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Venues (Conferences, Journals, ...)
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GrowBag graphs for keyword ? (Num. hits/coverage)
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The graphs summarize 238 occurrences of 131 keywords
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Results
Found 763 publication records. Showing 763 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
16 | Chao Zhou, Hongyu Zhao 0003, Tao Wang 0067 |
Transformation and differential abundance analysis of microbiome data incorporating phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(24), pp. 4652-4660, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Maya Gupta, Paul Zaharias, Tandy J. Warnow |
Accurate large-scale phylogeny-aware alignment using BAli-Phy. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(24), pp. 4677-4683, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Benjamin D. Redelings |
Erratum to: BAli-Phy version 3: model-based co-estimation of alignment and phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(24), pp. 4904, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Benjamin D. Redelings |
Bali-Phy version 3: model-based co-estimation of alignment and phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 37(18), pp. 3032-3034, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Miklós Csürös |
Gain-loss-duplication models on a phylogeny: exact algorithms for computing the likelihood and its gradient. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2107.11440, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP BibTeX RDF |
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16 | Muhammad Anaz K, Sasidharan N., Remakanthan A., Dilsha M. V. |
ITS 2 and RNA secondary structure-based analysis reveals a clear picture on phylogeny of South Indian Salacia spp. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 91, pp. 107438, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Qiaoji Xu, Xiaomeng Zhang, Yue Zhang, Chunfang Zheng, James H. Leebens-Mack, Lingling Jin, David Sankoff |
The monoploid chromosome complement of reconstructed ancestral genomes in a phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Bioinform. Comput. Biol. ![In: J. Bioinform. Comput. Biol. 19(6), pp. 2140008:1-2140008:17, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Soogang Eoh, Suh-Ryung Kim |
On chordal phylogeny graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Discret. Appl. Math. ![In: Discret. Appl. Math. 302, pp. 80-91, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Thomas K. F. Wong, Teng Li, Louis Ranjard, Steven H. Wu, Jeet Sukumaran, Allen G. Rodrigo |
An assembly-free method of phylogeny reconstruction using short-read sequences from pooled samples without barcodes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 17(9), 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Daniel Novikov, Sergey Knyazev, Mark Grinshpon, Pelin B. Icer, Pavel Skums, Alex Zelikovsky |
Scalable Reconstruction of SARS-CoV-2 Phylogeny with Recurrent Mutations. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 28(11), pp. 1130-1141, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Sarwan Ali, Simone Ciccolella, Lorenzo Lucarella, Gianluca Della Vedova, Murray Patterson |
Simpler and Faster Development of Tumor Phylogeny Pipelines. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 28(11), pp. 1142-1155, 2021. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Giulia Bernardini 0001, Paola Bonizzoni, Pawel Gawrychowski |
Incomplete Directed Perfect Phylogeny in Linear Time. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WADS ![In: Algorithms and Data Structures - 17th International Symposium, WADS 2021, Virtual Event, August 9-11, 2021, Proceedings, pp. 172-185, 2021, Springer, 978-3-030-83507-1. The full citation details ...](Pics/full.jpeg) |
2021 |
DBLP DOI BibTeX RDF |
|
16 | Vladimir Smirnov |
Large-scale methods for multiple sequence alignment and phylogeny estimation ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2021 |
RDF |
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16 | Changchuan Yin, Stephen S.-T. Yau |
Whole-genome phylogeny of giant viruses by Fourier transform. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Commun. Inf. Syst. ![In: Commun. Inf. Syst. 20(1), pp. 61-76, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Sriram P. Chockalingam, Jodh Pannu, Sahar Hooshmand, Sharma V. Thankachan, Srinivas Aluru |
An alignment-free heuristic for fast sequence comparisons with applications to phylogeny reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 21-S(6), pp. 404, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Uciel Chorostecki, Manuel Molina, Leszek P. Pryszcz, Toni Gabaldón |
