Search results for "protein"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
45	Yiming Yang, Abhay Harpale, Subramaniam Ganapathy	Protein Identification from Tandem Mass Spectra with Probabilistic Language Modeling.	ECML/PKDD (2)	2009	DBLP DOI BibTeX RDF	Information Retrieval, Proteomics
45	Jafar Razmara, Safaai Bin Deris	A novel method for protein 3D-structure similarity measure based on n-gram modeling.	BIBE	2008	DBLP DOI BibTeX RDF
45	Xiaonan Ji, James Bailey 0001, Kotagiri Ramamohanarao	g-MARS: Protein Classification Using Gapped Markov Chains and Support Vector Machines.	PRIB	2008	DBLP DOI BibTeX RDF
45	Mi-Young Kim	Detection of Protein Subcellular Localization Based on a Full Syntactic Parser and Semantic Information.	FSKD (4)	2008	DBLP DOI BibTeX RDF
45	Abdellali Kelil, Shengrui Wang, Ryszard Brzezinski	A New Alignment-Independent Algorithm for Clustering Protein Sequences.	BIBE	2007	DBLP DOI BibTeX RDF
45	Xinglong Wang	Rule-Based Protein Term Identification with Help from Automatic Species Tagging.	CICLing	2007	DBLP DOI BibTeX RDF
45	Amandeep S. Sidhu, Tharam S. Dillon, Elizabeth Chang 0001	Protein Ontology Instance Store.	OTM Workshops (2)	2007	DBLP DOI BibTeX RDF
45	Bum Ju Lee, Heon Gyu Lee, Dae-Sung Kim, Keun Ho Ryu	Feature Extraction in Spatially-Conserved Regions and Protein Functional Classification.	FBIT	2007	DBLP DOI BibTeX RDF
45	Marco Vassura, Luciano Margara, Piero Fariselli, Rita Casadio	A Graph Theoretic Approach to Protein Structure Selection.	WILF	2007	DBLP DOI BibTeX RDF
45	Shawna L. Thomas, Xinyu Tang, Lydia Tapia, Nancy M. Amato	Simulating Protein Motions with Rigidity Analysis.	RECOMB	2006	DBLP DOI BibTeX RDF
45	Patrick C. H. Ma, Keith C. C. Chan	An Effective Data Mining Technique for Classifying Unaligned Protein Sequences into Functional Families.	CIT	2006	DBLP DOI BibTeX RDF
45	Jae-Hong Eom	Neural Feature Association Rule Mining for Protein Interaction Prediction.	ISNN (2)	2006	DBLP DOI BibTeX RDF
45	Donald A. Adjeroh, Fei Nan	On Compressibility of Protein Sequences.	DCC	2006	DBLP DOI BibTeX RDF
45	Feihong Wu	Comparing Kernels for Predicting Protein Binding Sites from Amino Acid Sequence.	IJCNN	2006	DBLP DOI BibTeX RDF
45	Ross C. Walker, Srivatsan Raman, David Baker	Poster reception - High resolution, high throughput protein structure prediction using IBM Blue Gene supercomputers: predicting CASP targets in record time.	SC	2006	DBLP DOI BibTeX RDF
45	Min Su Lee, Seung-Soo Park, Min Kyung Kim 0002	A Protein Interaction Verification System Based on a Neural Network Algorithm.	CSB Workshops	2005	DBLP DOI BibTeX RDF
45	Lars Linsen, Julia Löcherbach, Matthias Berth, Jörg Bernhardt, Dörte Becher	Differential Protein Expression Analysis via Liquid-Chromatography/Mass-Spectrometry Data Visualization.	IEEE Visualization	2005	DBLP DOI BibTeX RDF
45	Alessandro Dal Palù, Agostino Dovier, Federico Fogolari	Protein Folding Simulation in CCP.	ICLP	2004	DBLP DOI BibTeX RDF
45	Namshik Han, Kyungsook Han	Prediction of Binding Sites in Protein-Nucleic Acid Complexes.	International Conference on Computational Science	2004	DBLP DOI BibTeX RDF
45	Jin Chen 0012, Wynne Hsu, Mong-Li Lee, See-Kiong Ng	Systematic Assessment of High-Throughput Experimental Data for Reliable Protein Interactions Using Network Topology.	ICTAI	2004	DBLP DOI BibTeX RDF
