Search results for "genotyping"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
20	Yuanyuan Xiao, Mark R. Segal, Yee Hwa Yang, Ru-Fang Yeh	A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays.	Bioinform.	2007	DBLP DOI BibTeX RDF
20	Shuichi Takitoh, Shogo Fujii, Yoichi Mase, Junichi Takasaki, Toshimasa Yamazaki, Yozo Ohnishi, Masao Yanagisawa, Yusuke Nakamura, Naoyuki Kamatani	Accurate automated clustering of two-dimensional data for single-nucleotide polymorphism genotyping by a combination of clustering methods: evaluation by large-scale real data.	Bioinform.	2007	DBLP DOI BibTeX RDF
20	Waibhav Tembe, Nils Homer, Sotiris Mitropanopoulos, Mitchell Storey, Szabolcs Szelinger, Marcel Brun, Matthew J. Huentelman, Edward Suh, Dietrich A. Stephan, James Lowey, John V. Pearson, David W. Craig	Analysis Software for High-density Pooled Genotyping Data.	BIOCOMP	2007	DBLP BibTeX RDF
20	George W. Jackson, Roger J. McNichols, George E. Fox, Richard C. Willson	Bacterial genotyping by 16S rRNA mass cataloging.	BMC Bioinform.	2006	DBLP DOI BibTeX RDF
20	Lucía Conde, Juan M. Vaquerizas, Hernán Dopazo, Leonardo Arbiza, Joke Reumers, Frederic Rousseau 0001, Joost Schymkowitz, Joaquín Dopazo	PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes.	Nucleic Acids Res.	2006	DBLP DOI BibTeX RDF
20	David C. Walley, Ben W. Tripp, Young C. Song, Keith R. Walley, Scott J. Tebbutt	MACGT: multi-dimensional automated clustering genotyping tool for analysis of microarray-based mini-sequencing data.	Bioinform.	2006	DBLP DOI BibTeX RDF
20	Daisuke Komura, Kunihiro Nishimura, Shumpei Ishikawa, Binaya Panda, Jing Huang 0024, Hiroshi Nakamura, Sigeo Ihara, Michitaka Hirose, Keith W. Jones, Hiroyuki Aburatani	Noise Reduction from Genotyping Microarrays Using Probe Level Information.	Silico Biol.	2006	DBLP BibTeX RDF
20	Mohsen Abbaspour, Rafeef Abugharbieh, Mohua Podder, Scott J. Tebbutt	Fully automated analysis of multi-resolution four-channel micro-array genotyping data.	Medical Imaging: Image Processing	2006	DBLP DOI BibTeX RDF
20	Yuhang Wang	Cancer Classification Using Loss of Heterozygosity Data Derived from Single-Nucleotide Polymorphism Genotyping Arrays.	EMBC	2006	DBLP DOI BibTeX RDF
20	Stéphanie Monnier, David G. Cox, Tim Albion, Federico Canzian	T.I.M.S: TaqMan Information Management System, tools to organize data flow in a genotyping laboratory.	BMC Bioinform.	2005	DBLP DOI BibTeX RDF
20	Yao-Ting Huang, Kui Zhang, Ting Chen 0006, Kun-Mao Chao	Selecting additional tag SNPs for tolerating missing data in genotyping.	BMC Bioinform.	2005	DBLP DOI BibTeX RDF
20	Colin Clarke, Michael Malecha, Selly Saini	NanoSNP: A computational platform for high throughput Quantum Dot encoded microsphere SNP genotyping.	BMC Bioinform.	2005	DBLP BibTeX RDF
20	Yonatan Aumann, Efrat Manisterski, Zohar Yakhini	Designing optimally multiplexed SNP genotyping assays.	J. Comput. Syst. Sci.	2005	DBLP DOI BibTeX RDF