MetaPhOrs 2.0: integrative, phylogeny-based inference of orthology and paralogy across the tree of life. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 48(Webserver-Issue), pp. W553-W557, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Camir Ricketts, Daniel Seidman, Victoria Popic, Fereydoun Hormozdiari, Serafim Batzoglou, Iman Hajirasouliha |
Meltos: multi-sample tumor phylogeny reconstruction for structural variants. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(4), pp. 1082-1090, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Yufeng Wu |
Accurate and efficient cell lineage tree inference from noisy single cell data: the maximum likelihood perfect phylogeny approach. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(3), pp. 742-750, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
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16 | Erfan Sadeqi Azer, Farid Rashidi Mehrabadi, Salem Malikic, Xuan Cindy Li, Osnat Bartok, Kevin Litchfield, Ronen Levy, Yardena Samuels, Alejandro A. Schäffer, E. Michael Gertz, Chi-Ping Day, Eva Pérez-Guijarro, Kerrie Marie, Maxwell P. Lee, Glenn Merlino, Funda Ergün, Süleyman Cenk Sahinalp |
PhISCS-BnB: a fast branch and bound algorithm for the perfect tumor phylogeny reconstruction problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(Supplement-1), pp. i169-i176, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Kevin McDonnell, Nicholas Waters, Enda Howley, Florence Abram |
Chordomics: a visualization tool for linking function to phylogeny in microbiomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(4), pp. 1309-1310, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Patrick H. Bradley, Katherine S. Pollard |
phylogenize: correcting for phylogeny reveals genes associated with microbial distributions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 36(4), pp. 1289-1290, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Sudipta Banerjee, Arun Ross |
Face Phylogeny Tree Using Basis Functions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2002.09068, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP BibTeX RDF |
|
16 | Wai-Tong Louis Fan, Brandon Legried, Sebastien Roch |
Impossibility of phylogeny reconstruction from k-mer counts. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2010.14460, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP BibTeX RDF |
|
16 | Giulia Bernardini 0001, Paola Bonizzoni, Pawel Gawrychowski |
Incomplete Directed Perfect Phylogeny in Linear Time. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/2010.05644, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP BibTeX RDF |
|
16 | Sudipta Banerjee, Arun Ross |
Face Phylogeny Tree Using Basis Functions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Trans. Biom. Behav. Identity Sci. ![In: IEEE Trans. Biom. Behav. Identity Sci. 2(4), pp. 310-325, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Bojan Krtenic, Adrian Drazic, Thomas Arnesen, Nathalie Reuter |
Classification and phylogeny for the annotation of novel eukaryotic GNAT acetyltransferases. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 16(12), 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Zhi-Zhong Chen, Shohei Ueta, Jingyu Li, Lusheng Wang 0001 |
Computing a Consensus Phylogeny via Leaf Removal. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Comput. Biol. ![In: J. Comput. Biol. 27(2), pp. 175-188, 2020. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Gryte Satas, Simone Zaccaria, Geoffrey Mon, Benjamin J. Raphael |
Single-Cell Tumor Phylogeny Inference with Copy-Number Constrained Mutation Losses. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB ![In: Research in Computational Molecular Biology - 24th Annual International Conference, RECOMB 2020, Padua, Italy, May 10-13, 2020, Proceedings, pp. 273, 2020, Springer, 978-3-030-45256-8. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Lamis Sharawy, Maha Tantawy, Yara Ahmed, Ahmed Taha, Omar Soliman, Tamer M. Ibrahim, Mohamed El-Hadidi |
In-Silico Comparative Analysis of Egyptian SARS CoV-2 with Other Populations: a Phylogeny and Mutation Analysis. ![Search on Bibsonomy](Pics/bibsonomy.png) |
NILES ![In: 2nd Novel Intelligent and Leading Emerging Sciences Conference, NILES 2020, Giza, Egypt, October 24-26, 2020, pp. 618-622, 2020, IEEE, 978-1-7281-8226-1. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Pavlos Malakonakis, Andreas Brokalakis, Nikolaos Alachiotis 0001, Euripides Sotiriades, Apostolos Dollas |
Exploring Modern FPGA Platforms for Faster Phylogeny Reconstruction with RAxML. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBE ![In: 20th IEEE International Conference on Bioinformatics and Bioengineering, BIBE 2020, Cincinnati, OH, USA, October 26-28, 2020, pp. 97-104, 2020, IEEE, 978-1-7281-9574-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Michael Zhou, Yongsheng Bai |
