Search results for "HIV-1"

Hits ?▲	Authors	Title	Venue	Year	Link
12	Qi Chen, John K. Buolamwini, Jeremy C. Smith, Aixiu Li, Qin Xu, Xiaolin Cheng, Dongqing Wei	Impact of Resistance Mutations on Inhibitor Binding to HIV-1 Integrase.	J. Chem. Inf. Model.	2013	DBLP DOI BibTeX RDF
12	Tomasz Fraczek, Agata Siwek, Piotr Paneth	Assessing Molecular Docking Tools for Relative Biological Activity Prediction: A Case Study of Triazole HIV-1 NNRTIs.	J. Chem. Inf. Model.	2013	DBLP DOI BibTeX RDF
12	Luca Bellucci, Lucilla Angeli, Andrea Tafi, Marco Radi, Maurizio Botta	Unconventional Plasticity of HIV-1 Reverse Transcriptase: How Inhibitors Could Open a Connection "Gate" between Allosteric and Catalytic Sites.	J. Chem. Inf. Model.	2013	DBLP DOI BibTeX RDF
12	Yaping Wang, Fuqin Sun	Global Stability of a HIV-1 Model with General Nonlinear Incidence and Delays.	J. Appl. Math.	2013	DBLP DOI BibTeX RDF
12	Dominik Heider, Robin Senge, Weiwei Cheng, Eyke Hüllermeier	Multilabel classification for exploiting cross-resistance information in HIV-1 drug resistance prediction.	Bioinform.	2013	DBLP DOI BibTeX RDF
12	Mark C. Evans, Agnes C. Paquet, Wei Huang, Laura Napolitano, Arne Frantzell, Jonathan Toma, Eric W. Stawiski, Matthew Bidwell Goetz, Christos J. Petropoulos, Jeannette M. Whitcomb, Eoin Coakley, Mojgan Haddad	A Case-Based Reasoning System for Genotypic Prediction of HIV-1 Co-receptor tropism.	J. Bioinform. Comput. Biol.	2013	DBLP DOI BibTeX RDF
12	Anurag Sethi, Jianhui Tian, Cynthia A. Derdeyn, Bette T. Korber, S. Gnanakaran	A Mechanistic Understanding of Allosteric Immune Escape Pathways in the HIV-1 Envelope Glycoprotein.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
12	Balázs Könnyü, S. Kashif Sadiq, Tamás Turányi, Rita Hírmondó, Barbara Müller, Hans-Georg Kräusslich, Peter V. Coveney, Viktor Müller	Gag-Pol Processing during HIV-1 Virion Maturation: A Systems Biology Approach.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
12	Katarzyna Bozek, Thomas Lengauer, Saleta Sierra, Rolf Kaiser, Francisco S. Domingues	Analysis of Physicochemical and Structural Properties Determining HIV-1 Coreceptor Usage.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
12	Kathryn Miller-Jensen, Ron Skupsky, Priya S. Shah, Adam P. Arkin, David V. Schaffer	Genetic Selection for Context-Dependent Stochastic Phenotypes: Sp1 and TATA Mutations Increase Phenotypic Noise in HIV-1 Gene Expression.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
12	Niko Beerenwinkel, Hesam Montazeri, Heike Schuhmacher, Patrick Knupfer, Viktor von Wyl, Hansjakob Furrer, Manuel Battegay, Bernard Hirschel, Matthias Cavassini, Pietro Vernazza, Enos Bernasconi, Sabine Yerly, Jürg Böni, Thomas Klimkait, Cristina Cellerai, Huldrych F. Günthard	The Individualized Genetic Barrier Predicts Treatment Response in a Large Cohort of HIV-1 Infected Patients.	PLoS Comput. Biol.	2013	DBLP DOI BibTeX RDF
12	Bahareh Honarparvar, Hendrik G. Kruger, Mahmoud E. S. Soliman, Glenn E. M. Maguire, Thavendran Govender	Molecular modelling studies of synthesized pentacyclo-undecane peptides as potential HIV-1 wild type C-SA protease inhibitors.	J. Cheminformatics	2013	DBLP DOI BibTeX RDF
