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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 54 occurrences of 52 keywords
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Results
Found 488 publication records. Showing 476 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
19 | Ming Xiao, Jiakun Li, Song Hong, Yongtao Yang, Junhua Li, Jianxin Wang 0001, Jian Yang 0009, Wenbiao Ding, Le Zhang 0004 |
K-mer Counting: memory-efficient strategy, parallel computing and field of application for Bioinformatics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018, Madrid, Spain, December 3-6, 2018, pp. 2561-2567, 2018, IEEE Computer Society, 978-1-5386-5488-0. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
19 | Rick Wertenbroek, Yann Thoma |
k-mer Counting with FPGAs and HMC In-Memory Operations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
AHS ![In: 2018 NASA/ESA Conference on Adaptive Hardware and Systems, AHS 2018, Edinburgh, United Kingdom, August 6-9, 2018, pp. 233-240, 2018, IEEE, 978-1-5386-7753-7. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
19 | Huiren Li, Anand Ramachandran 0001, Deming Chen |
GPU Acceleration of Advanced k-mer Counting for Computational Genomics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ASAP ![In: 29th IEEE International Conference on Application-specific Systems, Architectures and Processors, ASAP 2018, Milano, Italy, July 10-12, 2018, pp. 1-4, 2018, IEEE Computer Society, 978-1-5386-7479-6. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
19 | Tony C. Pan, Sanchit Misra, Srinivas Aluru |
Optimizing high performance distributed memory parallel hash tables for DNA k-mer counting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SC ![In: Proceedings of the International Conference for High Performance Computing, Networking, Storage, and Analysis, SC 2018, Dallas, TX, USA, November 11-16, 2018, pp. 11:1-11:13, 2018, IEEE / ACM. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP BibTeX RDF |
|
19 | Lawrence Buckingham, Shlomo Geva, James M. Hogan |
Protein database search using compressed k-mer vocabularies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ADCS ![In: Proceedings of the 23rd Australasian Document Computing Symposium, ADCS 2018, Dunedin, New Zealand, December 11-12, 2018, pp. 10:1-10:7, 2018, ACM, 978-1-4503-6549-9. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
19 | Beakal Gizachew Assefa, Öznur Özkasap |
MER-SDN: Machine Learning Framework for Traffic Aware Energy Efficient Routing in SDN. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DASC/PiCom/DataCom/CyberSciTech ![In: 2018 IEEE 16th Intl Conf on Dependable, Autonomic and Secure Computing, 16th Intl Conf on Pervasive Intelligence and Computing, 4th Intl Conf on Big Data Intelligence and Computing and Cyber Science and Technology Congress, DASC/PiCom/DataCom/CyberSciTech 2018, Athens, Greece, August 12-15, 2018, pp. 974-980, 2018, IEEE Computer Society, 978-1-5386-7518-2. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
19 | Sairam Behera, Sutanu Gayen, Jitender S. Deogun, N. V. Vinodchandran |
KmerEstimate: A Streaming Algorithm for Estimating k-mer Counts with Optimal Space Usage. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BCB ![In: Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2018, Washington, DC, USA, August 29 - September 01, 2018, pp. 438-447, 2018, ACM. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
19 | Marius Erbert, Steffen Rechner, Matthias Müller-Hannemann |
Gerbil: a fast and memory-efficient k-mer counter with GPU-support. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithms Mol. Biol. ![In: Algorithms Mol. Biol. 12(1), pp. 9:1-9:12, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Chang Sik Kim, Martyn D. Winn, Vipin Sachdeva, Kirk E. Jordan |
K-mer clustering algorithm using a MapReduce framework: application to the parallelization of the Inchworm module of Trinity. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 18(1), pp. 467, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Xuebing Wu, David P. Bartel |
kpLogo: positional k-mer analysis reveals hidden specificity in biological sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 45(Webserver-Issue), pp. W534-W538, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Marek Kokot, Maciej Dlugosz, Sebastian Deorowicz |
KMC 3: counting and manipulating k-mer statistics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(17), pp. 2759-2761, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | João F. Matias Rodrigues, Thomas S. B. Schmidt, Janko Tackmann, Christian von Mering |
MAPseq: highly efficient k-mer search with confidence estimates, for rRNA sequence analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(23), pp. 3808-3810, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Anuj Gupta, I King Jordan, Lavanya Rishishwar |
