Search results for "genomics"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
26	Feng Gao 0001	Recent developments of software and database in microbial genomics and functional genomics.	Briefings Bioinform.	2019	DBLP DOI BibTeX RDF
26	Yi Zheng, Shan Wu, Yang Bai, Honghe Sun, Chen Jiao, Shaogui Guo, Kun Zhao, Jose M. Blanca, Zhonghua Zhang, Sanwen Huang, Yong Xu, Yiqun Weng, Michael Mazourek, Umesh K. Reddy, Kaori Ando, James D. McCreight, Arthur A. Schaffer, Joseph Burger, Yaakov Tadmor, Nurit Katzir, Xuemei Tang, Yang Liu, James J. Giovannoni, Kai-Shu Ling, W. Patrick Wechter, Amnon Levi, Jordi Garcia-Mas, Rebecca Grumet, Zhangjun Fei	Cucurbit Genomics Database (CuGenDB): a central portal for comparative and functional genomics of cucurbit crops.	Nucleic Acids Res.	2019	DBLP DOI BibTeX RDF
26	Eran Toch, Netta Rager, Tal Florentin, Dan Linenberg, Daya Sellman, Noam Shomron	Augmented-Genomics: Protecting Privacy for Clinical Genomics with Inferential Interfaces.	IUI Companion	2018	DBLP DOI BibTeX RDF
26	Cassio P. de Campos, Paola M. V. Rancoita	Introduction to the special issue on statistical and computational methods for genomics and integrative genomics.	Int. J. Approx. Reason.	2017	DBLP DOI BibTeX RDF
26	Tariq Abdullah, Ahmed Ahmet	Genomics Analyser: A Big Data Framework for Analysing Genomics Data.	BDCAT	2017	DBLP DOI BibTeX RDF
26	Eli Goz, Yael Tsalenchuck, Rony Oren Benaroya, Shimshi Atar, Tahel Altman, Justin Julander, Tamir Tuller	Generation and Comparative Genomics of Synthetic Dengue Viruses.	RECOMB-CG	2017	DBLP DOI BibTeX RDF
26	Helga Thorvaldsdóttir, James T. Robinson, Jill P. Mesirov	Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration.	Briefings Bioinform.	2013	DBLP DOI BibTeX RDF
26	Jie Xiong, Yuming Lu, Jinmei Feng, Dong-Xia Yuan, Miao Tian, Yue Chang, Chengjie Fu, Guangying Wang, Honghui Zeng, Wei Miao	Tetrahymena Functional Genomics Database (TetraFGD): an integrated resource for Tetrahymena functional genomics.	Database J. Biol. Databases Curation	2013	DBLP DOI BibTeX RDF
26	Melanie Swan	Next-Generation Personal Genomic Studies: Extending Social Intelligence Genomics to Cognitive Performance Genomics in Quantified Creativity and Thinking Fast and Slow.	AAAI Spring Symposium: Data Driven Wellness	2013	DBLP BibTeX RDF
26	Kevin L. Childs, Kranti Konganti, C. Robin Buell	The Biofuel Feedstock Genomics Resource: a web-based portal and database to enable functional genomics of plant biofuel feedstock species.	Database J. Biol. Databases Curation	2012	DBLP DOI BibTeX RDF
26	Zhangjun Fei, Je-Gun Joung, Xuemei Tang, Yi Zheng, Mingyun Huang, Je Min Lee, Ryan McQuinn, Denise M. Tieman, Rob Alba, Harry J. Klee, James J. Giovannoni	Tomato Functional Genomics Database: a comprehensive resource and analysis package for tomato functional genomics.	Nucleic Acids Res.	2011	DBLP DOI BibTeX RDF
26	David Stephen Horner, Giulio Pavesi, Tiziana Castrignanò, Paolo D'Onorio De Meo, Sabino Liuni, Michael Sammeth, Ernesto Picardi, Graziano Pesole	Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing.	Briefings Bioinform.	2010	DBLP DOI BibTeX RDF
26	Emmanuel Mongin, Ken Dewar, Mathieu Blanchette	Mapping Association between Long-Range Cis-Regulatory Regions and Their Target Genes Using Comparative Genomics.	RECOMB-CG	2010	DBLP DOI BibTeX RDF