20	Steven Ringquist, Christopher Pecoraro, Crystal M. S. Gilchrist, Alexis Styche, William A. Rudert, Panayiotis V. Benos, Massimo Trucco	SOP3v2: web-based selection of oligonucleotide primer trios for genotyping of human and mouse polymorphisms.	Nucleic Acids Res.	2005	DBLP DOI BibTeX RDF
20	Matthias Klaften, Martin Hrabé de Angelis	ARTS: a web-based tool for the set-up of high-throughput genome-wide mapping panels for the SNP genotyping of mouse mutants.	Nucleic Acids Res.	2005	DBLP DOI BibTeX RDF
20	Lucía Conde, Juan M. Vaquerizas, Carles Ferrer-Costa, Xavier de la Cruz, Modesto Orozco, Joaquín Dopazo	PupasView: a visual tool for selecting suitable SNPs, with putative pathological effect in genes, for genotyping purposes.	Nucleic Acids Res.	2005	DBLP DOI BibTeX RDF
20	Xiaojun Di, Hajime Matsuzaki, Teresa A. Webster, Earl Hubbell, Guoying Liu, Shoulian Dong, Dan Bartell, Jing Huang 0024, Richard Chiles, Geoffrey Yang, Mei-mei Shen, David Kulp, Giulia C. Kennedy, Rui Mei, Keith W. Jones, Simon Cawley	Dynamic model based algorithms for screening and genotyping over 100K SNPs on oligonucleotide microarrays.	Bioinform.	2005	DBLP DOI BibTeX RDF
20	Tulio de Oliveira, Koen Deforche, Sharon Cassol, Mika Salminen, Dimitris Paraskevis, Chris Seebregts, Joke Snoeck, Estrelita J. Janse van Rensburg, Annemarie M. J. Wensing, David A. van de Vijver, Charles A. Boucher, Ricardo Camacho, Anne-Mieke Vandamme	An automated genotyping system for analysis of HIV-1 and other microbial sequences.	Bioinform.	2005	DBLP DOI BibTeX RDF
20	Scott J. Tebbutt, Igor V. Opushnyev, Ben W. Tripp, Ayaz M. Kassamali, Wendy L. Alexander, Marilyn I. Andersen	SNP Chart: an integrated platform for visualization and interpretation of microarray genotyping data.	Bioinform.	2005	DBLP DOI BibTeX RDF
20	Ion I. Mandoiu, Claudia Prajescu	High-Throughput SNP Genotyping by SBE/SBH	CoRR	2005	DBLP BibTeX RDF
20	Roded Sharan, Jens Gramm, Zohar Yakhini, Amir Ben-Dor	Multiplexing Schemes for Generic SNP Genotyping Assays.	J. Comput. Biol.	2005	DBLP DOI BibTeX RDF
20	Toshiko Matsumoto, Ryo Nakashige	Evaluating Robustness of Algorithm for Microsatellite Marker Genotyping.	CIBCB	2005	DBLP BibTeX RDF
20	Ching Yu Austin Huang, Joel F. Studebaker, Anton Yuryev, Jianping Huang, Kathryn E. Scott, Jennifer Kuebler, Shobha Varde, Steven Alfisi, Craig A. Gelfand, Mark Pohl, Michael T. Boyce-Jacino	Auto-validation of fluorescent primer extension genotyping assay using signal clustering and neural networks.	BMC Bioinform.	2004	DBLP DOI BibTeX RDF
20	Mikhail Rozanov, Uwe Plikat, Colombe Chappey, Andrey Kochergin, Tatiana A. Tatusova	A web-based genotyping resource for viral sequences.	Nucleic Acids Res.	2004	DBLP DOI BibTeX RDF
20	Hironori Fujisawa, Shinto Eguchi, Masaru Ushijima, Satoshi Miyata, Yoshio Miki, T. Muto, Masaaki Matsuura	Genotyping of single nucleotide polymorphism using model-based clustering.	Bioinform.	2004	DBLP DOI BibTeX RDF