12	Krishnamurthy Kamalanand, Ponnuswamy Mannar Jawahar	Reconstructed bifurcation diagrams of CD4 cells and HIV-1 viral load dynamics under the effect of antiretroviral drugs.	Netw. Model. Anal. Health Informatics Bioinform.	2013	DBLP DOI BibTeX RDF
12	Gongpu Zhao, Juan R. Perilla, Ernest L. Yufenyuy, Xin Meng, Bo Chen, Jiying Ning, Jin-Woo Ahn, Angela M. Gronenborn, Klaus Schulten, Christopher Aiken, Peijun Zhang	Mature HIV-1 capsid structure by cryo-electron microscopy and all-atom molecular dynamics.	Nat.	2013	DBLP DOI BibTeX RDF
12	Fatma A. Alazabi, Mohamed A. Zohdy	Nonlinear Lyapunov-based control for HIV-1 dynamics.	MWSCAS	2013	DBLP DOI BibTeX RDF
12	Filipe R. Casal, A. Pedro Aguiar, João Miranda Lemos	Multiple-model adaptive state estimation of the HIV-1 infection using a moving horizon approach.	ECC	2013	DBLP DOI BibTeX RDF
12	Olivia Bundau, Adina Juratoni, Adalbert Kovács	Hopf bifurcations in a mathematical model of HIV-1 infection with delay.	SACI	2013	DBLP DOI BibTeX RDF
12	Robert W. Harrison, Irene T. Weber, Xiaxia Yu	Sparse Representation for HIV-1 Protease Drug Resistance Prediction.	SDM	2013	DBLP DOI BibTeX RDF
12	Yu Zhang	Detecting Interacting Mutation Clusters in HIV-1 Drug Resistance.	BIOINFORMATICS	2013	DBLP BibTeX RDF
12	Ana Portêlo, João Miranda Lemos, Susana Vinga, Ruy M. Ribeiro, J. P. Cruz, Emília Valadas	Parameter estimation and identifiability of a HIV-1 model.	MED	2013	DBLP DOI BibTeX RDF
12	Kouji Harada	Self-destruction Dynamics of HIV-1 Quasi-species Population in the Presence of Mutagenic Activities.	KES	2013	DBLP DOI BibTeX RDF
12	Isel Grau, Gonzalo Nápoles, María M. García	Predicting HIV-1 Protease and Reverse Transcriptase Drug Resistance Using Fuzzy Cognitive Maps.	CIARP (2)	2013	DBLP DOI BibTeX RDF
12	Isabelle F. T. Viana, Rafael Dhalia, Marco A. Krieger, Ernesto T. A. Marques Jr., Roberto D. Lins	Influence of Scaffold Stability and Electrostatics on Top7-Based Engineered Helical HIV-1 Epitopes.	BSB	2013	DBLP DOI BibTeX RDF
12	Majid Masso	Fast and Accurate Structure-Based Prediction of Resistance to the HIV-1 Integrase Inhibitor Raltegravir.	BCB	2013	DBLP DOI BibTeX RDF
12	Daniel J. Sindhikara, Norio Yoshida, Fumio Hirata	Placevent: An algorithm for prediction of explicit solvent atom distribution - Application to HIV-1 protease and F-ATP synthase.	J. Comput. Chem.	2012	DBLP DOI BibTeX RDF
12	Weiwei Xue, Huanxiang Liu, Xiaojun Yao	Molecular mechanism of HIV-1 integrase-vDNA interactions and strand transfer inhibitor action: A molecular modeling perspective.	J. Comput. Chem.	2012	DBLP DOI BibTeX RDF
12	Silvia Martorano Raimundo, Hyun Mo Yang, Ezio Venturino, Eduardo Massad	Modeling the emergence of HIV-1 drug resistance resulting from antiretroviral therapy: Insights from theoretical and numerical studies.	Biosyst.	2012	DBLP DOI BibTeX RDF
12	Li-Ming Cai, Bao-Zhu Guo, Xue-Zhi Li	Global stability for a delayed HIV-1 infection model with nonlinear incidence of infection.	Appl. Math. Comput.	2012	DBLP DOI BibTeX RDF