45	Youngho Kim, Jung-Ja Kim, Yonggwan Won, Yongho In	Segmentation of Protein Spots in 2D Gel Electrophoresis Images with Watersheds Using Hierarchical Threshold.	ISCIS	2003	DBLP DOI BibTeX RDF
45	Brendan Mumey, Brian W. Bailey, Edward A. Dratz	Revealing protein structures: a new method for mapping antibody epitopes.	RECOMB	2002	DBLP DOI BibTeX RDF
45	James Aspnes, Julia Hartling, Ming-Yang Kao, Junhyong Kim, Gauri Shah	A Combinatorial Toolbox for Protein Sequence Design and Landscape Analysis in the Grand Canonical Model.	ISAAC	2001	DBLP DOI BibTeX RDF
45	Nicolas Férey, Julien Nelson, Christine Martin, Lorenzo Picinali, Guillaume Bouyer, Alex Tek, Patrick Bourdot, Jean-Marie Burkhardt, Brian F. G. Katz, Mehdi Ammi, Catherine Etchebest, Ludovic Autin	Multisensory VR interaction for protein-docking in the CoRSAIRe project.	Virtual Real.	2009	DBLP DOI BibTeX RDF	Protein docking, Multimodal rendering, Virtual reality, User-centered design
45	Jian Peng 0001, Jinbo Xu	Boosting Protein Threading Accuracy.	RECOMB	2009	DBLP DOI BibTeX RDF	gradient tree boosting, nonlinear scoring function, conditional random fields, regression tree, protein threading
45	Viviane Palodeto, Hernán Terenzi, Jefferson Luiz Brum Marques	Training Neural Networks for Protein Secondary Structure Prediction: The Effects of Imbalanced Data Set.	ICIC (2)	2009	DBLP DOI BibTeX RDF	Artificial neural network training, Imbalanced data, Protein secondary structure prediction
45	Deniz Yörükoglu, Yasin Bakis, Osman Ugur Sezerman	An entropy based heuristic model for predicting functional sub-type divisions of protein families.	GECCO (Companion)	2009	DBLP DOI BibTeX RDF	classification, multiple sequence alignment, protein function
45	Georgina Mirceva, Danco Davcev	HMM Approach for Classifying Protein Structures.	FGIT	2009	DBLP DOI BibTeX RDF	Hidden Markov Model, Protein classification, SCOP
45	Elisabeth Fernandes, Alípio Mário Jorge, Cândida G. Silva, Rui M. M. Brito	A Knowledge Discovery Method for the Characterization of Protein Unfolding Processes.	IWPACBB	2008	DBLP DOI BibTeX RDF	Unfolding Protein, Diseases, Data Mining, Knowledge Discovery
45	Chenyang Cui, Zhen Liu	Classification of 3d Protein based on Structure Information Feature.	BMEI (1)	2008	DBLP DOI BibTeX RDF	3d protein classification, structure information dimension
45	Oliver Korb, Thomas Stützle, Thomas E. Exner	An ant colony optimization approach to flexible protein-ligand docking.	Swarm Intell.	2007	DBLP DOI BibTeX RDF	Cross-docking, Ant colony optimization, Virtual screening, Protein-ligand docking
45	Gemma B. Danks, Susan Stepney, Leo S. D. Caves	Folding Protein-Like Structures with Open L-Systems.	ECAL	2007	DBLP DOI BibTeX RDF	open-L-systems, L-systems, Protein-folding
45	Sasakthi S. Abeysinghe, Tao Ju, Wah Chiu, Matthew L. Baker	Shape modeling and matching in identifying protein structure from low-resolution images.	Symposium on Solid and Physical Modeling	2007	DBLP DOI BibTeX RDF	cryo-EM, graph matching, shape matching, protein structure
45	Zi Huang, Xiaofang Zhou 0001, Dawei Song 0001, Peter Bruza	Dimensionality reduction in patch-signature based protein structure matching.	ADC	2006	DBLP BibTeX RDF	protein structure matching, similarity measure, dimensionality reduction
45	Thang Nguyen Bui, Gnanasekaran Sundarraj	An efficient genetic algorithm for predicting protein tertiary structures in the 2D HP model.	GECCO	2005	DBLP DOI BibTeX RDF	2D HP model, protein folding problem, genetic algorithm