20	Anton Yuryev, Jianping Huang, Kathryn E. Scott, Jennifer Kuebler, Miriam Donaldson, Michael S. Phillips 0002, Mark Pohl, Michael T. Boyce-Jacino	Primer Design and Marker Clustering for Multiplex SNP-IT Primer Extension Genotyping Assay using Statistical Modeling.	Bioinform.	2004	DBLP DOI BibTeX RDF
20	Adele A. Mitchell, Michael E. Zwick, Aravinda Chakravarti, David J. Cutler	Discrepancies in dbSNP confirmation rates and allele frequency distributions from varying genotyping error rates and patterns.	Bioinform.	2004	DBLP DOI BibTeX RDF
20	Roded Sharan, Amir Ben-Dor, Zohar Yakhini	Multiplexing Schemes for Generic SNP Genotyping Assays.	Pacific Symposium on Biocomputing	2004	DBLP BibTeX RDF
20	Sun Jun Kang, Derek Gordon, A. M. Brown, Jürg Ott, Stephen J. Finch	Tradeoff Between No-Call Reduction in Genotyping Error Rate and Loss of Sample Size for Genetic Case/Control Association Studies.	Pacific Symposium on Biocomputing	2004	DBLP BibTeX RDF
20	Richard Myers, Catherine V. Gale, Caroline Clark, Julie Bennett, Richard S. Tedder, Ian G. Williams, Paul Kellam	The Novel Virus Genotyping Tool (STAR) and its Use in Subtyping Human Immunodeficiency Virus Type-1 and Hepatitis B Viruses.	Spanish Bioinformatics Conference	2004	DBLP BibTeX RDF
20	Peisen Zhang, Huitao Sheng, Alfredo Morabia, T. Conrad Gilliam	Optimal Step Length EM Algorithm (OSLEM) for the estimation of haplotype frequency and its application in lipoprotein lipase genotyping.	BMC Bioinform.	2003	DBLP DOI BibTeX RDF
20	Wei-Min Liu, Xiaojun Di, Geoffrey Yang, Hajime Matsuzaki, Jing Huang 0024, Rui Mei, Thomas B. Ryder, Teresa A. Webster, Shoulian Dong, Guoying Liu, Keith W. Jones, Giulia C. Kennedy, David Kulp	Algorithms for large-scale genotyping microarrays.	Bioinform.	2003	DBLP DOI BibTeX RDF
20	Chen-Khong Tham, Chew-Kiat Heng, W. C. Chin	Predicting Risk of Coronary Artery Disease from Dna Microarray-based Genotyping Using Neural Networks and Other Statistical Analysis Tool.	J. Bioinform. Comput. Biol.	2003	DBLP DOI BibTeX RDF
20	Jeremy Heil, Stephen Glanowski, J. Scott, Emily S. Winn-Deen, Ivy McMullen, L. Wu, C. Gire, A. Sprague	An Automated Computer System to Support Ultra High Throughput SNP Genotyping.	Pacific Symposium on Biocomputing	2002	DBLP BibTeX RDF
20	Fadi Abdi, E. Morton Bradbury, Norman Doggett, Xian Chen	Rapid characterization of DNA oligomers and genotyping of single nucleotide polymorphism using nucleotide-specific mass tags.	Nucleic Acids Res.	2001	DBLP DOI BibTeX RDF
20	Jochen Hampe, Andreas Wollstein, Timothy Lu, Hans-Jürgen Frevel, Marcus Will, Carl Manaster, Stefan Schreiber	An integrated system for high throughput TaqManTM based SNP genotyping.	Bioinform.	2001	DBLP DOI BibTeX RDF
20	Joachim Burger	Sequenzierung, RFLP-Analyse und STR-Genotypisierung alter DNA aus archäologischen Funden und historischen Werkstoffen (DNA-sequencing, RFLP-analysis, and STR-genotyping of ancient DNA from archaeological finds and historic artefacts)		2001	RDF