stringMLST: a fast k-mer based tool for multilocus sequence typing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(1), pp. 119-121, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Xu Min, Wanwen Zeng, Ning Chen 0002, Ting Chen 0006, Rui Jiang 0001 |
Chromatin accessibility prediction via convolutional long short-term memory networks with k-mer embedding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(14), pp. i92-i101, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Daniel Mapleson, Gonzalo Garcia Accinelli, George Kettleborough, Jonathan Wright, Bernardo J. Clavijo |
KAT: a K-mer analysis toolkit to quality control NGS datasets and genome assemblies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(4), pp. 574-576, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Jochen Kruppa, Erhard van der Vries, Wendy K. Jo, Alexander Postel, Paul Becher, Albert Osterhaus, Klaus Jung |
kmerPyramid: an interactive visualization tool for nucleobase and k-mer frequencies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(19), pp. 3115-3116, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Nicola Cadenelli, Jorda Polo, David Carrera 0001 |
Accelerating K-mer Frequency Counting with GPU and Non-Volatile Memory. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1712.03254, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
|
19 | Marek Kokot, Maciej Dlugosz, Sebastian Deorowicz |
KMC 3: counting and manipulating k-mer statistics. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1701.08022, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
|
19 | Ritambhara Singh, Arshdeep Sekhon, Kamran Kowsari, Jack Lanchantin, Beilun Wang, Yanjun Qi |
GaKCo: a Fast GApped k-mer string Kernel using COunting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1704.07468, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
|
19 | Freeson Kaniwa, Venu Madhav Kuthadi, Otlhapile Dinakenyane, Heiko Schroeder |
Space-efficient K-MER algorithm for generalized suffix tree. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1703.02224, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
|
19 | Richard Allen White III, Ajay Panyala, Kevin Glass, Sean Colby, Kurt R. Glaesemann, Christer Jansson, Janet K. Jansson |
MerCat: a versatile k-mer counter and diversity estimator for database-independent property analysis obtained from metagenomic and/or metatranscriptomic sequencing data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PeerJ Prepr. ![In: PeerJ Prepr. 5, pp. e2825, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Kevin D. Murray, Christfried Webers, Cheng Soon Ong, Justin O. Borevitz, Norman Warthmann |
kWIP: The k-mer weighted inner product, a de novo estimator of genetic similarity. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 13(9), 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Yaron Orenstein, David Pellow, Guillaume Marçais, Ron Shamir, Carl Kingsford |
Designing small universal k-mer hitting sets for improved analysis of high-throughput sequencing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 13(10), 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Elizabeth S. Allman, John A. Rhodes, Seth Sullivant |
Statistically Consistent k-mer Methods for Phylogenetic Tree Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 24(2), pp. 153-171, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | David Pellow, Darya Filippova, Carl Kingsford |
Improving Bloom Filter Performance on Sequence Data Using k-mer Bloom Filters. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 24(6), pp. 547-557, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Ritambhara Singh, Arshdeep Sekhon, Kamran Kowsari, Jack Lanchantin, Beilun Wang, Yanjun Qi |
GaKCo: A Fast Gapped k-mer String Kernel Using Counting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ECML/PKDD (1) ![In: Machine Learning and Knowledge Discovery in Databases - European Conference, ECML PKDD 2017, Skopje, Macedonia, September 18-22, 2017, Proceedings, Part I, pp. 356-373, 2017, Springer, 978-3-319-71248-2. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Yuchun Guo, Kevin Tian, Haoyang Zeng, David K. Gifford |
K-mer Set Memory (KSM) Motif Representation Enables Accurate Prediction of the Impact of Regulatory Variants. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology - 21st Annual International Conference, RECOMB 2017, Hong Kong, China, May 3-7, 2017, Proceedings, pp. 372-374, 2017, 978-3-319-56969-7. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
|
19 | Filippo Utro, Daniel E. Platt, Laxmi Parida |
A Quantitative and Qualitative Characterization of k-mer Based Alignment-Free Phylogeny Construction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CIBB ![In: Computational Intelligence Methods for Bioinformatics and Biostatistics - 14th International Meeting, CIBB 2017, Cagliari, Italy, September 7-9, 2017, Revised Selected Papers, pp. 19-31, 2017, Springer, 978-3-030-14159-2. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Nicola Cadenelli, Jorda Polo, David Carrera 0001 |