26	Guylaine Poisson, Mahdi Belcaid, Anne Bergeron	Comparative Genomics and Extensive Recombinations in Phage Communities.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
26	Yu Rang Park, Hye Won Lee, Sung-Bum Cho, Ju Han Kim	Cancer Genomics Object Model: An Object Model for Multiple Functional Genomics Data for Cancer Research.	MedInfo	2007	DBLP DOI BibTeX RDF
26	Jay Urbain, Nazli Goharian, Ophir Frieder	IIT TREC 2007 Genomics Track: Using Concept-Based Semantics in Context for Genomics Literature Passage Retrieval.	TREC	2007	DBLP BibTeX RDF
26	Yue Lu 0002, Jing Jiang 0007, Xu Ling, Xin He, ChengXiang Zhai	Language Models for Genomics Information Retrieval: UIUC at TREC 2007 Genomics Track.	TREC	2007	DBLP BibTeX RDF
26	Minoru Kanehisa, Susumu Goto, Masahiro Hattori, Kiyoko F. Aoki-Kinoshita, Masumi Itoh, Shuichi Kawashima, Toshiaki Katayama, Michihiro Araki, Mika Hirakawa	From genomics to chemical genomics: new developments in KEGG.	Nucleic Acids Res.	2006	DBLP DOI BibTeX RDF
26	Kamal Gajendran, Michael D. Gonzales, Andrew D. Farmer, Eric Archuleta, Joe Win, Mark E. Waugh, Sophien Kamoun	Phytophthora functional genomics database (PFGD): functional genomics of phytophthora-plant interactions.	Nucleic Acids Res.	2006	DBLP DOI BibTeX RDF
26	Miguel E. Ruiz	UB at TREC Genomics 2006: Using Passage Retrieval and Pre-Retrieval Query Expansion for Genomics IR.	TREC	2006	DBLP BibTeX RDF
26	Douglas Roy, Peter Ghazal	Genomics and Pathway Biology - a new post-genomics M.Sc. programme from Edinburgh University.	BMC Bioinform.	2005	DBLP BibTeX RDF
23		Clinical Genomics.	Encyclopedia of Database Systems	2009	DBLP DOI BibTeX RDF
23	Phoebe M. Roberts, Aaron M. Cohen, William R. Hersh	Tasks, topics and relevance judging for the TREC Genomics Track: five years of experience evaluating biomedical text information retrieval systems.	Inf. Retr.	2009	DBLP DOI BibTeX RDF	Reference standards, Inter-annotator agreement, Information retrieval, Evaluation, Text mining
23	José Miguel Urquiza Ortiz, Ignacio Rojas Ruiz, Héctor Pomares, Luis Javier Herrera, Ginés Rubio, J. P. Florido	Prediction of protein-protein interactions in yeast using SVMs with genomics/proteomics information and feature selection.	ISCIS	2009	DBLP DOI BibTeX RDF
23	Sébastien Angibaud, Guillaume Fertin, Annelyse Thévenin, Stéphane Vialette	Pseudo Boolean Programming for Partially Ordered Genomes.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
23	Cédric Chauve, Utz-Uwe Haus, Tamon Stephen, Vivija P. You	Minimal Conflicting Sets for the Consecutive Ones Property in Ancestral Genome Reconstruction.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
23	Tomás Vinar, Brona Brejová, Giltae Song, Adam C. Siepel	Reconstructing Histories of Complex Gene Clusters on a Phylogeny.	RECOMB-CG	2009	DBLP DOI BibTeX RDF
23	Alfonso Valencia	Text mining in genomics and systems biology.	DTMBIO	2008	DBLP DOI BibTeX RDF	text mining
23	Xuegong Zhang	Pattern Recognition in Mining High-Throughput Genomics/Proteomics Data: The New Challenges in Old Questions.	ICCTA	2007	DBLP DOI BibTeX RDF
23	Dennis Wegener, Thierry Sengstag, Stelios Sfakianakis, Stefan Rüping 0001, Anthony Assi	GridR: An R-Based Grid-Enabled Tool for Data Analysis in ACGT Clinico-Genomics Trials.	eScience	2007	DBLP DOI BibTeX RDF