12	Pagavathigounder Balasubramaniam, Mani Prakash, Ju H. Park 0001	Hopf bifurcation analysis of delayed model of thymic infection with HIV-1.	Appl. Math. Comput.	2012	DBLP DOI BibTeX RDF
12	Parimal Kar, Volker Knecht	Energetic basis for drug resistance of HIV-1 protease mutants against amprenavir.	J. Comput. Aided Mol. Des.	2012	DBLP DOI BibTeX RDF
12	Flavio Ballante, Ira Musmuca, Garland R. Marshall, Rino Ragno	Comprehensive model of wild-type and mutant HIV-1 reverse transciptases.	J. Comput. Aided Mol. Des.	2012	DBLP DOI BibTeX RDF
12	Pei Yu, Xingfu Zou	Bifurcation Analysis on an HIV-1 Model with Constant Injection of recombinant.	Int. J. Bifurc. Chaos	2012	DBLP DOI BibTeX RDF
12	Hsun-Hsien Chang, Kelly Soderberg, Jason A. Skinner, Jacques Banchereau, Damien Chaussabel, Barton F. Haynes, Marco Ramoni, Norman L. Letvin	Transcriptional network predicts viral set point during acute HIV-1 infection.	J. Am. Medical Informatics Assoc.	2012	DBLP DOI BibTeX RDF
12	Jiangguo Liu, Roberto Muñoz-Alicea, Tingwen Huang, Simon Tavener, Chaoping Chen	A Mathematical Model for Intracellular HIV-1 Gag Protein Transport and its Parallel Numerical Simulations.	ICCS	2012	DBLP DOI BibTeX RDF
12	Eduardo B. de Melo, Márcia M. C. Ferreira	Four-Dimensional Structure-Activity Relationship Model to Predict HIV-1 Integrase Strand Transfer Inhibition using LQTA-QSAR Methodology.	J. Chem. Inf. Model.	2012	DBLP DOI BibTeX RDF
12	Georgios Leonis, Zaneta Czyznikowska, Grigorios Megariotis, Heribert Reis, Manthos G. Papadopoulos	Computational Studies of Darunavir into HIV-1 Protease and DMPC Bilayer: Necessary Conditions for Effective Binding and the Role of the Flaps.	J. Chem. Inf. Model.	2012	DBLP DOI BibTeX RDF
12	Horrick Sharma, Xiaolin Cheng, John K. Buolamwini	Homology Model-Guided 3D-QSAR Studies of HIV-1 Integrase Inhibitors.	J. Chem. Inf. Model.	2012	DBLP DOI BibTeX RDF
12	Daniel G. Jamieson, Martin Gerner, Farzaneh Sarafraz, Goran Nenadic, David L. Robertson	Towards semi-automated curation: using text mining to recreate the HIV-1, human protein interaction database.	Database J. Biol. Databases Curation	2012	DBLP DOI BibTeX RDF
12	J. W. Heal, J. E. Jimenez-Roldan, Stephen A. Wells, R. B. Freedman, Rudolf A. Römer	Inhibition of HIV-1 protease: the rigidity perspective.	Bioinform.	2012	DBLP DOI BibTeX RDF
12	Biswa Ranjan Meher, Mattaparthi Venkata Satish Kumar, Smriti Sharma, Pradipta Bandyopadhyay	Conformational Dynamics of HIV-1 protease: a Comparative molecular Dynamics Simulation Study with Multiple AMBER Force Fields.	J. Bioinform. Comput. Biol.	2012	DBLP DOI BibTeX RDF
12	Watshara Shoombuatong, Sayamon Hongjaisee, Francis Barin, Jeerayut Chaijaruwanich, Tanawan Samleerat	HIV-1 CRF01_AE coreceptor usage prediction using kernel methods based logistic model trees.	Comput. Biol. Medicine	2012	DBLP DOI BibTeX RDF
12	Marcel Joly, José Mauricio Pinto	An in-depth analysis of the HIV-1/AIDS dynamics by comprehensive mathematical modeling.	Math. Comput. Model.	2012	DBLP DOI BibTeX RDF
12	Huantong Yao, Sha Jin	Enhancement of Probe Signal for Screening of HIV-1 Protease Inhibitors in Living Cells.	Sensors	2012	DBLP DOI BibTeX RDF