Accelerating K-mer Frequency Counting with GPU and Non-Volatile Memory. ![Search on Bibsonomy](Pics/bibsonomy.png) |
HPCC/SmartCity/DSS ![In: 19th IEEE International Conference on High Performance Computing and Communications; 15th IEEE International Conference on Smart City; 3rd IEEE International Conference on Data Science and Systems, HPCC/SmartCity/DSS 2017, Bangkok, Thailand, December 18-20, 2017, pp. 434-441, 2017, IEEE Computer Society, 978-1-5386-2588-0. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Nathaniel McVicar, Chih-Ching Lin, Scott Hauck |
K-Mer Counting Using Bloom Filters with an FPGA-Attached HMC. ![Search on Bibsonomy](Pics/bibsonomy.png) |
FCCM ![In: 25th IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, FCCM 2017, Napa, CA, USA, April 30 - May 2, 2017, pp. 203-210, 2017, IEEE Computer Society, 978-1-5386-4037-1. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Nguyen T. H. Nguyen, Ediz Cetin, Oliver Diessel |
Scheduling Considerations for Voter Checking in TMR-MER Systems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
FCCM ![In: 25th IEEE Annual International Symposium on Field-Programmable Custom Computing Machines, FCCM 2017, Napa, CA, USA, April 30 - May 2, 2017, pp. 30, 2017, IEEE Computer Society, 978-1-5386-4037-1. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Tao Gao, Yanfei Guo, Yanjie Wei, Bingqiang Wang, Yutong Lu, Pietro Cicotti, Pavan Balaji, Michela Taufer |
Bloomfish: A Highly Scalable Distributed K-mer Counting Framework. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICPADS ![In: 23rd IEEE International Conference on Parallel and Distributed Systems, ICPADS 2017, Shenzhen, China, December 15-17, 2017, pp. 170-179, 2017, IEEE Computer Society, 978-1-5386-2129-5. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Bartolomeo Sebastiani, Donatella Malfatti, Martino Giorgini, Stefano Falcinelli |
Determination of Volatile Aroma Composition Profiles of Coco de Mèr (Lodoicea Maldivica) Fruit: Analytical Study by HS-SPME and GC/MS Techniques. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCSA (3) ![In: Computational Science and Its Applications - ICCSA 2017 - 17th International Conference, Trieste, Italy, July 3-6, 2017, Proceedings, Part III, pp. 44-59, 2017, Springer, 978-3-319-62397-9. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
|
19 | Budhi Gunadharma Gautama |
Oil-spill monitoring in Indonesia. (L'observation de la nappe de pétrole à la mer d'Indonésie). ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2017 |
RDF |
|
19 | Peter Audano |
Scalable mapping-free algorithms and K-mer data structures for genomic analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2017 |
RDF |
|
19 | Tieyuan Pan, Li Zhu, Lian Zeng, Takahiro Watanabe, Yasuhiro Takashima |
An Online Task Placement Algorithm Based on MER Enumeration for Partially Reconfigurable Device. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEICE Trans. Fundam. Electron. Commun. Comput. Sci. ![In: IEICE Trans. Fundam. Electron. Commun. Comput. Sci. 99-A(7), pp. 1345-1354, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Maifuz Ali, Makoto Ando |
Fast Estimation of Field in the Shadow Zone for Finite Cylindrical Structures by Modified Edge Representation (MER) in Compact Range Communication. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEICE Trans. Commun. ![In: IEICE Trans. Commun. 99-B(7), pp. 1541-1549, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Tieyuan Pan, Lian Zeng, Yasuhiro Takashima, Takahiro Watanabe |
A Fast MER Enumeration Algorithm for Online Task Placement on Reconfigurable FPGAs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEICE Trans. Fundam. Electron. Commun. Comput. Sci. ![In: IEICE Trans. Fundam. Electron. Commun. Comput. Sci. 99-A(12), pp. 2412-2424, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Veronika B. Dubinkina, Dmitry S. Ischenko, Vladimir Ulyantsev, Alexander V. Tyakht, Dmitry G. Alexeev |
Assessment of k-mer spectrum applicability for metagenomic dissimilarity analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 17, pp. 38, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Gaëtan Benoit, Pierre Peterlongo, Mahendra Mariadassou, Erwan Drezen, Sophie Schbath, Dominique Lavenier, Claire Lemaitre |
Multiple comparative metagenomics using multiset k-mer counting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PeerJ Comput. Sci. ![In: PeerJ Comput. Sci. 2, pp. e94, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Ariya Shajii, Deniz Yörükoglu, Yun William Yu, Bonnie Berger |
Fast genotyping of known SNPs through approximate k-mer matching. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 32(17), pp. 538-544, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Abdullah-Al Mamun 0002, Soumitra Pal 0001, Sanguthevar Rajasekaran |