20	B. Richards, J. Cadman, M. France	A Decision Support System for Cholinesterase Genotyping.	MIE	1999	DBLP DOI BibTeX RDF
20	Todd E. Scheetz, Terry A. Braun, Kyle J. Munn, Edwin M. Stone, Val C. Sheffield, Thomas L. Casavant	GenoMap: A Distributed System for Unifying Genotyping and Genetic Linkage Analysis.	Parallel Comput.	1998	DBLP DOI BibTeX RDF
20	Giuseppe Lancia, Mark Perlin	Genotyping of Pooled Microsatellite Markers by Combinatorial Optimization Techniques.	Discret. Appl. Math.	1998	DBLP DOI BibTeX RDF
20	Rainer Fuchs	Grouper - creation of marker sets for multiplexed genotyping.	Comput. Appl. Biosci.	1997	DBLP DOI BibTeX RDF
20	I. N. Day, S. D. O'Dell, I. D. Cash, S. E. Humphries, G. P. Weavind	Electrophoresis for genotyping: temporal thermal gradient gel electrophoresis for profiling of oligonucleotide dissociation.	Nucleic Acids Res.	1995	DBLP DOI BibTeX RDF
16	Emily Rose Holzinger, Carrie C. Buchanan, Scott M. Dudek, Eric Torstenson, Stephen D. Turner, Marylyn D. Ritchie	Initialization parameter sweep in ATHENA: optimizing neural networks for detecting gene-gene interactions in the presence of small main effects.	GECCO	2010	DBLP DOI BibTeX RDF	human genetics, neural networks, machine learning, grammatical evolution, epistasis
16	Maozu Guo 0001, Jun Wang 0035, Chun-yu Wang, Yang Liu 0006	A hybrid clustering and graph based algorithm for tagSNP selection.	Soft Comput.	2009	DBLP DOI BibTeX RDF	TagSNP selection, Maximum density subgraph (MDS), Linkage disequilibrium (LD), Haplotypes diversity, Clustering algorithm
16	Hyun Min Kang, Noah Zaitlen, Buhm Han, Eleazar Eskin	An Adaptive and Memory Efficient Algorithm for Genotype Imputation.	RECOMB	2009	DBLP DOI BibTeX RDF
16	Wei-Bung Wang, Tao Jiang 0001	Efficient Inference of Haplotypes from Genotypes on a Pedigree with Mutations and Missing Alleles (Extented Abstract).	CPM	2009	DBLP DOI BibTeX RDF
16	Shamil R. Sunyaev	Interpreting Population Sequencing Data.	ISBRA	2009	DBLP DOI BibTeX RDF
16	Irina Astrovskaya, Alexander Zelikovsky	Genotype Tagging with Limited Overfitting.	BSB	2009	DBLP DOI BibTeX RDF	genotype tagging, linear programming, hypergraph, minimum dominating set
16	Jorge Amigo, Christopher Phillips, Antonio Salas	Viability of in-house datamarting approaches for population genetics analysis of snp genotypes.	DTMBIO	2008	DBLP DOI BibTeX RDF	ceph, hapmap, perlegen, snps, genotypes, population genetics, data mart
16	Pritam Chanda, Aidong Zhang, M. Ramanthan	A novel information theoretic method for detecting gene-gene and gene-environment interactions in complex diseases.	BIBE	2008	DBLP DOI BibTeX RDF
16	Athos Antoniades, L. Loizou, Aristos Aristodimou, Constantinos S. Pattichis	A binary format for genetic data designed for large whole genome studies that enable both marker and strand based analyses.	BIBE	2008	DBLP DOI BibTeX RDF