Bioinf-PHP: Bioinformatics Pipeline for Protein Homology and Phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CLOUD ![In: Cloud Computing - CLOUD 2020 - 13th International Conference, Held as Part of the Services Conference Federation, SCF 2020, Honolulu, HI, USA, September 18-20, 2020, Proceedings, pp. 261-269, 2020, Springer, 978-3-030-59634-7. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Pasquale Ardimento, Mario Luca Bernardi, Marta Cimitile |
Malware Phylogeny Analysis using Data-Aware Declarative Process Mining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
EAIS ![In: 2020 IEEE Conference on Evolving and Adaptive Intelligent Systems, EAIS 2020, Bari, Italy, May 27-29, 2020, pp. 1-8, 2020, IEEE, 978-1-7281-4384-2. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Saurav Dhar, Chengchen Zhang, Ion I. Mandoiu, Mukul S. Bansal |
TNet: Phylogeny-Based Inference of Disease Transmission Networks Using Within-Host Strain Diversity. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications - 16th International Symposium, ISBRA 2020, Moscow, Russia, December 1-4, 2020, Proceedings, pp. 203-216, 2020, Springer, 978-3-030-57820-6. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Leah L. Weber, Mohammed El-Kebir |
Phyolin: Identifying a Linear Perfect Phylogeny in Single-Cell DNA Sequencing Data of Tumors. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: 20th International Workshop on Algorithms in Bioinformatics, WABI 2020, September 7-9, 2020, Pisa, Italy (Virtual Conference)., pp. 5:1-5:14, 2020, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 978-3-95977-161-0. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Xilin Yu, Thien Le, Sarah A. Christensen, Erin K. Molloy, Tandy J. Warnow |
Advancing Divide-And-Conquer Phylogeny Estimation Using Robinson-Foulds Supertrees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: 20th International Workshop on Algorithms in Bioinformatics, WABI 2020, September 7-9, 2020, Pisa, Italy (Virtual Conference)., pp. 15:1-15:17, 2020, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 978-3-95977-161-0. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Takuya Moriyama, Seiya Imoto, Satoru Miyano, Rui Yamaguchi |
Theoretical Foundation of the Performance of Phylogeny-Based Somatic Variant Detection. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISMCO ![In: Mathematical and Computational Oncology - Second International Symposium, ISMCO 2020, San Diego, CA, USA, October 8-10, 2020, Proceedings, pp. 87-101, 2020, Springer, 978-3-030-64510-6. The full citation details ...](Pics/full.jpeg) |
2020 |
DBLP DOI BibTeX RDF |
|
16 | Phanucheep Chotnithi |
Efficient Similarity Measures in NGS Genome Data Comparison for Phylogeny Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
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2020 |
RDF |
|
16 | Gryte Satas |
Tumor Phylogeny Reconstruction from DNA Sequencing Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
|
2020 |
RDF |
|
16 | Mario Luca Bernardi, Marta Cimitile, Damiano Distante, Fabio Martinelli, Francesco Mercaldo |
Dynamic malware detection and phylogeny analysis using process mining. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Int. J. Inf. Sec. ![In: Int. J. Inf. Sec. 18(3), pp. 257-284, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
16 | Phanucheep Chotnithi, Hong Van Le, Atsuhiro Takasu |
An Effective Parameter-free Comparison of NGS Short Reads for Phylogeny Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
J. Inf. Process. ![In: J. Inf. Process. 27, pp. 730-741, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
16 | Erin K. Molloy, Tandy J. Warnow |
Statistically consistent divide-and-conquer pipelines for phylogeny estimation using NJMerge. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithms Mol. Biol. ![In: Algorithms Mol. Biol. 14(1), pp. 14:1-14:17, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Qiuyi Zhang 0001, Satish Rao, Tandy J. Warnow |
Constrained incremental tree building: new absolute fast converging phylogeny estimation methods with improved scalability and accuracy. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithms Mol. Biol. ![In: Algorithms Mol. Biol. 14(1), pp. 2:1-2:12, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
|
16 | Nan Zhu, Junge Shen |
Image phylogeny tree construction based on local inheritance relationship correction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Multim. Tools Appl. ![In: Multim. Tools Appl. 78(5), pp. 6119-6138, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Hosein Toosi, Ali Moeini, Iman Hajirasouliha |
BAMSE: Bayesian model selection for tumor phylogeny inference among multiple samples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 20-S(11), pp. 282:1-282:9, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Emanuel Maldonado, Agostinho Antunes |