KCMBT: a k-mer Counter based on Multiple Burst Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 32(18), pp. 2783-2790, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Naveen Sivadasan, Rajgopal Srinivasan, Kshama Goyal |
Kmerlight: fast and accurate k-mer abundance estimation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1609.05626, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP BibTeX RDF |
|
19 | Marius Erbert, Steffen Rechner, Matthias Müller-Hannemann |
Gerbil: A Fast and Memory-Efficient k-mer Counter with GPU-Support. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1607.06618, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP BibTeX RDF |
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19 | Jose Nelson Perez Castillo, Miguel Gutierrez, Nelson Enrique Vera Parra |
Computational Performance Assessment of k-mer Counting Algorithms. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 23(4), pp. 248-255, 2016. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | David Pellow, Darya Filippova, Carl Kingsford |
Improving Bloom Filter Performance on Sequence Data Using k -mer Bloom Filters. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology - 20th Annual Conference, RECOMB 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings, pp. 137-151, 2016, Springer, 978-3-319-31956-8. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Elvismary Molina de Armas, Edward Hermann Haeusler, Sérgio Lifschitz, Maristela Terto de Holanda, Waldeyr Mendes Cordeiro da Silva, Paulo Cavalcanti Gomes Ferreira |
K-mer Mapping and de Bruijn graphs: The case for velvet fragment assembly. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2016, Shenzhen, China, December 15-18, 2016, pp. 882-889, 2016, IEEE Computer Society, 978-1-5090-1611-2. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Marius Erbert, Steffen Rechner, Matthias Müller-Hannemann |
Gerbil: A Fast and Memory-Efficient k-mer Counter with GPU-Support. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics - 16th International Workshop, WABI 2016, Aarhus, Denmark, August 22-24, 2016. Proceedings, pp. 150-161, 2016, Springer, 978-3-319-43680-7. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Yaron Orenstein, David Pellow, Guillaume Marçais, Ron Shamir, Carl Kingsford |
Compact Universal k-mer Hitting Sets. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: Algorithms in Bioinformatics - 16th International Workshop, WABI 2016, Aarhus, Denmark, August 22-24, 2016. Proceedings, pp. 257-268, 2016, Springer, 978-3-319-43680-7. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Tony Pan, Patrick Flick, Chirag Jain, Yongchao Liu, Srinivas Aluru |
Kmerind: A Flexible Parallel Library for K-mer Indexing of Biological Sequences on Distributed Memory Systems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BCB ![In: Proceedings of the 7th ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2016, Seattle, WA, USA, October 2-5, 2016, pp. 422-433, 2016, ACM, 978-1-4503-4225-4. The full citation details ...](Pics/full.jpeg) |
2016 |
DBLP DOI BibTeX RDF |
|
19 | Maïté Gouin |
Modélisation déterministe d'états de mer à grande échelle en profondeur variable. ( Numerical and deterministic modeling of wave propagation at large scale over a variable bathymetry). ![Search on Bibsonomy](Pics/bibsonomy.png) |
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2016 |
RDF |
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19 | Mohamed Benallal |
Analyse d'images satellitaires et développement d'outils informatiques pour modéliser le transfert de CO₂ à l'interface air-mer dans les régions subantarctique et antarctique (secteur Australien). (Remote sensing image Analysis and IT tools development for modeling the transfer of CO2 in the air-sea interface in the sub-Antarctic and Antarctic regions (Australian sector)). ![Search on Bibsonomy](Pics/bibsonomy.png) |
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2016 |
RDF |
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19 | Le Vinh, Tran Lang, Le Binh, Tran Hoai |
A two-phase binning algorithm using l-mer frequency on groups of non-overlapping reads. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithms Mol. Biol. ![In: Algorithms Mol. Biol. 10, pp. 2, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Weishu Gong |
Discussions on localization capabilities of MSL and MER rovers. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Ann. GIS ![In: Ann. GIS 21(1), pp. 69-79, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Maifuz Ali, Makoto Ando |
Fast Estimation of Shadowing Effects in Millimeter-Wave Short Range Communication by Modified Edge Representation (MER). ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEICE Trans. Commun. ![In: IEICE Trans. Commun. 98-B(9), pp. 1873-1881, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Hilde Vinje, Kristian Hovde Liland, Trygve Almøy, Lars Snipen |