12	Max von Kleist, Philipp Metzner, Roland Marquet, Christof Schütte	HIV-1 Polymerase Inhibition by Nucleoside Analogs: Cellular- and Kinetic Parameters of Efficacy, Susceptibility and Resistance Selection.	PLoS Comput. Biol.	2012	DBLP DOI BibTeX RDF
12	Rafal Mostowy, Roger D. Kouyos, Ilka Hoof, Trevor Hinkley, Mojgan Haddad, Jeannette M. Whitcomb, Christos J. Petropoulos, Can Kesmir, Sebastian Bonhoeffer	Estimating the Fitness Cost of Escape from HLA Presentation in HIV-1 Protease and Reverse Transcriptase.	PLoS Comput. Biol.	2012	DBLP DOI BibTeX RDF
12	Ben Murrell, Tulio de Oliveira, Chris Seebregts, Sergei L. Kosakovsky Pond, Konrad Scheffler	Modeling HIV-1 Drug Resistance as Episodic Directional Selection.	PLoS Comput. Biol.	2012	DBLP DOI BibTeX RDF
12	Kushal Tripathi, Rajesh Balagam, Nisheeth K. Vishnoi, Narendra M. Dixit	Stochastic Simulations Suggest that HIV-1 Survives Close to Its Error Threshold.	PLoS Comput. Biol.	2012	DBLP DOI BibTeX RDF
12	Elisabeth Humphris-Narayanan, Eyal Akiva, Rocco Varela, Shane Ó Conchúir, Tanja Kortemme	Prediction of Mutational Tolerance in HIV-1 Protease and Reverse Transcriptase Using Flexible Backbone Protein Design.	PLoS Comput. Biol.	2012	DBLP DOI BibTeX RDF
12	Manish Kumar Gupta, Kavita Agarwal, Nutan Prakash, Dev Bukhsh Singh, Krishna Misra	Prediction of miRNA in HIV-1 genome and its targets through artificial neural network: a bioinformatics approach.	Netw. Model. Anal. Health Informatics Bioinform.	2012	DBLP DOI BibTeX RDF
12	Ilia Nouretdinov, Alex Gammerman, Yanjun Qi, Judith Klein-Seetharaman	Determining Confidence of Predicted Interactions Between HIV-1 and Human Proteins Using Conformal Method.	Pacific Symposium on Biocomputing	2012	DBLP BibTeX RDF
12	Caio Souza, Flavio Nobre, Priscila M. V. Lima, Robson Silva, Rodrigo Brindeiro, Felipe M. G. França	Recognition of HIV-1 subtypes and antiretroviral drug resistance using weightless neural networks.	ESANN	2012	DBLP BibTeX RDF
12	Gene M. Ko, A. Srinivas Reddy, Sunil Kumar, Rajni Garg, Barbara A. Bailey, Ahmad R. Hadaegh	Differential evolution-binary particle swarm optimization algorithm for the analysis of aryl β-diketo acids for HIV-1 integrase inhibition.	IEEE Congress on Evolutionary Computation	2012	DBLP DOI BibTeX RDF
12	András Hartmann, Susana Vinga, João Miranda Lemos	Identification of Hiv-1 Dynamics - Estimating the Noise Model, Constant and Time-varying Parameters of Long-term Clinical Data.	BIOINFORMATICS	2012	DBLP BibTeX RDF
12	Kartick Chandra Mondal, Nicolas Pasquier, Anirban Mukhopadhyay 0001, Célia da Costa Pereira, Ujjwal Maulik, Andrea Tettamanzi	Prediction of Protein Interactions on HIV-1-Human PPI Data using a Novel Closure-based Integrated Approach.	BIOINFORMATICS	2012	DBLP BibTeX RDF
12	Alla S. Reddy, Himali Desai, Sunil Kumar, Rajni Garg	Comparison of RSH with shape signatures and MACT technique for shape analysis of HIV-1 protein.	CIBCB	2012	DBLP DOI BibTeX RDF
12	Yi-Chun Lin, Yueh-Min Huang, James Jiunn-Yin Leu	A new logic correlation rule for HIV-1 protease mutation.	Expert Syst. Appl.	2011	DBLP DOI BibTeX RDF