23	Ross D. King, Andreas Karwath, Amanda Clare, Luc Dehaspe	Logic and the Automatic Acquisition of Scientific Knowledge: An Application to Functional Genomics.	Computational Discovery of Scientific Knowledge	2007	DBLP DOI BibTeX RDF
23	Srinivas Aluru, David A. Bader, Anantharaman Kalyanaraman	Symposium Evening Tutorial: High-performance Computing Methods for Computational Genomics.	IPDPS	2007	DBLP DOI BibTeX RDF
23	Sébastien Angibaud, Guillaume Fertin, Irena Rusu, Annelyse Thévenin, Stéphane Vialette	A Pseudo-boolean Programming Approach for Computing the Breakpoint Distance Between Two Genomes with Duplicate Genes.	RECOMB-CG	2007	DBLP DOI BibTeX RDF	breakpoint distance, heuristic, genome rearrangement, duplication, pseudo-boolean programming
23	Hendrik Blockeel, Leander Schietgat, Jan Struyf, Saso Dzeroski, Amanda Clare	Decision Trees for Hierarchical Multilabel Classification: A Case Study in Functional Genomics.	PKDD	2006	DBLP DOI BibTeX RDF
23		Estimating neutral divergence amongst Mammals for Comparative Genomics with Mammalian scope.	ICIT	2006	DBLP DOI BibTeX RDF
23	Catherine Putonti, Meizhuo Zhang, S. Lennart Johnsson, Yuriy Fofanov	Two Challenges in Genomics That Can Benefit from Petascale Platforms.	Euro-Par Workshops	2006	DBLP DOI BibTeX RDF
23	Peng Wang, Bo Yan, Jun-tao Guo, Chindo Hicks, Ying Xu 0001	Structural genomics analysis of alternative splicing and its application in modeling structures of alternatively spliced variants.	CSB Workshops	2005	DBLP DOI BibTeX RDF
23	Kwangmin Choi, Jeong-Hyeon Choi, Amit Saple, Zhiping Wang, Jason Lee, Sun Kim	PLATCOM: a Platform for Computational Comparative Genomics on the Web.	CSB Workshops	2005	DBLP DOI BibTeX RDF
23	Francisco Azuaje, Olivier Bodenreider	Incorporating Ontology-Driven Similarity Knowledge into Functional Genomics: An Exploratory Study.	BIBE	2004	DBLP DOI BibTeX RDF
23	Richard O. Sinnott, Micha Bayer, Derek Houghton, David Berry, Magnus Ferrier	Development of a Grid Infrastructure for Functional Genomics.	LSGRID	2004	DBLP DOI BibTeX RDF
23	Ela Hunt, Evangelos Pafilis, Inga Tulloch, John Wilson	Index-Driven XML Data Integration to Support Functional Genomics.	DILS	2004	DBLP DOI BibTeX RDF
23	Sandy Shaw, Paul Shapshak	Fractal Genomics Modeling: A New Approach to Genomic Analysis and Biomarker Discovery.	CSB	2004	DBLP DOI BibTeX RDF	network theory, HIV infection, bioinformatics, fractals, gene expression, brain, scale-free
23	Tom Van Court, Martin C. Herbordt, Richard J. Barton	Case Study of a Functional Genomics Application.	FPL	2003	DBLP DOI BibTeX RDF
23	Magali Roux-Rouquié, Leroy E. Hood, Sandrine Imbeaud, Charles Auffray	Issues in Computational Methods for Functional Genomics and Systems Biology.	CMSB	2003	DBLP DOI BibTeX RDF
23	Mohamed Ibrahim Abouelhoda, Enno Ohlebusch	A Local Chaining Algorithm and Its Applications in Comparative Genomics.	WABI	2003	DBLP DOI BibTeX RDF
23	Claire Nedellec, Mohamed Ould Abdel Vetah, Philippe Bessières	Sentence Filtering for Information Extraction in Genomics, a Classification Problem.	PKDD	2001	DBLP DOI BibTeX RDF
21	Allison Regier, Michael Olson, Scott J. Emrich	Alignment and Analysis of Closely Related Genomes.	BICoB	2009	DBLP DOI BibTeX RDF