Comparing K-mer based methods for improved classification of 16S sequences. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 16, pp. 205:1-205:13, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Rowan G. Zellers, Robert A. Drewell, Jacqueline M. Dresch |
MARZ: an algorithm to combinatorially analyze gapped n-mer models of transcription factor binding. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 16, pp. 30:1-30:14, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso |
A k-mer-based barcode DNA classification methodology based on spectral representation and a neural gas network. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Artif. Intell. Medicine ![In: Artif. Intell. Medicine 64(3), pp. 173-184, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Siavash Sheikhizadeh, Dick de Ridder |
ACE: accurate correction of errors using K-mer tries. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(19), pp. 3216-3218, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
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19 | Daniel Navarro-Gomez, Jeremy Leipzig, Lishuang Shen, Marie T. Lott, Alphons P. M. Stassen, Douglas C. Wallace, Janey L. Wiggs, Marni J. Falk, Mannis van Oven, Xiaowu Gai |
Phy-Mer: a novel alignment-free and reference-independent mitochondrial haplogroup classifier. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(8), pp. 1310-1312, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
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19 | Karel Brinda, Maciej Sykulski, Gregory Kucherov |
Spaced seeds improve k-mer-based metagenomic classification. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(22), pp. 3584-3592, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
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19 | Sebastian Deorowicz, Marek Kokot, Szymon Grabowski, Agnieszka Debudaj-Grabysz |
KMC 2: fast and resource-frugal k-mer counting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(10), pp. 1569-1576, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Reda Younsi, Dan MacLean |
Using 2k + 2 bubble searches to find single nucleotide polymorphisms in k-mer graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(5), pp. 642-646, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
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19 | Raffaele Giancarlo, Simona E. Rombo, Filippo Utro |
Epigenomic k-mer dictionaries: shedding light on how sequence composition influences in vivo nucleosome positioning. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 31(18), pp. 2939-2946, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Yang Li 0150, Xifeng Yan |
MSPKmerCounter: A Fast and Memory Efficient Approach for K-mer Counting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1505.06550, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP BibTeX RDF |
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19 | Rong-Jian Chen, Shi-Jinn Horng, Po-Hsian Huang |
Anti-forensic steganography using multi-bit MER with flexible bit location. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Int. J. Ad Hoc Ubiquitous Comput. ![In: Int. J. Ad Hoc Ubiquitous Comput. 18(1/2), pp. 54-66, 2015. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | A. K. M. Tauhidul Islam, Sakti Pramanik, Xinge Ji, James R. Cole, Qiang Zhu 0001 |
Back translated peptide K-mer search and local alignment in large DNA sequence databases using BoND-SD-tree indexing. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 15th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2015, Belgrade, Serbia, November 2-4, 2015, pp. 1-6, 2015, IEEE Computer Society, 978-1-4673-7983-0. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Xiaolei Wang, Wubin Qu, Chenggang Zhang, Dongsheng Zhao |
Kmer-indexer: A Fast K-mer Indexing Program. ![Search on Bibsonomy](Pics/bibsonomy.png) |
MedInfo ![In: MEDINFO 2015: eHealth-enabled Health - Proceedings of the 15th World Congress on Health and Biomedical Informatics, São Paulo, Brazil, 19-23 August 2015, pp. 1083, 2015, IOS Press, 978-1-61499-563-0. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Pui Kwan Fong, Nung Kion Lee |
Improved H3K27ac histone mark prediction using k-mer proximity feature. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CITA ![In: 9th International Conference on IT in Asia, CITA 2015, Sarawak, Kuching, Malaysia, August 4-5, 2015, pp. 1-6, 2015, IEEE, 978-1-4799-9939-2. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
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19 | Stefano Falcinelli, Marta Bettoni, Federico Giorgini, Martino Giorgini, Bartolomeo Sebastiani |
Chemical Characterization of "Coco de Mer" (Lodoicea Maldivica) Fruit: Phytosterols and Fatty Acids Composition. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCSA (2) ![In: Computational Science and Its Applications - ICCSA 2015 - 15th International Conference, Banff, AB, Canada, June 22-25, 2015, Proceedings, Part II, pp. 308-323, 2015, Springer, 978-3-319-21406-1. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Abdullah-Al Mamun 0002, Soumitra Pal 0001, Sanguthevar Rajasekaran |