12	Gesham Magombedze, Winston Garira, Eddie Mwenje, Claver Pedzisai Bhunu	Optimal control for HIV-1 multi-drug therapy.	Int. J. Comput. Math.	2011	DBLP DOI BibTeX RDF
12	Razvan Andonie, Levente Fabry-Asztalos, Christopher B. Abdul-Wahid, Sarah Abdul-Wahid, Grant I. Barker, Lukas Magill	Fuzzy ARTMAP Prediction of Biological Activities for Potential HIV-1 Protease Inhibitors Using a Small Molecular Data Set.	IEEE ACM Trans. Comput. Biol. Bioinform.	2011	DBLP DOI BibTeX RDF
12	Haralambos Tzoupis, Georgios Leonis, Serdar Durdagi, Varnavas D. Mouchlis, Thomas M. Mavromoustakos, Manthos G. Papadopoulos	Binding of novel fullerene inhibitors to HIV-1 protease: insight through molecular dynamics and molecular mechanics Poisson-Boltzmann surface area calculations.	J. Comput. Aided Mol. Des.	2011	DBLP DOI BibTeX RDF
12	Jakub Truszkowski, Daniel Gregory Brown	More accurate recombination prediction in HIV-1 using a robust decoding algorithm for HMMs.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
12	Kathleen M. Doherty, Priyanka Nakka, Bracken M. King, Soo-Yon Rhee, Susan P. Holmes, Robert W. Shafer, Mala L. Radhakrishnan	A multifaceted analysis of HIV-1 protease multidrug resistance phenotypes.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
12	Thomas Unterthiner, Anne-Kathrin Schultz, Jan Bulla, Burkhard Morgenstern, Mario Stanke, Ingo Bulla	Detection of viral sequence fragments of HIV-1 subfamilies yet unknown.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
12	Xiaoning Qian, Byung-Jun Yoon	Comparative analysis of protein interaction networks reveals that conserved pathways are susceptible to HIV-1 interception.	BMC Bioinform.	2011	DBLP DOI BibTeX RDF
12	Amit Kumar, Chandrakant Jadhav	Genotypic prediction of resistant mutation in HIV-1 pol gene towards the antiretroviral drugs.	Int. J. Bioinform. Res. Appl.	2011	DBLP DOI BibTeX RDF
12	Anthony K. Felts, Krystal LaBarge, Joseph D. Bauman, Dishaben V. Patel, Daniel Himmel, Eddy Arnold, Michael A. Parniak, Ronald M. Levy	Identification of Alternative Binding Sites for Inhibitors of HIV-1 Ribonuclease H Through Comparative Analysis of Virtual Enrichment Studies.	J. Chem. Inf. Model.	2011	DBLP DOI BibTeX RDF
12	Alfonso T. García-Sosa, Sulev Sild, Kalev Takkis, Uko Maran	Combined Approach Using Ligand Efficiency, Cross-Docking, and Antitarget Hits for Wild-Type and Drug-Resistant Y181C HIV-1 Reverse Transcriptase.	J. Chem. Inf. Model.	2011	DBLP DOI BibTeX RDF
12	Lin-tai Da, Yun-Dong Wu	Theoretical Studies on the Interactions and Interferences of HIV-1 Glycoprotein gp120 and Its Coreceptor CCR5.	J. Chem. Inf. Model.	2011	DBLP DOI BibTeX RDF
12	David W. Wright 0001, Peter V. Coveney	Resolution of Discordant HIV-1 Protease Resistance Rankings Using Molecular Dynamics Simulations.	J. Chem. Inf. Model.	2011	DBLP DOI BibTeX RDF
12	Daniel P. Oehme, David J. D. Wilson, Robert T. C. Brownlee	Effect of Structural Stress on the Flexibility and Adaptability of HIV-1 Protease.	J. Chem. Inf. Model.	2011	DBLP DOI BibTeX RDF