LMAP_S: Lightweight Multigene Alignment and Phylogeny eStimation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 20(1), pp. 739, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Carlos J. Rivera-Rivera, Juan I. Montoya-Burgos |
LSX: automated reduction of gene-specific lineage evolutionary rate heterogeneity for multi-gene phylogeny inference. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BMC Bioinform. ![In: BMC Bioinform. 20(1), pp. 420:1-420:4, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Nikola Jovanovic 0002, Alexander S. Mikheyev |
Interactive web-based visualization and sharing of phylogenetic trees using phylogeny.IO. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Nucleic Acids Res. ![In: Nucleic Acids Res. 47(Webserver-Issue), pp. W266-W269, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Yaokun Wu, Yanzhen Xiong, Soesoe Zaw |
Competition Numbers and Phylogeny Numbers: Uniform Complete Multipartite Graphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Graphs Comb. ![In: Graphs Comb. 35(3), pp. 653-667, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | He-Chuan Yang, Bingxin Lu, Lan Huong Lai, Abner Herbert Lim, Jacob Josiah Santiago Alvarez, Weiwei Zhai |
PSiTE: a Phylogeny guided Simulator for Tumor Evolution. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 35(17), pp. 3148-3150, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Nuraini Aguse, Yuanyuan Qi, Mohammed El-Kebir |
Summarizing the solution space in tumor phylogeny inference by multiple consensus trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 35(14), pp. i408-i416, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Surjyendu Ray, Bei Jia, Sam Safavi, Tim van Opijnen, Ralph Isberg, Jason Rosch, José Bento 0001 |
Exact inference under the perfect phylogeny model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1908.08623, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP BibTeX RDF |
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16 | Chad Clark, Attila Egri-Nagy, Andrew R. Francis, Volker Gebhardt |
Bacterial phylogeny in the Cayley graph. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Discret. Math. Algorithms Appl. ![In: Discret. Math. Algorithms Appl. 11(5), pp. 1950059:1-1950059:14, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | David Fernández-Baca, Lei Liu |
Tree Compatibility, Incomplete Directed Perfect Phylogeny, and Dynamic Graph Connectivity: An Experimental Study. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithms ![In: Algorithms 12(3), pp. 53, 2019. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Thien Le, Aaron Sy, Erin K. Molloy, Qiuyi (Richard) Zhang, Satish Rao, Tandy J. Warnow |
Using INC Within Divide-and-Conquer Phylogeny Estimation. ![Search on Bibsonomy](Pics/bibsonomy.png) |
AlCoB ![In: Algorithms for Computational Biology - 6th International Conference, AlCoB 2019, Berkeley, CA, USA, May 28-30, 2019, Proceedings, pp. 167-178, 2019, Springer, 978-3-030-18173-4. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Muhammad Ali Nayeem, Md. Shamsuzzoha Bayzid, Atif Hasan Rahman 0001, Rifat Shahriyar, M. Sohel Rahman |
A 'phylogeny-aware' multi-objective optimization approach for computing MSA. ![Search on Bibsonomy](Pics/bibsonomy.png) |
GECCO ![In: Proceedings of the Genetic and Evolutionary Computation Conference, GECCO 2019, Prague, Czech Republic, July 13-17, 2019, pp. 577-585, 2019, ACM, 978-1-4503-6111-8. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Zhi-Zhong Chen, Shohei Ueta, Jingyu Li, Lusheng Wang 0001 |
Computing a Consensus Phylogeny via Leaf Removal. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ISBRA ![In: Bioinformatics Research and Applications - 15th International Symposium, ISBRA 2019, Barcelona, Spain, June 3-6, 2019, Proceedings, pp. 3-15, 2019, Springer, 978-3-030-20241-5. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Jyotsna Talreja Wassan, Huiru Zheng, Haiying Wang 0001, Fiona Browne, Paul Walsh, Timmy Manning, Richard J. Dewhurst, Rainer Roehe |
A Phylogeny-aware Feature Ranking for Classification of Cattle Rumen Microbiome. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: 2019 IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2019, San Diego, CA, USA, November 18-21, 2019, pp. 1900-1906, 2019, IEEE, 978-1-7281-1867-3. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Stéphane Chrétien, Christophe Guyeux |
Efficient Online Laplacian Eigenmap Computation for Dimensionality Reduction in Molecular Phylogeny via Optimisation on the Sphere. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IWBBIO (1) ![In: Bioinformatics and Biomedical Engineering - 7th International Work-Conference, IWBBIO 2019, Granada, Spain, May 8-10, 2019, Proceedings, Part I, pp. 441-452, 2019, Springer, 978-3-030-17937-3. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Sudipta Banerjee, Arun Ross |