45	Leonid Meyerguz, David Kempe 0001, Jon M. Kleinberg, Ron Elber	The evolutionary capacity of protein structures.	RECOMB	2004	DBLP DOI BibTeX RDF	evolutionary networks, rapidly mixing Markov chains, protein structure, approximate counting
45	Yan Liu 0002, Jaime G. Carbonell, Judith Klein-Seetharaman, Vanathi Gopalakrishnan	Context sensitive vocabulary and its application in protein secondary structure prediction.	SIGIR	2004	DBLP DOI BibTeX RDF	biological language, context sensitive vocabulary, protein secondary structure prediction
45	Bennet Uk, Michela Taufer, Thomas Stricker, Giovanni Settanni, Andrea Cavalli	Implementation and Characterization of Protein Folding on a Desktop Computational Grid - Is CHARMM a Suitable Candidate for the United Devices MetaProcessor?	IPDPS	2003	DBLP DOI BibTeX RDF	widely distributed computing, CHARMM, United Devices MetaProcessor, workload characterization, protein folding, search algorithms, desktop grids
45	Orhan Çamoglu, Tamer Kahveci, Ambuj K. Singh	Towards Index-based Similarity Search for Protein Structure Databases.	CSB	2003	DBLP DOI BibTeX RDF	dataset join, indexing, Protein structures, feature vectors
45	Bennet Uk, Michela Taufer, Thomas Stricker, Giovanni Settanni, Andrea Cavalli, Amedeo Caflisch	Combining Task- and Data Parallelism to Speed up Protein Folding on a Desktop Grid Platform.	CCGRID	2003	DBLP DOI BibTeX RDF	data and task parallelism, CHARMM, United Devices MetaProcessor, computational grid, Protein folding, best-first search
45	Miguel M. F. Bugalho, Arlindo L. Oliveira	An Evaluation of the Impact of Side Chain Positioning on the Accuracy of Discrete Models of Protein Structures.	BSB	2008	DBLP DOI BibTeX RDF	Protein models, discrete state models, side chain positioning, protein folding
45	Gaurav Pandey 0002, Michael S. Steinbach, Rohit Gupta 0003, Tushar Garg, Vipin Kumar 0001	Association analysis-based transformations for protein interaction networks: a function prediction case study.	KDD	2007	DBLP DOI BibTeX RDF	h-confidence, noise reduction, protein interaction networks, association analysis, protein function prediction
45	Carlo Ferrari, Concettina Guerra	Geometric Methods for Protein Structure Comparison.	Mathematical Methods for Protein Structure Analysis and Design	2003	DBLP DOI BibTeX RDF
44	Giuseppe Nicosia, Giovanni Stracquadanio	A Design-for-Yield Algorithm to Assess and Improve the Structural and Energetic Robustness of Proteins and Drugs.	SEA	2009	DBLP DOI BibTeX RDF
44	Tom Milledge, Gaolin Zheng, Tim Mullins, Giri Narasimhan	SBLAST: Structural Basic Local Alignment Searching Tools using Geometric Hashing.	BIBE	2007	DBLP DOI BibTeX RDF
44	Christopher James Langmead, Anthony K. Yan, Ryan H. Lilien, Lincong Wang, Bruce Randall Donald	Large a polynomial-time nuclear vector replacement algorithm for automated NMR resonance assignments.	RECOMB	2003	DBLP DOI BibTeX RDF
44	Christopher James Langmead, Bruce Randall Donald	3D Structural Homology Detection via Unassigned Residual Dipolar Couplings.	CSB	2003	DBLP DOI BibTeX RDF
44	Piero Fariselli, Daniele Molinini, Rita Casadio, Anders Krogh	Prediction of Structurally-Determined Coiled-Coil Domains with Hidden Markov Models.	BIRD	2007	DBLP DOI BibTeX RDF	coiled-coil domains, Hidden Markov models, Protein structure prediction