12	Alexander M. Andrianov, Ivan V. Anishchenko, Alexander V. Tuzikov	Discovery of Novel Promising Targets for Anti-AIDS Drug Developments by Computer Modeling: Application to the HIV-1 gp120 V3 Loop.	J. Chem. Inf. Model.	2011	DBLP DOI BibTeX RDF
12	Rui Xu	Global dynamics of an HIV-1 infection model with distributed intracellular delays.	Comput. Math. Appl.	2011	DBLP DOI BibTeX RDF
12	Nicholas E. Newell	Cascade detection for the extraction of localized sequence features; specificity results for HIV-1 protease and structure-function results for the Schellman loop.	Bioinform.	2011	DBLP DOI BibTeX RDF
12	Kristin Kassler, Julia Meier, Jutta Eichler, Heinrich Sticht	Structural Basis for Species Selectivity in the HIV-1 gp120-CD4 Interaction: Restoring Affinity to gp120 in Murine CD4 Mimetic Peptides.	Adv. Bioinformatics	2011	DBLP DOI BibTeX RDF
12	Mattia C. F. Prosperi, Simona Di Giambenedetto, Iuri Fanti, Genny Meini, Bianca Bruzzone, Annapaola Callegaro, Giovanni Penco, Patrizia Bagnarelli, Valeria Micheli, Elisabetta Paolini, Antonio Di Biagio, Valeria Ghisetti, Massimo Di Pietro, Maurizio Zazzi, Andrea De Luca, et al.	A Prognostic Model for Estimating the Time to Virologic Failure in HIV-1 Infected Patients Undergoing a New Combination Antiretroviral Therapy Regimen.	BMC Medical Informatics Decis. Mak.	2011	DBLP DOI BibTeX RDF
12	George Shirreff, Lorenzo Pellis, Oliver Laeyendecker, Christophe Fraser	Transmission Selects for HIV-1 Strains of Intermediate Virulence: A Modelling Approach.	PLoS Comput. Biol.	2011	DBLP DOI BibTeX RDF
12	Joao V. Pinheiro, João Miranda Lemos, Susana Vinga	Nonlinear MPC of HIV-1 infection with periodic inputs.	CDC/ECC	2011	DBLP DOI BibTeX RDF
12	Owain Kenway, David W. Wright 0001, Helmut Heller, André Merzky, Gavin J. Pringle, Jules Wolfrat, Peter V. Coveney, Shantenu Jha	Towards high-throughput, high-performance computational estimation of binding affinities for patient specific HIV-1 protease sequences.	TG	2011	DBLP DOI BibTeX RDF
12	Frank Nani, Mingxian Jin	Computer simulation of a mathematical model of HAART therapy for HIV-1 AIDS.	BMEI	2011	DBLP DOI BibTeX RDF
12	Ye Yan, Chunhai Kou	Stability analysis for a fractional HIV-1 model with time delay.	BMEI	2011	DBLP DOI BibTeX RDF
12	Sergei L. Kosakovsky Pond	Computational analysis of HIV-1 evolution and epidemiology.	BIBM Workshops	2011	DBLP DOI BibTeX RDF
12	Hui Liu, Xiang Liu, Kuo-Chen Chou	Minimal and optimal subsites set of HIV-1 protease cleavage site based on rough set.	iCAST	2011	DBLP DOI BibTeX RDF
12	Alpna Agarwal, Eron Oronsaye, Arthur Nadas, Susan Zolla-Pazner, Timothy Cardozo	CCR5/CXCR4 discriminating sites in the HIV-1 gp120 core.	BCB	2011	DBLP DOI BibTeX RDF
12	Majid Masso	Sequence-based prediction of HIV-1 coreceptor usage: utility of n-grams for representing gp120 V3 loops.	BCB	2011	DBLP DOI BibTeX RDF
12	Anilkumar Sorathiya	Computational modelling approaches to HIV-1 dynamics.		2011	RDF
12	Alexander Thielen	Genotypic analysis of HIV-1 coreceptor usage.		2011	RDF
12	Mahiéddine Kouche, Bedr'Eddine Ainseba	A mathematical model of HIV-1 infection including the saturation effect of healthy cell proliferation.	Int. J. Appl. Math. Comput. Sci.	2010	DBLP DOI BibTeX RDF