Face Phylogeny Tree: Deducing Relationships Between Near-Duplicate Face Images Using Legendre Polynomials and Radial Basis Functions. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BTAS ![In: 10th IEEE International Conference on Biometrics Theory, Applications and Systems, BTAS 2019, Tampa, FL, USA, September 23-26, 2019, pp. 1-9, 2019, IEEE, 978-1-7281-1522-1. The full citation details ...](Pics/full.jpeg) |
2019 |
DBLP DOI BibTeX RDF |
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16 | Bingyu Shen 0001, Christopher W. Forstall, Anderson de Rezende Rocha, Walter J. Scheirer |
Practical Text Phylogeny for Real-World Settings. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE Access ![In: IEEE Access 6, pp. 41002-41012, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Ademir Hujdurovic, Ursa Kacar, Martin Milanic, Bernard Ries, Alexandru I. Tomescu |
Complexity and Algorithms for Finding a Perfect Phylogeny from Mixed Tumor Samples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
IEEE ACM Trans. Comput. Biol. Bioinform. ![In: IEEE ACM Trans. Comput. Biol. Bioinform. 15(1), pp. 96-108, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
16 | Mohammed El-Kebir |
SPhyR: tumor phylogeny estimation from single-cell sequencing data under loss and error. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(17), pp. i671-i679, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Christopher Monit, Richard A. Goldstein |
SubRecon: ancestral reconstruction of amino acid substitutions along a branch in a phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(13), pp. 2297-2299, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Eugene Urrutia, Hao Chen 0064, Zilu Zhou, Nancy Ruonan Zhang, Yuchao Jiang |
Integrative pipeline for profiling DNA copy number and inferring tumor phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(12), pp. 2126-2128, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Jesse Eaton, Jingyi Wang, Russell Schwartz |
Deconvolution and phylogeny inference of structural variations in tumor genomic samples. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 34(13), pp. i357-i365, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Leo van Iersel, Mark Jones 0001, Steven Kelk |
A third strike against perfect phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1804.07232, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP BibTeX RDF |
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16 | Bei Jia, Surjyendu Ray, Sam Safavi, José Bento 0001 |
Efficient Projection onto the Perfect Phylogeny Model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1811.01129, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP BibTeX RDF |
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16 | Patrick H. Bradley, Stephen Nayfach, Katherine S. Pollard |
Phylogeny-corrected identification of microbial gene families relevant to human gut colonization. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 14(8), 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Erin K. Molloy, Tandy J. Warnow |
NJMerge: A Generic Technique for Scaling Phylogeny Estimation Methods and Its Application to Species Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics - 16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings, pp. 260-276, 2018, Springer, 978-3-030-00833-8. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
16 | Dikshant Pradhan, Mohammed El-Kebir |
On the Non-uniqueness of Solutions to the Perfect Phylogeny Mixture Problem. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics - 16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings, pp. 277-293, 2018, Springer, 978-3-030-00833-8. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Thomas Dencker, Chris-André Leimeister, Michael Gerth, Christoph Bleidorn, Sagi Snir, Burkhard Morgenstern |
Multi-SpaM: A Maximum-Likelihood Approach to Phylogeny Reconstruction Using Multiple Spaced-Word Matches and Quartet Trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
RECOMB-CG ![In: Comparative Genomics - 16th International Conference, RECOMB-CG 2018, Magog-Orford, QC, Canada, October 9-12, 2018, Proceedings, pp. 227-241, 2018, Springer, 978-3-030-00833-8. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Giovanni Acampora, Mario Luca Bernardi, Marta Cimitile, Genoveffa Tortora, Autilia Vitiello |
A Fuzzy Clustering-based Approach to study Malware Phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
FUZZ-IEEE ![In: 2018 IEEE International Conference on Fuzzy Systems, FUZZ-IEEE 2018, Rio de Janeiro, Brazil, July 8-13, 2018, pp. 1-8, 2018, IEEE, 978-1-5090-6020-7. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Kiran Tomlinson, Layla Oesper |
Examining Tumor Phylogeny Inference in Noisy Sequencing Data. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018, Madrid, Spain, December 3-6, 2018, pp. 36-43, 2018, IEEE Computer Society, 978-1-5386-5488-0. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Timmy Manning, Jyotsna Talreja Wassan, Cintia C. Palu, Haiying Wang 0001, Fiona Browne, Huiru Zheng, Brian Kelly, Paul Walsh |