21	Tuomas Talvensaari, Ari Pirkola, Kalervo Järvelin, Martti Juhola, Jorma Laurikkala	Focused web crawling in the acquisition of comparable corpora.	Inf. Retr.	2008	DBLP DOI BibTeX RDF	Cross-language information retrieval, Focused crawling, Comparable corpora
21	Temple F. Smith	Computational Biology: Its Challenges Past, Present, and Future.	RECOMB	2008	DBLP DOI BibTeX RDF
21	Anna V. Anagnostopoulos, Judith A. Blake, Carol J. Bult, Martin Ringwald, Joel E. Richardson, James A. Kadin, Janan T. Eppig	Using bio-ontologies as data annotation, integration & analytical tools at the Mouse Genome Informatics resource.	BIBE	2008	DBLP DOI BibTeX RDF
21	Antonio Fabregat, María Arregui, Elisabet Barrera, Olga Portolés, Dolores Corella, Óscar Coltell	NutriGeneOntology: A Biomedical Ontology for Nutrigenomics Research.	BMEI (1)	2008	DBLP DOI BibTeX RDF	NutriGenOntology, genomic and environmental data integration, Gene-diet interaction, Framingham risk equation, Nutritional Epidemiology, Medical, Biomedical Ontology
21	Carl Zimmer	An Outsider's View of the Genome.	RECOMB	2006	DBLP DOI BibTeX RDF
21	Christophe Blanchet, Christophe Combet, Gilbert Deléage	Integrating Bioinformatics Resources on the EGEE Grid Platform.	CCGRID	2006	DBLP DOI BibTeX RDF
21	Xiaohua Zhou, Xiaodan Zhang, Xiaohua Hu 0001	Using Concept-Based Indexing to Improve Language Modeling Approach to Genomic IR.	ECIR	2006	DBLP DOI BibTeX RDF
21	Rudi Cilibrasi, Paul M. B. Vitányi	Clustering by compression.	IEEE Trans. Inf. Theory	2005	DBLP DOI BibTeX RDF
21	Srinivasan Parthasarathy 0001, Wei Wang 0010, Mohammed Javeed Zaki	BIOKDD 2005 workshop report.	SIGKDD Explor.	2005	DBLP DOI BibTeX RDF
21	Shamkant B. Navathe	Bioinformatics databases and applications: a challenging landscape.	ACM Southeast Regional Conference (1)	2005	DBLP DOI BibTeX RDF
21	Christopher Mueller, Mehmet M. Dalkilic, Andrew Lumsdaine	High-Performance Direct Pairwise Comparison of Large Genomic Sequences.	IPDPS	2005	DBLP DOI BibTeX RDF
21	Dinanath Sulakhe, Alex A. Rodriguez, Mark D'Souza, Michael Wilde, Veronika Nefedova, Ian T. Foster, Natalia Maltsev	GNARE: an environment for grid-based high-throughput genome analysis.	CCGRID	2005	DBLP DOI BibTeX RDF
21	Kazuhiro Seki, Javed Mostafa	An application of text categorization methods to gene ontology annotation.	SIGIR	2005	DBLP DOI BibTeX RDF	automatic database curation, genomic IR, text categorization
21	Ambuj K. Singh, B. S. Manjunath, Robert F. Murphy	A Distributed Database for BioMolecular Images.	SIGMOD Rec.	2004	DBLP DOI BibTeX RDF
21	Zhaohui Wu 0001, Xuezhong Zhou, Baoyan Liu, Junli Chen	Text Mining for Finding Functional Community of Related Genes Using TCM Knowledge.	PKDD	2004	DBLP DOI BibTeX RDF	Text Ming, Symptom Complex, Gene Functional Relationships, Traditional Chinese Medicine
21	David A. Lee, Alastair Grant, Ian Sillitoe, Mark Dibley, Juan Garcia Ranea, Christine A. Orengo	A structural perspective on genome evolution.	RECOMB	2004	DBLP DOI BibTeX RDF
21	Hideaki Sugawara	Gene Trek in Procaryote Space Powered by a GRID Environment.	LSGRID	2004	DBLP DOI BibTeX RDF
21	Eugene Lin, Dennis Chen, Yuchi Hwang, Ashely Chang, Z. John Gu	A Prediction Model for the Drug Efficacy of Interferon in CHC Patients Based on SNPs.	CSB	2004	DBLP DOI BibTeX RDF
21	Christopher James Langmead, Bruce Randall Donald	High-Throughput 3D Structural Homology Detection via NMR Resonance Assignment.	CSB	2004	DBLP DOI BibTeX RDF
