLogic: Implementation of Boolean Logic Using DNA Methylation.	DNA	2006	DBLP DOI BibTeX RDF
23	Natasa Jonoska, Gregory L. McColm, Ana Staninska	Spectrum of a Pot for DNA Complexes.	DNA	2006	DBLP DOI BibTeX RDF
23	Mihai Ionescu, Andrei Paun, Gheorghe Paun, Mario J. Pérez-Jiménez	Computing with Spiking Neural P Systems: Traces and Small Universal Systems.	DNA	2006	DBLP DOI BibTeX RDF
23	Urmi Majumder, Sudheer Sahu, Thomas H. LaBean, John H. Reif	Design and Simulation of Self-repairing DNA Lattices.	DNA	2006	DBLP DOI BibTeX RDF
23	Masahito Yamamoto, Yutaka Kita, Satoshi Kashiwamura, Atsushi Kameda, Azuma Ohuchi	Development of DNA Relational Database and Data Manipulation Experiments.	DNA	2006	DBLP DOI BibTeX RDF
23	William Thies, John Paul Urbanski, Todd Thorsen, Saman P. Amarasinghe	Abstraction Layers for Scalable Microfluidic Biocomputers.	DNA	2006	DBLP DOI BibTeX RDF
23	Florin Manea, Carlos Martín-Vide, Victor Mitrana	All NP-Problems Can Be Solved in Polynomial Time by Accepting Networks of Splicing Processors of Constant Size.	DNA	2006	DBLP DOI BibTeX RDF
23	Atsushi Kameda, Masahito Yamamoto, Azuma Ohuchi, Satsuki Yaegashi, Masami Hagiya	Unravel Four Hairpins!	DNA	2006	DBLP DOI BibTeX RDF
23	Lucian Ilie, Roberto Solis-Oba	Gene Assembly Algorithms for Ciliates.	DNA	2006	DBLP DOI BibTeX RDF	stichotrichs, gene assembly, dlad-first greedy strategy, algorithm, ciliates
23	Kiranchand V. Bobba, Andrew Neel, Vinhthuy T. Phan, Max H. Garzon	"Reasoning" and "Talking" DNA: Can DNA Understand English?	DNA	2006	DBLP DOI BibTeX RDF	Semantic analysis and information retrieval, DNA chips and microarrays, sensitivy analysis, data classification and discrimination, question answering
23	Tseren-Onolt Ishdorj	Minimal Parallelism for Polarizationless P Systems.	DNA	2006	DBLP DOI BibTeX RDF
23	Bryan Wei, Zhengyu Wang, Yongli Mi	Uniquimer: A de Novo DNA Sequence Generation Computer Software for DNA Self-assembly.	DNA	2006	DBLP DOI BibTeX RDF
23	Sudheer Sahu, John H. Reif	Capabilities and Limits of Compact Error Resilience Methods for Algorithmic Self-assembly in Two and Three Dimensions.	DNA	2006	DBLP DOI BibTeX RDF
23	Stanislav Angelov, Sanjeev Khanna, Mirkó Visontai	On the Complexity of Graph Self-assembly in Accretive Systems.	DNA	2006	DBLP DOI BibTeX RDF
23	Yuliy M. Baryshnikov, Edward G. Coffman Jr., Boonsit Yimwadsana	On Times to Compute Shapes in 2D Tile Self-assembly.	DNA	2006	DBLP DOI BibTeX RDF
23	Michael Domaratzki	Hairpin Structures Defined by DNA Trajectories.	DNA	2006	DBLP DOI BibTeX RDF
23	Sudheer Sahu, Bei Wang 0001, John H. Reif	A Framework for Modeling DNA Based Molecular Systems.	DNA	2006	DBLP DOI BibTeX RDF
23	John A. Rose, Ken Komiya, Satsuki Yaegashi, Masami Hagiya	Displacement Whiplash PCR: Optimized Architecture and Experimental Validation.	DNA	2006	DBLP DOI BibTeX RDF
23	Rui Shogenji, Naoya Tate, Taro Beppu, Yusuke Ogura, Jun Tanida	Local Area Manipulation of DNA Molecules for Photonic DNA Memory.	DNA	2006	DBLP DOI BibTeX RDF
23	Thomas Keef	A Mathematical Approach to Cross-Linked Structures in Viral Capsids: Predicting the Architecture of Novel Containers for Drug Delivery.	DNA	2006	DBLP DOI BibTeX RDF