12	Andrey A. Toropov, Alla P. Toropova, Emilio Benfenati, Danuta Leszczynska, Jerzy Leszczynski	SMILES-based optimal descriptors: QSAR analysis of fullerene-based HIV-1 PR inhibitors by means of balance of correlations.	J. Comput. Chem.	2010	DBLP DOI BibTeX RDF
12	Vali Zare-shahabadi, Fatemeh Abbasitabar	Application of ant colony optimization in development of models for prediction of anti-HIV-1 activity of HEPT derivatives.	J. Comput. Chem.	2010	DBLP DOI BibTeX RDF
12	Kristof Theys, Koen Deforche, Gertjan Beheydt, Yves Moreau, Kristel Van Laethem, Philippe Lemey, Ricardo Camacho, Soo-Yon Rhee, Robert W. Shafer, Eric Van Wijngaerden, Anne-Mieke Vandamme	Estimating the individualized HIV-1 genetic barrier to resistance using a nelfinavir fitness landscape.	BMC Bioinform.	2010	DBLP DOI BibTeX RDF
12	Aridaman Pandit, Somdatta Sinha	Using genomic signatures for HIV-1 sub-typing.	BMC Bioinform.	2010	DBLP DOI BibTeX RDF
12	Dominik Heider, Jens Verheyen, Daniel Hoffmann	Predicting Bevirimat resistance of HIV-1 from genotype.	BMC Bioinform.	2010	DBLP DOI BibTeX RDF
12	Jingming Ma, Carrie Dykes, Tao Wu, Yangxin Huang, Lisa M. Demeter, Hulin Wu	vFitness: a web-based computing tool for improving estimation of in vitro HIV-1 fitness experiments.	BMC Bioinform.	2010	DBLP DOI BibTeX RDF
12	Elena E. Giorgi, Bob Funkhouser, Gayathri Athreya, Alan S. Perelson, Bette T. Korber, Tanmoy Bhattacharya 0001	Estimating time since infection in early homogeneous HIV-1 samples using a poisson model.	BMC Bioinform.	2010	DBLP DOI BibTeX RDF
12	Majid Masso, Iosif I. Vaisman	Accurate and efficient gp120 V3 loop structure based models for the determination of HIV-1 co-receptor usage.	BMC Bioinform.	2010	DBLP DOI BibTeX RDF
12	Narges Zarrabi, Emiliano Mancini, JocCing Tay, Shayan Shahand, Peter M. A. Sloot	Modeling HIV-1 intracellular replication: two simulation approaches.	ICCS	2010	DBLP DOI BibTeX RDF
12	Gilhan Kim, Yeonjoo Kim, Heuiseok Lim, Hyeoncheol Kim	An MLP-based feature subset selection for HIV-1 protease cleavage site analysis.	Artif. Intell. Medicine	2010	DBLP DOI BibTeX RDF
12	S. Kashif Sadiq, David W. Wright 0001, Owain Kenway, Peter V. Coveney	Accurate Ensemble Molecular Dynamics Binding Free Energy Ranking of Multidrug-Resistant HIV-1 Proteases.	J. Chem. Inf. Model.	2010	DBLP DOI BibTeX RDF
12	Mattia Mori, Ursula Dietrich, Fabrizio Manetti, Maurizio Botta	Molecular Dynamics and DFT Study on HIV-1 Nucleocapsid Protein-7 in Complex with Viral Genome.	J. Chem. Inf. Model.	2010	DBLP DOI BibTeX RDF
12	Martin Sippel, Christoph A. Sotriffer	Molecular Dynamics Simulations of the HIV-1 Integrase Dimerization Interface: Guidelines for the Design of a Novel Class of Integrase Inhibitors.	J. Chem. Inf. Model.	2010	DBLP DOI BibTeX RDF
12	Simone Fulle, Nina Alexandra Christ, Eva Kestner, Holger Gohlke	HIV-1 TAR RNA Spontaneously Undergoes Relevant Apo-to-Holo Conformational Transitions in Molecular Dynamics and Constrained Geometrical Simulations.	J. Chem. Inf. Model.	2010	DBLP DOI BibTeX RDF