21	Bertil Schmidt, Lin Feng, Amey V. Laud, Yusdi Santoso	Parallel Detection of Regulatory Elements with gMP.	IPDPS	2003	DBLP DOI BibTeX RDF
21	Klaus Lindpaintner	Genetics and genemoics: impact on drug discovery and development.	RECOMB	2001	DBLP DOI BibTeX RDF
21	Stefan Unger, Andrew Komornicki	Computational Biology: IT Challenges and Opportunities.	International Conference on Computational Science (1)	2001	DBLP DOI BibTeX RDF
17	Shyam Kumar Doddavula, Madhavi Rani, Santonu Sarkar, Harsh Rajesh Vachhani, Akansha Jain, Mudit Kaushik, Anirban Ghosh	Implementation of a Scalable Next Generation Sequencing Business Cloud Platform-An Experience Report.	IEEE CLOUD	2011	DBLP DOI BibTeX RDF	Next Generation Sequencing, Amazon Cloud, Application Porting, Scalability, Hadoop, Genomics, BLAST
17	Qian Zhu 0002, Zaky Adam, Vicky Choi, David Sankoff	Generalized Gene Adjacencies, Graph Bandwidth, and Clusters in Yeast Evolution.	IEEE ACM Trans. Comput. Biol. Bioinform.	2009	DBLP DOI BibTeX RDF	graph bandwidth, Saccharomyces cerevisiae, Candida glabrata, Ashbya gossypii, Kluyveromyces waltii, Kluyveromyces lactis, dynamic programming, evolution, phylogeny, Comparative genomics, genome rearrangements, gene clusters, yeast
17	Xin Chen, Yun Cui	An Approximation Algorithm for the Minimum Breakpoint Linearization Problem.	IEEE ACM Trans. Comput. Biol. Bioinform.	2009	DBLP DOI BibTeX RDF	partially ordered genomes, breakpoint distance, approximation algorithms, Comparative genomics
17	Ross D. King, Jem J. Rowland, Wayne Aubrey, Maria Liakata, Magdalena Markham, Larisa N. Soldatova, Ken E. Whelan, Amanda Clare, Mike Young, Andrew Sparkes, Stephen G. Oliver, Pinar Pir	The Robot Scientist Adam.	Computer	2009	DBLP DOI BibTeX RDF	Robot scientists, Yeast functional genomics, Laboratory automation software, Artificial intelligence, Computer science, Adam
17	Veli Mäkinen, Gonzalo Navarro 0001, Jouni Sirén, Niko Välimäki	Storage and Retrieval of Individual Genomes.	RECOMB	2009	DBLP DOI BibTeX RDF	full-text indexing, compressed data structures, suffix tree, Comparative genomics
17	Mikhail S. Gelfand, Alexei E. Kazakov, Yuri D. Korostelev, Olga N. Laikova, Andrey A. Mironov, Aleksandra B. Rakhmaninova, Dmitry A. Ravcheev, Dmitry A. Rodionov, Alexei G. Vitreschak	Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk).	ISBRA	2009	DBLP DOI BibTeX RDF	regulation of transcription, regulation of translation, T-box, Comparative genomics, transcription factor, binding site, bacteria
17	Biing-Feng Wang, Shang-Ju Liu, Chien-Hsin Lin	Improved Algorithms for the Gene Team Problem.	COCOA	2009	DBLP DOI BibTeX RDF	conserved gene clusters, gene teams, algorithms, bioinformatics, comparative genomics
17	Joanna Jakubowska, Ela Hunt, John McClure, Matthew Chalmers, Martin W. McBride, Anna F. Dominiczak	VisGenome and Ensembl: Usability of Integrated Genome Maps.	DILS	2008	DBLP DOI BibTeX RDF	visualisation of large data sets, genome maps, genome visualisation, QTL, comparative and functional genomics, user study
17	Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Guillaume Fertin, Raffaella Rizzi, Stéphane Vialette	Exemplar Longest Common Subsequence.	IEEE ACM Trans. Comput. Biol. Bioinform.	2007	DBLP DOI BibTeX RDF	combinatorial algorithms, comparative genomics, Longest common subsequence, algorithm design and analysis, analysis of algorithms and problem complexity