16	Dan L. Nicolae, Omar De la Cruz, William Wen, Baoguan Ke, Minsun Song	Invited Keynote Talk: Set-Level Analyses for Genome-Wide Association Data.	ISBRA	2008	DBLP DOI BibTeX RDF
16	Lin Wan, Wenjiang J. Fu, Minghua Deng, Minping Qian	A Method to Correct Systematic Bias in Affymetrix SNP Arrays.	BMEI (1)	2008	DBLP DOI BibTeX RDF	Affymetrix SNP arrays, copy number estimation, systematic bias
16	Hyun Seok Park	Mining a logical set of microarray data from heterogeneous multi-platform microarrays.	ICUIMC	2008	DBLP DOI BibTeX RDF	microarrays, biomedical informatics
16	Qi Zhang 0025, Wei Wang 0010, Leonard McMillan, Jan F. Prins, Fernando Pardo-Manuel de Villena, David Threadgill	Genotype Sequence Segmentation: Handling Constraints and Noise.	WABI	2008	DBLP DOI BibTeX RDF
16	Srinath Sridhar 0001, Satish Rao, Eran Halperin	An Efficient and Accurate Graph-Based Approach to Detect Population Substructure.	RECOMB	2007	DBLP DOI BibTeX RDF
16	William S. Bush, Tricia A. Thornton-Wells, Marylyn D. Ritchie	Association Rule Discovery Has the Ability to Model Complex Genetic Effects.	CIDM	2007	DBLP DOI BibTeX RDF
16	Dumitru Brinza, Alexander Zelikovsky	Discrete Methods for Association Search and Status Prediction in Genotype Case-Control Studies.	BIBE	2007	DBLP DOI BibTeX RDF
16	Andreas D. Baxevanis	Transforming Medicine: Genomics, Bioinformatics, and Human Health.	BIBE	2007	DBLP DOI BibTeX RDF
16	So Young Yoo, Tae-im Kim, Sang Yup Lee, Eng Kweon Kim, Ki Chang Keum, Nae Choon Yoo, Won Min Yoo	A Simple DNA Chip for Diagnosis of Most Common Corneal Dystrophies Caused by βigh3 Gene Mutations.	FBIT	2007	DBLP DOI BibTeX RDF
16	Jing Hua Zhao, Jian'an Luan, Qihua Tan, Ruth Loos, Nick Wareham	Analysis of Large Genomic Data in Silico: The EPIC-Norfolk Study of Obesity.	ICIC (3)	2007	DBLP DOI BibTeX RDF	genomewide association, statistical analysis system, Data mining, obesity
16	In-Hee Lee, Soo-Yong Shin, Byoung-Tak Zhang	Multiplex PCR Assay Design by Hybrid Multiobjective Evolutionary Algorithm.	EMO	2007	DBLP DOI BibTeX RDF
16	Guoqing Lu, Kashi Buyyani, Naresh Goty, Ruben O. Donis, Zhengxin Chen	Influenza A Virus Informatics: Genotype-Centered Database and Genotype Annotation.	IMSCCS	2007	DBLP DOI BibTeX RDF
16	Justin Kennedy, Ion I. Mandoiu, Bogdan Pasaniuc	Genotype Error Detection Using Hidden Markov Models of Haplotype Diversity.	WABI	2007	DBLP DOI BibTeX RDF
16	Weidong Mao, Shannon Kelly	An Optimum Random Forest Model for Prediction of Genetic Susceptibility to Complex Diseases.	PAKDD	2007	DBLP DOI BibTeX RDF	association study, complex diseases, prediction, random forest, risk factor, susceptibility
16	Eran Halperin	SNP and Haplotype Analysis - Algorithms and Applications.	CPM	2006	DBLP DOI BibTeX RDF
16	Yang Jiang, Qingpu Zhang, Xia Li 0004, Lei Du, Wei Jiang 0023, Ruijie Zhang, Jing Li, Shaoqi Rao	Analysis of Sib-Pair IBD Profiles Using Ensemble Decision Tree Approach: Application to Alcoholism.	ICIC (3)	2006	DBLP DOI BibTeX RDF