44	Joonghyun Ryu, Rhohun Park, Deok-Soo Kim	Connolly Surface on an Atomic Structure via Voronoi Diagram of Atoms.	J. Comput. Sci. Technol.	2006	DBLP DOI BibTeX RDF	Connolly/molecular surface, Voronoi diagram of atoms, protein, ?-shape, blending surface
44	Guoying Liu, Ann E. Loraine, Ron Shigeta, Melissa S. Cline, Jill Cheng, Stephen A. Chervitz, David Kulp, Michael A. Siani-Rose	NetAffx: affymetrix probeset annotations.	SAC	2002	DBLP DOI BibTeX RDF	GRAPA, GeneChip, netaffx, microarray, protein domains
44	Deyu Zhou, Yulan He 0001, Chee Keong Kwoh 0001	Training the Hidden Vector State Model from Un-annotated Corpus.	International Conference on Computational Science (2)	2007	DBLP DOI BibTeX RDF	Hidden Vector State Model, information extraction, protein-protein interactions
44	Rui Kuang, Eugene Ie, Ke Wang, Kai Wang, Mahira Siddiqi, Yoav Freund, Christina S. Leslie	Profile-Based String Kernels for Remote Homology Detection and Motif Extraction.	CSB	2004	DBLP DOI BibTeX RDF	protein motifs, support vector machine, kernels, protein classification
44	Jinbo Xu	Fold Recognition by Predicted Alignment Accuracy.	IEEE ACM Trans. Comput. Biol. Bioinform.	2005	DBLP DOI BibTeX RDF	protein fold recognition, SVM regression, Protein structure prediction, protein threading
42	Céline Lefebvre, Wei Keat Lim, Katia Basso, Riccardo Dalla Favera, Andrea Califano	A Context-Specific Network of Protein-DNA and Protein-Protein Interactions Reveals New Regulatory Motifs in Human B Cells.	Systems Biology and Computational Proteomics	2006	DBLP DOI BibTeX RDF	combinatorial regulation, evidence integration, human B cells, naïve Bayes, network motifs
41	Deyu Zhou, Yulan He 0001, Chee Keong Kwoh 0001	From Biomedical Literature to Knowledge: Mining Protein-Protein Interactions.	Computational Intelligence in Biomedicine and Bioinformatics	2008	DBLP DOI BibTeX RDF
41	Tapan Patel, Li Liao	Predicting Protein-Protein Interaction Based on Fisher Scores Extracted from Domain Profiles.	BIBE	2007	DBLP DOI BibTeX RDF
41	Gaëlle Brevier, Romeo Rizzi, Stéphane Vialette	Pattern Matching in Protein-Protein Interaction Graphs.	FCT	2007	DBLP DOI BibTeX RDF
41	Majid Beigi, Andreas Zell	SPSO: Synthetic Protein Sequence Oversampling for Imbalanced Protein Data and Remote Homology Detection.	ISBMDA	2006	DBLP DOI BibTeX RDF
41	Bing Wang 0004, Hau-San Wong, Peng Chen 0001, Hong-Qiang Wang, De-Shuang Huang	Predicting Protein-Protein Interaction Sites using Radial Basis Function Neural Networks.	IJCNN	2006	DBLP DOI BibTeX RDF
41	Jeff M. Phillips, Johannes Rudolph, Pankaj K. Agarwal	Segmenting Motifs in Protein-Protein Interface Surfaces.	WABI	2006	DBLP DOI BibTeX RDF
41	Hyunchul Jang, Jaesoo Lim, Joon-Ho Lim, Soo-Jun Park, Seon-Hee Park, Kyu-Chul Lee	Extracting Protein-Protein Interactions in Biomedical Literature Using an Existing Syntactic Parser.	KDLL	2006	DBLP DOI BibTeX RDF
41	Aki Hasegawa, Kazumi Kuriyama-Matsumura, Xiaomei Yu, Mariko Hatakeyama, Akihiko Konagaya	Software-Aided Mass Spectrometry Analysis for Identification of Protein-Protein Interaction in Signal Transduction Pathways.	ICDE Workshops	2005	DBLP DOI BibTeX RDF
41	Duygu Ucar, Srinivasan Parthasarathy 0001, Sitaram Asur, Chao Wang 0050	Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network.	BIBE	2005	DBLP DOI BibTeX RDF
41	Alexandra Shulman-Peleg, Maxim Shatsky, Ruth Nussinov, Haim J. Wolfson	MAPPIS: Multiple 3D Alignment of Protein-Protein Interfaces.	CompLife	2005	DBLP DOI BibTeX RDF