17	Guillaume Blin, Cédric Chauve, Guillaume Fertin, Romeo Rizzi, Stéphane Vialette	Comparing Genomes with Duplications: A Computational Complexity Point of View.	IEEE ACM Trans. Comput. Biol. Bioinform.	2007	DBLP DOI BibTeX RDF	maximum adjacency disruption number, summed adjacency disruption number, computational complexity, Comparative genomics, common intervals
17	Jimmy Lin, W. John Wilbur	Syntactic sentence compression in the biomedical domain: facilitating access to related articles.	Inf. Retr.	2007	DBLP DOI BibTeX RDF	Sentence compression, Extrinsic evaluation, Genomics IR, MEDLINE, PubMed
17	Dominique Lavenier, Gilles Georges, Xinchun Liu	A Reconfigurable Index FLASH Memory tailored to Seed-Based Genomic Sequence Comparison Algorithms.	J. VLSI Signal Process.	2007	DBLP DOI BibTeX RDF	seed-based algorithm, indexing, bioinformatics, reconfigurable architecture, FLASH memory, index, genomics, sequence comparison
17	D. Dutta Majumder, Christian Ulrichs, Debosmita Majumder, Inga Mewis, Ashoke Ranjan Thakur, R. L. Brahmachary, Rajat Banerjee, Ayesha Rahman, Nitai Debnath, Dipankar Seth, Sumistha Das, Indrani Roy, Amrita Ghosh, Prity Sagar, Carsten Schulz, Nguyen Quang Linh, Arunava Goswami	Current Status and Future Trends of Nanoscale Technology and Its Impact on Modern Computing, Biology, Medicine and Agricultural Biotechnology.	ICCTA	2007	DBLP DOI BibTeX RDF	hydrophobic nanosilica, lipophilic nanosilica, Nanoscience, nanosilica, machine learning, pervasive computing, computational biology, genomics, reversible computing, Agriculture, cancer, HIV, cybernetics, quantum mechanics, consciousness, Alzheimer's disease, neuronal network, biotechnology, metabolomics, malaria
17	Deepak Perumal, Chu Sing Lim, Meena K. Sakharkar	In silico Identification of Putative Drug Targets in Pseudomonas aeruginosa Through Metabolic Pathway Analysis.	PRIB	2007	DBLP DOI BibTeX RDF	Pseudomonas aeruginosa, Homo sapiens, Comparative microbial genomics, KEGG, kdsA, kdsB, waaG, lpxC, Potential drug targets, MODELLER, Homology
17	Arash Shaban-Nejad, Volker Haarslev	Categorical Representation of Evolving Structure of an Ontology for Clinical Fungus.	AIME	2007	DBLP DOI BibTeX RDF	Bio-Ontologies, Fungal Genomics, Change Management, Category Theory
17	Mattia Zampieri, Ingrid Cifola, Dario Basso, Roberta Spinelli, Luca Beltrame, Clelia Peano, Cristina Battaglia, Silvio Bicciato	Locally Adaptive Statistical Procedures for the Integrative Analysis on Genomic and Transcriptional Data.	WILF	2007	DBLP DOI BibTeX RDF	integrative, microarray, gene expression, genomics, genotyping
17	Emma Byrne	Optimising the flow of experiments to a robot scientist with multi-objective evolutionary algorithms.	GECCO (Companion)	2007	DBLP DOI BibTeX RDF	evolutionary multi-objective optimisation, robot scientists, sxperiment flow optimisation, yeast genomics, performance, evaluation
17	Julio J. Valdés, Alan J. Barton	Computational intelligence techniques: a study of scleroderma skin disease.	GECCO (Companion)	2007	DBLP DOI BibTeX RDF	Scleroderma disease, hybrid evolutionary-classical optimization, similarity structure preservation, virtual reality spaces, clustering, grid computing, genetic programming, rough sets, particle swarm optimization, differential evolution, visual data mining, genomics