16	Dumitru Brinza, Alexander Zelikovsky	Phasing of 2-SNP Genotypes Based on Non-random Mating Model.	International Conference on Computational Science (2)	2006	DBLP DOI BibTeX RDF
16	Jingwu He, Alexander Zelikovsky	Tag SNP Selection Based on Multivariate Linear Regression.	International Conference on Computational Science (2)	2006	DBLP DOI BibTeX RDF
16	Jae-Yoon Jung, Phil Hyoun Lee	A Neural Network Model for Maximizing Prediction Accuracy in Haplotype Tagging SNP Selection.	IJCNN	2006	DBLP DOI BibTeX RDF
16	Dumitru Brinza, Alexander Zelikovsky	Combinatorial Methods for Disease Association Search and Susceptibility Prediction.	WABI	2006	DBLP DOI BibTeX RDF
16	Eric S. Lander	Biology as Information.	RECOMB	2005	DBLP DOI BibTeX RDF
16	Susmita Sur-Kolay, Satyajit Banerjee, Srabani Mukhopadhyaya, C. A. Murthy	Genetic Algorithm for Double Digest Problem.	PReMI	2005	DBLP DOI BibTeX RDF
16	Tu Minh Phuong, Zhen Lin, Russ B. Altman	Choosing SNPs Using Feature Selection.	CSB	2005	DBLP DOI BibTeX RDF
16	Anya Tsalenko, Roded Sharan, Hege Edvardsen, Vessela N. Kristensen, Anne-Lise Børresen-Dale, Amir Ben-Dor, Zohar Yakhini	Analysis of SNP-Expression Association Matrices.	CSB	2005	DBLP DOI BibTeX RDF
16	Camille Bodley Troup, Bill Martin, Carl E. McMillin, Robert M. Horton	Simulated Pharmacogenomics Exercises for the Cybertory Virtual Molecular Biology Laboratory.	CSB Workshops	2005	DBLP DOI BibTeX RDF
16	Eugene Lin, Dennis Chen, Yuchi Hwang, Ashely Chang, Z. John Gu	A Prediction Model for the Drug Efficacy of Interferon in CHC Patients Based on SNPs.	CSB	2004	DBLP DOI BibTeX RDF
16	Yizhou Xie, Xujing Wang	Analysis of Population Dynamics in Beta-Cell Destruction Lead to Identification of Novel Candidate Genes for Type 1 Diabetes.	CSB	2004	DBLP DOI BibTeX RDF
16	Vineet Bafna, Bjarni V. Halldórsson, Russell Schwartz, Andrew G. Clark, Sorin Istrail	Haplotypes and informative SNP selection algorithms: don't block out information.	RECOMB	2003	DBLP DOI BibTeX RDF	haplotype tagging, SNPs, haplotype blocks
16	Kui Zhang, Ting Chen 0006, Michael S. Waterman, Zhaohui S. Qin, Jun S. Liu, Fengzhu Sun	Dynamic Programming Algorithms for Haplotype Block Partitioning and Tag SNP Selection Using Haplotype Data or Genotype Data.	Computational Methods for SNPs and Haplotype Inference	2002	DBLP DOI BibTeX RDF
16	Tianhua Niu, Xin Lu, Hosung Kang, Zhaohui S. Qin, Jun S. Liu	Haplotype Inference and Its Application in Linkage Disequilibrium Mapping.	Computational Methods for SNPs and Haplotype Inference	2002	DBLP DOI BibTeX RDF
16	Dan Bartell, Xiaojun Di, Wei-Min Liu	Processing GeneChip© array images.	ISBI	2002	DBLP DOI BibTeX RDF
16	Amir Ben-Dor, Richard M. Karp, Benno Schwikowski, Zohar Yakhini	Universal DNA tag systems: a combinatorial design scheme.	RECOMB	2000	DBLP DOI BibTeX RDF