41	A. Kocatas, Attila Gürsoy, Rengül Çetin-Atalay	Application of Data Mining Techniques to Protein-Protein Interaction Prediction.	ISCIS	2003	DBLP DOI BibTeX RDF
41	Kyungsook Han, Byong-Hyon Ju, Jong H. Park	InterViewer: Dynamic Visualization of Protein-Protein Interactions.	GD	2002	DBLP DOI BibTeX RDF
41	Golan Yona, Michael Levitt	A unified sequence-structure classification of protein sequences: combining sequence and structure in a map of the protein space.	RECOMB	2000	DBLP DOI BibTeX RDF
41	Pingping Sun, Yanan Ma, Yazhuo Wei, Zhiqiang Ma 0003, Linying Lu, Ying Cui, Ping Huang	Application of Improved K-mean Clustering in Predicting Protein-Protein Interactions.	BMEI (1)	2008	DBLP DOI BibTeX RDF	improved K-mean clustering, phylogenetic profile, protein-protein interactions
40	Xiaomin Hu, Jun Zhang 0003, Yun Li 0002	Flexible Protein Folding by Ant Colony Optimization.	Computational Intelligence in Biomedicine and Bioinformatics	2008	DBLP DOI BibTeX RDF
40	Dariusz Mrozek, Andrzej Mastej, Bozena Malysiak	Protein Molecular Viewer for Visualizing Structures Stored in the PDBML Format.	Information Technologies in Biomedicine	2008	DBLP DOI BibTeX RDF
40	Mudassar Iqbal, Alex Alves Freitas, Colin G. Johnson	Protein Interaction Inference Using Particle Swarm Optimization Algorithm.	EvoBIO	2008	DBLP DOI BibTeX RDF
40	Bin Liu 0014, Lei Lin 0001, Xiaolong Wang 0001, Qiwen Dong, Xuan Wang 0002	A Discriminative Method for Protein Remote Homology Detection Based on N-nary Profiles.	BIRD	2008	DBLP DOI BibTeX RDF	remote homology, N-nary profiles, chi-square algorithm, latent semantic analysis
40	Shao-Wu Zhang 0001, Wei Chen 0145, Chunhui Zhao 0002, Yongmei Cheng, Quan Pan 0001	Predicting Protein Quaternary Structure with Multi-scale Energy of Amino Acid Factor Solution Scores and Their Combination.	ICMB	2008	DBLP DOI BibTeX RDF
40	Young-Rae Cho, Woochang Hwang, Aidong Zhang	Optimizing Flow-based Modularization by Iterative Centroid Search in Protein Interaction Networks.	BIBE	2007	DBLP DOI BibTeX RDF
40	Kyungsook Han, Guangyu Cui, Yu Chen	Identifying Functional Groups by Finding Cliques and Near-Cliques in Protein Interaction Networks.	FBIT	2007	DBLP DOI BibTeX RDF
40	Janez Konc, Dusanka Janezic	A Branch and Bound Algorithm for Matching Protein Structures.	ICANNGA (2)	2007	DBLP DOI BibTeX RDF
40	ShaoWu Zhang 0001, YunLong Zhang, JunHui Li, HuiFeng Yang, Yongmei Cheng, GuoPing Zhou	A New Hybrid Approach to Predict Subcellular Localization by Incorporating Protein Evolutionary Conservation Information.	LSMS (2)	2007	DBLP DOI BibTeX RDF
40	Gábor Iván	An Optimized Distance Function for Comparison of Protein Binding Sites.	BSB	2007	DBLP DOI BibTeX RDF
40	Shi-Hua Zhang, Hong-Wei Liu, Xue-Mei Ning, Xiang-Sun Zhang	A Graph-Theoretic Method for Mining Functional Modules in Large Sparse Protein Interaction Networks.	ICDM Workshops	2006	DBLP DOI BibTeX RDF
40	Quan Wen 0001, Jean Gao, Kate Luby-Phelps	Region-based tracking of protein compounds.	ISBI	2006	DBLP DOI BibTeX RDF
40	Zikai Wu, Yong Wang 0001, En-Min Feng, Jin-Cheng Zhao	Protein Structure Comparison Based on a Measure of Information Discrepancy.	TAMC	2006	DBLP DOI BibTeX RDF
40	Boris G. Mirkin, Renata da Silva Camargo, Trevor I. Fenner, George Loizou, Paul Kellam	Aggregating Homologous Protein Families in Evolutionary Reconstructions of Herpesviruses.	CIBCB	2006	DBLP DOI BibTeX RDF