23	Ken Komiya, Satsuki Yaegashi, Masami Hagiya, Akira Suyama, John A. Rose	Experimental Validation of the Statistical Thermodynamic Model for Prediction of the Behavior of Autonomous Molecular Computers Based on DNA Hairpin Formation.	DNA	2006	DBLP DOI BibTeX RDF
23	Naoki Iimura, Masahito Yamamoto, Fumiaki Tanaka, Atsushi Kameda, Azuma Ohuchi	Sequence Design for Stable DNA Tiles.	DNA	2006	DBLP DOI BibTeX RDF
23	Sudheer Sahu, Peng Yin 0003, John H. Reif	A Self-assembly Model of Time-Dependent Glue Strength.	DNA	2005	DBLP DOI BibTeX RDF
23	Joseph Farfel, Darko Stefanovic	Towards Practical Biomolecular Computers Using Microfluidic Deoxyribozyme Logic Gate Networks.	DNA	2005	DBLP DOI BibTeX RDF
23	Mark Daley, Ian McQuillan	On Computational Properties of Template-Guided DNA Recombination.	DNA	2005	DBLP DOI BibTeX RDF
23	Pierluigi Frisco, Christiaan V. Henkel, Szabolcs Tengely	An Algorithm for SAT Without an Extraction Phase.	DNA	2005	DBLP DOI BibTeX RDF
23	Byoung-Tak Zhang, Ha-Young Jang	Molecular Learning of wDNF Formulae.	DNA	2005	DBLP DOI BibTeX RDF
23	Junna Kuramochi, Yasubumi Sakakibara	Intensive In Vitro Experiments of Implementing and Executing Finite Automata in Test Tube.	DNA	2005	DBLP DOI BibTeX RDF
23	Max H. Garzon, Vinhthuy T. Phan, Kiran C. Bobba, Raghuver Kontham	Sensitivity and Capacity of Microarray Encodings.	DNA	2005	DBLP DOI BibTeX RDF	h-distance, DNA chips, genomic analysis, classification and discrimination, data mining, fault-tolerant computing, microarrays, Data representation, Gibbs energy
23	Hirotaka Nakagawa, Kensaku Sakamoto, Yasubumi Sakakibara	Development of an In Vivo Computer Based on Escherichia coli.	DNA	2005	DBLP DOI BibTeX RDF
23	Kaoru Onodera, Takashi Yokomori	Linearizer and Doubler : Two Mappings to Unify Molecular Computing Models Based on DNA Complementarity.	DNA	2005	DBLP DOI BibTeX RDF
23	Koutaro Somei, Shohei Kaneda, Teruo Fujii, Satoshi Murata	A Microfluidic Device for DNA Tile Self-assembly.	DNA	2005	DBLP DOI BibTeX RDF
23	David Soloveichik, Erik Winfree	Complexity of Compact Proofreading for Self-assembled Patterns.	DNA	2005	DBLP DOI BibTeX RDF
23	Tsutomu Takeda, Hirotaka Ono 0001, Kunihiko Sadakane, Masafumi Yamashita	A Local Search Based Barrier Height Estimation Algorithm for DNA Molecular Transitions.	DNA	2005	DBLP DOI BibTeX RDF
23	Jennifer A. Sager, Darko Stefanovic	Designing Nucleotide Sequences for Computation: A Survey of Constraints.	DNA	2005	DBLP DOI BibTeX RDF
23	Oscar H. Ibarra, Sara Woodworth	On Bounded Symport/Antiport P Systems.	DNA	2005	DBLP DOI BibTeX RDF
23	Oscar H. Ibarra, Andrei Paun	Counting Time in Computing with Cells.	DNA	2005	DBLP DOI BibTeX RDF
23	Shankara Narayanan Krishna	Communicating Distributed H Systems: Optimal Results with Efficient Ways of Communication.	DNA	2005	DBLP DOI BibTeX RDF
23	Yuliy M. Baryshnikov, Edward G. Coffman Jr., Nadrian C. Seeman, Teddy Yimwadsana	Self-correcting Self-assembly: Growth Models and the Hammersley Process.	DNA	2005	DBLP DOI BibTeX RDF