Efficient techniques for k-mer counting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICCABS ![In: 5th IEEE International Conference on Computational Advances in Bio and Medical Sciences, ICCABS 2015, Miami, FL, USA, October 15-17, 2015, pp. 1, 2015, IEEE Computer Society, 978-1-4673-9663-9. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
|
19 | Michal Hozza, Tomás Vinar, Brona Brejová |
How Big is that Genome? Estimating Genome Size and Coverage from k-mer Abundance Spectra. ![Search on Bibsonomy](Pics/bibsonomy.png) |
SPIRE ![In: String Processing and Information Retrieval - 22nd International Symposium, SPIRE 2015, London, UK, September 1-4, 2015, Proceedings, pp. 199-209, 2015, Springer, 978-3-319-23825-8. The full citation details ...](Pics/full.jpeg) |
2015 |
DBLP DOI BibTeX RDF |
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19 | Marie Piazza |
Influence des petites échelles océaniques associées au Gulf Stream sur les interactions air-mer et impact sur la variabilité atmosphérique de l'Atlantique Nord. (Influence of oceanic small-scale variability associated with the Gulf Stream on air-sea interactions and impact on North Atlantic atmospheric variability). ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2015 |
RDF |
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19 | Weiming Li, Bin Ma 0002, Kaizhong Zhang |
Optimizing Spaced $k$-mer Neighbors for Efficient Filtration in Protein Similarity Search. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 11(2), pp. 398-406, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
19 | John Healy, Desmond Chambers |
Approximate k-Mer Matching UsingFuzzy Hash Maps. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 11(1), pp. 258-264, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
19 | Aimin Li, Junying Zhang, Zhongyin Zhou |
PLEK: a tool for predicting long non-coding RNAs and messenger RNAs based on an improved k-mer scheme. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 15, pp. 311, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Daniel Langenkämper, Alexander Goesmann, Tim W. Nattkemper |
AKE - the Accelerated k-mer Exploration web-tool for rapid taxonomic classification and visualization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 15, pp. 384, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Wentian Li, Jan Freudenberg, Pedro Miramontes |
Diminishing Return for Increased Mappability with Longer Sequencing Reads: Implications of the k-mer Distributions in the Human Genome. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 15, pp. 2, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Saikat Chatterjee, David Koslicki, Siyuan Dong, Nicolas Innocenti, Lu Cheng 0004, Yueheng Lan, Mikko Vehkaperä, Mikael Skoglund, Lars K. Rasmussen, Erik Aurell, Jukka Corander |
SEK: sparsity exploiting k-mer-based estimation of bacterial community composition. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 30(17), pp. 2423-2431, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
19 | Rayan Chikhi, Paul Medvedev |
Informed and automated k-mer size selection for genome assembly. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 30(1), pp. 31-37, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Páll Melsted, Bjarni V. Halldórsson |
KmerStream: streaming algorithms for k-mer abundance estimation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 30(24), pp. 3541-3547, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Peter Audano, Fredrik Vannberg |
KAnalyze: a fast versatile pipelined K-mer toolkit. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 30(14), pp. 2070-2072, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Seyed Basir Shariat Razavi, Narjes Sadat Movahedi Tabrizi, Hamidreza Chitsaz, Christina Boucher |
HyDA-Vista: Towards Optimal Guided Selection of k-mer Size for Sequence Assembly. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1408.5592, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP BibTeX RDF |
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19 | Sebastian Deorowicz, Marek Kokot, Szymon Grabowski, Agnieszka Debudaj-Grabysz |
KMC 2: Fast and resource-frugal k-mer counting. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1407.1507, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP BibTeX RDF |
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19 | Kobi Ravid, Ofer Amrani |
MER: Mixed Error Reduction Approach for Soft-Decision Decoding of Product Block Codes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Commun. ![In: IEEE Trans. Commun. 62(9), pp. 3062-3069, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | |
Correction: Enhanced Regulatory Sequence Prediction Using Gapped k-mer Features. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 10(12), 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Mahmoud Ghandi, Dongwon Lee 0005, Morteza Mohammad Noori, Michael A. Beer |