40	James R. Green, Michael J. Korenberg	Nonlinear System Identification Provides Insight Into Protein Folding.	CCECE	2006	DBLP DOI BibTeX RDF
40	Barbara E. Engelhardt, Michael I. Jordan, Steven E. Brenner	A graphical model for predicting protein molecular function.	ICML	2006	DBLP DOI BibTeX RDF
40	Michela Taufer, Chahm An, Andreas Kerstens, Charles L. Brooks III	Predictor@Home: A "Protein Structure Prediction Supercomputer" Based on Public-Resource Computing.	IPDPS	2005	DBLP DOI BibTeX RDF
40	Juan Liu, Longhui Wang, Lianlian He, Feng Shi	Analysis of Toy Model for Protein Folding Based on Particle Swarm Optimization Algorithm.	ICNC (3)	2005	DBLP DOI BibTeX RDF
40	Gihan Dawelbait, Christian Pilarsky, Yanju Zhang, Robert Grützmann, Michael Schroeder 0001	Structural Protein Interactions Predict Kinase-Inhibitor Interactions in Upregulated Pancreas Tumour Genes Expression Data.	CompLife	2005	DBLP DOI BibTeX RDF
40	Frederic T. Stahl, Daniel P. Berrar, Cândida G. Silva, R. J. Rodrigues, Rui M. M. Brito, Werner Dubitzky	Grid warehousing of molecular dynamics protein unfolding data.	CCGRID	2005	DBLP DOI BibTeX RDF
40	Sung-Hee Park, Chan Yong Park, Dae-Hee Kim, Seon Hee Park, Jeong Seop Sim	Protein Structure Abstractionand Automatic Clustering Using Secondary Structure Element Sequences.	ICCSA (2)	2005	DBLP DOI BibTeX RDF
40	Budi Ongkowijaya, Shilin Ding, Xiaoyan Zhu 0001	Various Features with Integrated Strategies for Protein Name Classification.	ISPA Workshops	2005	DBLP DOI BibTeX RDF
40	Pin-Hao Chi, Grant J. Scott, Chi-Ren Shyu	A Fast Protein Structure Retrieval System Using Image-Based Distance Matrices and Multidimensional Index.	BIBE	2004	DBLP DOI BibTeX RDF
40	Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyle Ellrott, Li Wang 0008, Inna Vokler, Philip F. LoCascio, Dong Xu 0002, Ying Xu 0001	A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale.	BIBE	2003	DBLP DOI BibTeX RDF
40	Chern-Hooi Chionh, Zhiyong Huang, Kian-Lee Tan, Zhen Yao	Augmenting SSEs with Structural Properties for Rapid Protein Structure Comparison.	BIBE	2003	DBLP DOI BibTeX RDF
40	Zhi-Zhong Chen, Tao Jiang 0001, Guohui Lin, Romeo Rizzi, Jianjun Wen, Dong Xu 0002, Ying Xu 0001	More Reliable Protein NMR Peak Assignment via Improved 2-Interval Scheduling.	ESA	2003	DBLP DOI BibTeX RDF
40	Rolf Backofen, Sebastian Will	A Constraint-Based Approach to Structure Prediction for Simplified Protein Models That Outperforms Other Existing Methods.	ICLP	2003	DBLP DOI BibTeX RDF
40	Miguel L. Teodoro, George N. Phillips, Lydia E. Kavraki	A dimensionality reduction approach to modeling protein flexibility.	RECOMB	2002	DBLP DOI BibTeX RDF
40	Michele Vendruscolo	Protein folding using inter-residue contacts.	3DPVT	2002	DBLP DOI BibTeX RDF
40	Jon M. Sorenson, Teresa Head-Gordon	Matching simulation and experiment (extended abstract): a new simplified model for simulating protein folding.	RECOMB	2000	DBLP DOI BibTeX RDF
40	Nicolas Thierry-Mieg, Laurent Trilling	InterDB, a Prediction-Oriented Protein Interaction Database for C. elegans.	JOBIM	2000	DBLP DOI BibTeX RDF
39	John Thomas, Naren Ramakrishnan, Chris Bailey-Kellogg	Protein Design by Sampling an Undirected Graphical Model of Residue Constraints.	IEEE ACM Trans. Comput. Biol. Bioinform.	2009	DBLP DOI BibTeX RDF	residue coupling, Markov chain Monte Carlo (MCMC), graphical models, Protein design