Phylogeny-Aware Deep 1-Dimensional Convolutional Neural Network for the Classification of Metagenomes. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018, Madrid, Spain, December 3-6, 2018, pp. 1826-1831, 2018, IEEE Computer Society, 978-1-5386-5488-0. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Jyotsna Talreja Wassan, Haiying Wang 0001, Fiona Browne, Huiru Zheng |
PAAM-ML: A novel Phylogeny and Abundance aware Machine Learning Modelling Approach for Microbiome Classification. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BIBM ![In: IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2018, Madrid, Spain, December 3-6, 2018, pp. 44-49, 2018, IEEE Computer Society, 978-1-5386-5488-0. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
|
16 | Bei Jia, Surjyendu Ray, Sam Safavi, José Bento 0001 |
Efficient Projection onto the Perfect Phylogeny Model. ![Search on Bibsonomy](Pics/bibsonomy.png) |
NeurIPS ![In: Advances in Neural Information Processing Systems 31: Annual Conference on Neural Information Processing Systems 2018, NeurIPS 2018, December 3-8, 2018, Montréal, Canada., pp. 4108-4118, 2018. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP BibTeX RDF |
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16 | Qiuyi (Richard) Zhang, Satish Rao, Tandy J. Warnow |
New Absolute Fast Converging Phylogeny Estimation Methods with Improved Scalability and Accuracy. ![Search on Bibsonomy](Pics/bibsonomy.png) |
WABI ![In: 18th International Workshop on Algorithms in Bioinformatics, WABI 2018, August 20-22, 2018, Helsinki, Finland, pp. 8:1-8:12, 2018, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 978-3-95977-082-8. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Rafael L. Fernandes, Rogério Güths, Guilherme P. Telles, Nalvo F. Almeida, Maria Emília M. T. Walter |
A Genetic Algorithm for Character State Live Phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BSB ![In: Advances in Bioinformatics and Computational Biology - 11th Brazilian Symposium on Bioinformatics, BSB 2018, Niterói, Brazil, October 30 - November 1, 2018, Proceedings, pp. 114-123, 2018, Springer, 978-3-030-01721-7. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Jodh Pannu, Sriram P. Chockalingam, Sharma V. Thankachan, Srinivas Aluru |
An Alignment-free Heuristic for Fast Sequence Comparisons with Applications to Phylogeny Reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
BCB ![In: Proceedings of the 2018 ACM International Conference on Bioinformatics, Computational Biology, and Health Informatics, BCB 2018, Washington, DC, USA, August 29 - September 01, 2018, pp. 540, 2018, ACM. The full citation details ...](Pics/full.jpeg) |
2018 |
DBLP DOI BibTeX RDF |
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16 | Paola Bonizzoni, Anna Paola Carrieri, Gianluca Della Vedova, Raffaella Rizzi, Gabriella Trucco |
Species-Driven Persistent Phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Fundam. Informaticae ![In: Fundam. Informaticae 154(1-4), pp. 47-63, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Manuel Bodirsky, Peter Jonsson, Van Trung Pham |
The Complexity of Phylogeny Constraint Satisfaction Problems. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ACM Trans. Comput. Log. ![In: ACM Trans. Comput. Log. 18(3), pp. 23:1-23:42, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Burkhard Morgenstern, Svenja Schöbel, Chris-André Leimeister |
Phylogeny reconstruction based on the length distribution of k-mismatch common substrings. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Algorithms Mol. Biol. ![In: Algorithms Mol. Biol. 12(1), pp. 27:1-27:12, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Paola Bonizzoni, Anna Paola Carrieri, Gianluca Della Vedova, Raffaella Rizzi, Gabriella Trucco |
A colored graph approach to perfect phylogeny with persistent characters. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Theor. Comput. Sci. ![In: Theor. Comput. Sci. 658, pp. 60-73, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Stephen A. Smith, James Pease |
Heterogeneous molecular processes among the causes of how sequence similarity scores can fail to recapitulate phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Briefings Bioinform. ![In: Briefings Bioinform. 18(3), pp. 451-457, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Luyang Huo, Han Zhang 0017, Xueting Huo, Yasong Yang, Xueqiong Li |
pHMM-tree: phylogeny of profile hidden Markov models. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(7), pp. 1093-1095, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Qi Wu 0016, Zu-Guo Yu, Jianyi Yang |