23	John H. Reif, Sudheer Sahu, Peng Yin 0003	Complexity of Graph Self-assembly in Accretive Systems and Self-destructible Systems.	DNA	2005	DBLP DOI BibTeX RDF
23	Yusuke Ogura, Taro Beppu, Masahiro Takinoue, Akira Suyama, Jun Tanida	Control of DNA Molecules on a Microscopic Bead Using Optical Techniques for Photonic DNA Memory.	DNA	2005	DBLP DOI BibTeX RDF
23	Dario Pescini, Daniela Besozzi, Claudio Zandron, Giancarlo Mauri	Analysis and Simulation of Dynamics in Probabilistic P Systems.	DNA	2005	DBLP DOI BibTeX RDF
23	Danny van Noort	A Poor Man's Microfluidic DNA Computer.	DNA	2005	DBLP DOI BibTeX RDF	DNA hybridisation and denaturing, finemachining, Perspex®, Delrin®, automation, microfluidics
23	Bernard Yurke, David C. Lin, Noshir A. Langrana	Use of DNA Nanodevices in Modulating the Mechanical Properties of Polyacrylamide Gels.	DNA	2005	DBLP DOI BibTeX RDF
23	Fumiaki Tanaka, Atsushi Kameda, Masahito Yamamoto, Azuma Ohuchi	Specificity of Hybridization Between DNA Sequences Based on Free Energy.	DNA	2005	DBLP DOI BibTeX RDF
23	Natasa Jonoska, Gregory L. McColm, Ana Staninska	Expectation and Variance of Self-assembled Graph Structures.	DNA	2005	DBLP DOI BibTeX RDF
23	Lila Kari, Stavros Konstantinidis, Elena Losseva, Petr Sosík, Gabriel Thierrin	Hairpin Structures in DNA Words.	DNA	2005	DBLP DOI BibTeX RDF
23	Matteo Cavaliere, Natasa Jonoska, Peter Leupold	Recognizing DNA Splicing.	DNA	2005	DBLP DOI BibTeX RDF
23	Bei Wang 0001, Dimitris Papamichail, Steffen Mueller, Steven Skiena	Two Proteins for the Price of One: The Design of Maximally Compressed Coding Sequences.	DNA	2005	DBLP DOI BibTeX RDF
23	Keiichiro Takahashi, Satsuki Yaegashi, Hiroyuki Asanuma, Masami Hagiya	Photo- and Thermoregulation of DNA Nanomachines.	DNA	2005	DBLP DOI BibTeX RDF
23	Tero Harju, Ion Petre, Vladimir Rogojin, Grzegorz Rozenberg	Simple Operations for Gene Assembly.	DNA	2005	DBLP DOI BibTeX RDF
23	Rohani Binti Abu Bakar, Junzo Watada	Biological Clustering Method for Logistic Place Decision Making.	KES (3)	2008	DBLP DOI BibTeX RDF	Logistic problem, Logistic location, cluster-based, Determination, DNA computing, Biologically inspired computing
23	Danny van Noort, John S. McCaskill	Flows in micro fluidic networks: From theory to experiment.	Nat. Comput.	2004	DBLP DOI BibTeX RDF	DNA selection, microtechnolgy, DNA computing, microfluidics, flow simulations
21	Arto Salomaa	DNA Complementarity and Paradigms of Computing.	COCOON	2002	DBLP DOI BibTeX RDF
20	Ho-Lin Chen, Constantine G. Evans (eds.)	29th International Conference on DNA Computing and Molecular Programming, DNA 2023, September 11-15, 2023, Tohoku University, Sendai, Japan	DNA	2023	DBLP BibTeX RDF
20		Front Matter, Table of Contents, Preface, Conference Organization.	DNA	2023	DBLP DOI BibTeX RDF
20	Hannah Amelie Earley	Reversible Bond Logic.	DNA	2023	DBLP DOI BibTeX RDF
20	Robert M. Alaniz, Josh Brunner, Michael J. Coulombe, Erik D. Demaine, Jenny Diomidova, Timothy Gomez, Elise Grizzell, Ryan Knobel, Jayson Lynch, Andrew Rodriguez, Robert T. Schweller, Tim Wylie	Complexity of Reconfiguration in Surface Chemical Reaction Networks.	DNA	2023	DBLP DOI BibTeX RDF