Enhanced Regulatory Sequence Prediction Using Gapped k-mer Features. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 10(7), 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
19 | Laurent Noé, Donald E. K. Martin |
A Coverage Criterion for Spaced Seeds and Its Applications to Support Vector Machine String Kernels and k-Mer Distances. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 21(12), pp. 947-963, 2014. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Yun William Yu, Deniz Yörükoglu, Bonnie Berger |
Traversing the k-mer Landscape of NGS Read Datasets for Quality Score Sparsification. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology - 18th Annual International Conference, RECOMB 2014, Pittsburgh, PA, USA, April 2-5, 2014, Proceedings, pp. 385-399, 2014, Springer, 978-3-319-05268-7. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Chong-Wah Ngo, Yi-Jie Lu, Hao Zhang 0047, Ting Yao, Chun Chet Tan, Lei Pang, Maaike de Boer, John G. M. Schavemaker, Klamer Schutte, Wessel Kraaij |
VIREO-TNO @ TRECVID 2014: Multimedia Event Detection and Recounting (MED and MER). ![Search on Bibsonomy](Pics/bibsonomy.png) |
TRECVID ![In: 2014 TREC Video Retrieval Evaluation, TRECVID 2014, Orlando, FL, USA, November 10-12, 2014, 2014, National Institute of Standards and Technology (NIST). The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP BibTeX RDF |
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19 | Hernán Darío Vargas Cardona, Mauricio A. Álvarez, Álvaro Ángel Orozco |
Sparse representation of MER signals for localizing the Subthalamic Nucleus in Parkinson's disease surgery. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EMBC ![In: 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2014, Chicago, IL, USA, August 26-30, 2014, pp. 950-953, 2014, IEEE. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Emanuel Weitschek, Fabio Cunial, Giovanni Felici |
Classifying Bacterial Genomes with Compact Logic Formulas on k-Mer Frequencies. ![Search on Bibsonomy](Pics/bibsonomy.png) |
DEXA Workshops ![In: 25th International Workshop on Database and Expert Systems Applications, DEXA 2014, Munich, Germany, September 1-5, 2014, pp. 69-73, 2014, IEEE Computer Society, 978-1-4799-5721-7. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
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19 | Chang Sik Kim, Martyn D. Winn, Vipin Sachdeva, Kirk E. Jordan |
K-mer clustering algorithm using a MapReduce approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: 2014 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2014, Belfast, United Kingdom, November 2-5, 2014, pp. 7-9, 2014, IEEE Computer Society, 978-1-4799-5669-2. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
19 | Kevin Tang, Yun Tie, Truman Yang, Ling Guan |
Multimodal emotion recognition (MER) system. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CCECE ![In: IEEE 27th Canadian Conference on Electrical and Computer Engineering, CCECE 2014, Toronto, ON, Canada, May 4-7, 2014, pp. 1-6, 2014, IEEE, 978-1-4799-3099-9. The full citation details ...](Pics/full.jpeg) |
2014 |
DBLP DOI BibTeX RDF |
|
19 | Paul Greenfield, Uwe Röhm |
Answering biological questions by querying k-mer databases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Concurr. Comput. Pract. Exp. ![In: Concurr. Comput. Pract. Exp. 25(4), pp. 497-509, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
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19 | Anthony Fiche, Ali Khenchaf, Jean-Christophe Cexus, Arnaud Martin, Majid Rochdi |
Étude statistique du fouillis de mer à partir de lois alpha-stables. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Traitement du Signal ![In: Traitement du Signal 30(3-5), pp. 243-271, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
|
19 | Juhani Kähärä, Harri Lähdesmäki |
Evaluating a linear k-mer model for protein-DNA interactions using high-throughput SELEX data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 14(S-10), pp. S2, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
|
19 | Sebastian Deorowicz, Agnieszka Debudaj-Grabysz, Szymon Grabowski |
Disk-based k-mer counting on a PC. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 14, pp. 160, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
|
19 | Einar Andreas Rødland |
Compact representation of k-mer de Bruijn graphs for genome read assembly. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 14, pp. 313, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
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19 | Alexander Solovyov, W. Ian Lipkin |
Centroid based clustering of high throughput sequencing reads based on n-mer counts. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 14, pp. 268, 2013. The full citation details ...](Pics/full.jpeg) |
2013 |
DBLP DOI BibTeX RDF |
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