DLTree: efficient and accurate phylogeny reconstruction using the dynamical language method. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(14), pp. 2214-2215, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Chris-André Leimeister, Salma Sohrabi-Jahromi, Burkhard Morgenstern |
Fast and accurate phylogeny reconstruction using filtered spaced-word matches. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(7), pp. 971-979, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Xingjian Xu, Zhaohua Ji, Zhang Zhang 0002 |
CloudPhylo: a fast and scalable tool for phylogeny reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(3), pp. 438-440, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Jan P. Meier-Kolthoff, Markus Göker |
VICTOR: genome-based phylogeny and classification of prokaryotic viruses. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(21), pp. 3396-3404, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Gryte Satas, Benjamin J. Raphael |
Tumor phylogeny inference using tree-constrained importance sampling. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Bioinform. ![In: Bioinform. 33(14), pp. i152-i160, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Cédric Chauve, Mark Jones 0001, Manuel Lafond, Céline Scornavacca, Mathias Weller |
Constructing a Consensus Phylogeny from a Leaf-Removal Distance. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1705.05295, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
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16 | Allan da Silva Pinto, Daniel Moreira, Aparna Bharati, Joel Brogan, Kevin W. Bowyer, Patrick J. Flynn, Walter J. Scheirer, Anderson Rocha 0001 |
Provenance Filtering for Multimedia Phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1706.00447, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
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16 | Aparna Bharati, Daniel Moreira, Allan da Silva Pinto, Joel Brogan, Kevin W. Bowyer, Patrick J. Flynn, Walter J. Scheirer, Anderson Rocha 0001 |
U-Phylogeny: Undirected Provenance Graph Construction in the Wild. ![Search on Bibsonomy](Pics/bibsonomy.png) |
CoRR ![In: CoRR abs/1705.11187, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP BibTeX RDF |
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16 | Dimitris P. Papamichail, Angela Huang, Edward Kennedy, Jan-Lucas Ott, Andrew Miller, Georgios Papamichail |
Live phylogeny with polytomies: Finding the most compact parsimonious trees. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Comput. Biol. Chem. ![In: Comput. Biol. Chem. 69, pp. 171-177, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Filipe de Oliveira Costa, Alberto A. de Oliveira, Pasquale Ferrara, Zanoni Dias, Siome Goldenstein, Anderson Rocha 0001 |
New dissimilarity measures for image phylogeny reconstruction. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Pattern Anal. Appl. ![In: Pattern Anal. Appl. 20(4), pp. 1289-1305, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Seung Chul Lee, Jihoon Choi, Suh-Ryung Kim, Yoshio Sano |
On the phylogeny graphs of degree-bounded digraphs. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Discret. Appl. Math. ![In: Discret. Appl. Math. 233, pp. 83-93, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Olga K. Kamneva |
Genome composition and phylogeny of microbes predict their co-occurrence in the environment. ![Search on Bibsonomy](Pics/bibsonomy.png) |
PLoS Comput. Biol. ![In: PLoS Comput. Biol. 13(2), 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Diane Oyen, Blake Anderson, Kari Sentz, Christine M. Anderson-Cook |
Order priors for Bayesian network discovery with an application to malware phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
Stat. Anal. Data Min. ![In: Stat. Anal. Data Min. 10(5), pp. 343-358, 2017. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Allan da Silva Pinto, Daniel Moreira, Aparna Bharati, Joel Brogan, Kevin W. Bowyer, Patrick J. Flynn, Walter J. Scheirer, Anderson Rocha 0001 |
Provenance filtering for multimedia phylogeny. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIP ![In: 2017 IEEE International Conference on Image Processing, ICIP 2017, Beijing, China, September 17-20, 2017, pp. 1502-1506, 2017, IEEE, 978-1-5090-2175-8. The full citation details ...](Pics/full.jpeg) |
2017 |
DBLP DOI BibTeX RDF |
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16 | Aparna Bharati, Daniel Moreira, Allan da Silva Pinto, Joel Brogan, Kevin W. Bowyer, Patrick J. Flynn, Walter J. Scheirer, Anderson Rocha 0001 |
U-Phylogeny: Undirected provenance graph construction in the wild. ![Search on Bibsonomy](Pics/bibsonomy.png) |
ICIP ![In: 2017 IEEE International Conference on Image Processing, ICIP 2017, Beijing, China, September 17-20, 2017, pp. 1517-1521, 2017, IEEE, 978-1-5090-2175-8. The full citation details ...](Pics/full.jpeg) |
2017 |
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