17	Praveen Koduru, Stephen M. Welch, Sanjoy Das	A particle swarm optimization approach for estimating parameter confidence regions.	GECCO	2007	DBLP DOI BibTeX RDF	evolutionary algorithms, particle swarm optimization, Genomics, confidence regions
17	Nalvo F. Almeida, André C. Lima, Said Sadique Adi, Carlos Juliano M. Viana, Marcel Y. Nakazaki, Andrey A. Tamura, Luciana Y. Hiratsuka, Leandro P. Brazil	Mapping Contigs onto Reference Genomes.	BSB	2007	DBLP DOI BibTeX RDF	mapping contigs, comparative genomics
17	Allam Appa Rao, Bhremeramba, G. R. Sridhar	Mathematical Analysis of Diabetes Related Proteins Having High Sequence Complexity.	ICTAI	2006	DBLP DOI BibTeX RDF	sequence complexity, Comparative genomics, compositional analysis
17	Rong Chen, Hesham H. Ali	A new approach for gene prediction using comparative sequence analysis.	SAC	2005	DBLP DOI BibTeX RDF	coding and non-coding regions, multiple species, comparative genomics, gene prediction
17	Mehmet M. Dalkilic, Arijit Sengupta	Design and evaluation of CATPA: curation and alignment tool for protein analysis.	SAC	2005	DBLP DOI BibTeX RDF	genomic information retrieval, bioinformatics, alignment, genomics, database modeling
17	Shu Ju Hsieh, Yun Sheng Chung, Chun-Yuan Lin, Chuan Yi Tang	EXONSCAN: EXON prediction with Signal detection and Coding region AligNment in homologous sequences.	SAC	2005	DBLP DOI BibTeX RDF	sequence alignment, comparative genomics, gene prediction
17	Praveen Koduru, Sanjoy Das, Stephen M. Welch, Judith L. Roe, Zenaida P. Lopez-Dee	A co-evolutionary hybrid algorithm for multi-objective optimization of gene regulatory network models.	GECCO	2005	DBLP DOI BibTeX RDF	hybrid, genomics, multi-objective, simplex
17	Xin He, Michael H. Goldwasser	Identifying conserved gene clusters in the presence of orthologous groups.	RECOMB	2004	DBLP DOI BibTeX RDF	clusters of orthologous genes, conserved gene clusters, gene teams, bioinformatics, comparative genomics
17	David Sankoff, Phil Trinh	Chromosomal breakpoint re-use in the inference of genome sequence rearrangement.	RECOMB	2004	DBLP DOI BibTeX RDF	Hannenhalli-Pevzner algorithm, synteny blocks, evolution, inversion, comparative genomics, breakpoints, rearrangements
17	Jiawu Feng, Paolo Emilio Barbano, Bud Mishra	Time-frequency feature detection for time-course microarray data.	SAC	2004	DBLP DOI BibTeX RDF	local distance, time frequency analysis, gene networks, functional genomics
17	S. Alireza Aghili, Ozgur D. Sahin, Divyakant Agrawal, Amr El Abbadi	Efficient Filtration of Sequence Similarity Search Through Singular Value Decomposition.	BIBE	2004	DBLP DOI BibTeX RDF	Approximate String Search, Sequence Homology, Bioinformatics, Singular Value Decomposition, Comparative genomics
17	Debra T. Burhans, Matt DeJongh, Travis E. Doom, Mark LeBlanc	Bioinformatics in the undergraduate curriculum: opportunities for computer science educators.	SIGCSE	2004	DBLP DOI BibTeX RDF	interdisciplinary education, bioinformatics, computational biology, genomics
17	Ela Hunt, Neil Hanlon	SyntenyVista.	NordiCHI	2004	DBLP DOI BibTeX RDF	cartoon scaling, synteny, visualization, genomics