Search results for "Homology"

Hits ?▲	Authors	Title	Venue	Year	Link
13	Siquan Xie, Xinyue Chen, Yilin Tang, Shutian Chen, Weili Chen, Lujing Gan	Virtual screening and molecular dynamics simulation of inhibitors from medicine food homology plants based on hand, foot and mouth disease related target EV71 3C protease.	ICBBE	2023	DBLP DOI BibTeX RDF
13	Anson Bastos, Kuldeep Singh 0001, Abhishek Nadgeri, Johannes Hoffart, Manish Singh 0002, Toyotaro Suzumura	Can Persistent Homology provide an efficient alternative for Evaluation of Knowledge Graph Completion Methods?	WWW	2023	DBLP DOI BibTeX RDF
13	Wenbo He, Yunshen Huang, Jinran Qie, Shen Zeng	Value Iteration Algorithm for Solving Shortest Path Problems with Homology Class Constraints.	CDC	2023	DBLP DOI BibTeX RDF
13	Petar Sekuloski, Vesna Dimitrievska Ristovska	Image Classification Using Deep Neural Networks and Persistent Homology.	ICT Innovations	2023	DBLP DOI BibTeX RDF
13	Yibin Yang 0003, Xin Bo, Zitong Wang, Xinrui Shao, Xinjie Xie	Graph representation learning and software homology matching based A study of JAVA code vulnerability detection techniques.	CACML	2023	DBLP DOI BibTeX RDF
13	Joshua Slater, Thomas Weighill	Persistent Homology through Image Segmentation (Student Abstract).	AAAI	2023	DBLP DOI BibTeX RDF
13	Yajing Liu, Christina M. Cole, Chris Peterson 0001, Michael Kirby	ReLU Neural Networks, Polyhedral Decompositions, and Persistent Homology.	TAG-ML	2023	DBLP BibTeX RDF
13	Nicholas O. Malott, Philip A. Wilsey	Scalable Homology Classification through Decomposed Euler Characteristic Curves.	IEEE Big Data	2023	DBLP DOI BibTeX RDF
13	Rohit P. Singh, Philip A. Wilsey	Compact Boundary Matrix from a Polytopal Complex for Computing Persistent Homology.	IEEE Big Data	2023	DBLP DOI BibTeX RDF
13	Javier Lamar-León, Raúl Alonso Baryolo, Edel B. García Reyes, Rocío González-Díaz, Pedro Salgueiro	Abandoned Object Detection Using Persistent Homology.	CIARP	2023	DBLP DOI BibTeX RDF
13	Yongchang Liu, Peiying Li, Shikui Tu, Lei Xu 0001	PEST: A General-Purpose Protein Embedding Model for Homology Search.	BIBM	2023	DBLP DOI BibTeX RDF
13	Hao Yang, Dong Sun, Yi-Jun Cai, Jing Yang, Xin-Yu Si, Shu-Min Zhou, Yan Yan	Learning Topological Representation of 3D Skeleton Dynamics with Persistent Homology for Human Activity Recognition.	BIBM	2023	DBLP DOI BibTeX RDF
13	Ryan Gardner, Joshua Wilkins, Sejal Mistry, Ramkiran Gouripeddi, Julio C. Facelli	Structural Homology of Epitope Binding Mimicry in the Onset of Type 1 Diabetes Mellitus.	BIBM	2023	DBLP DOI BibTeX RDF
13	Yan Yan, Chengdong Li, Jing Xiong, Lei Wang	Learning Topological Representation of Sensor Network with Persistent Homology in HCI Systems.	BIBM	2023	DBLP DOI BibTeX RDF
13	Vincent Peter Grande, Michael T. Schaub	Non-Isotropic Persistent Homology: Leveraging the Metric Dependency of PH.	LoG	2023	DBLP BibTeX RDF
13	Tananun Songdechakraiwut, Bryan M. Krause, Matthew I. Banks, Kirill V. Nourski, Barry D. Van Veen	Wasserstein Distance-Preserving Vector Space of Persistent Homology.	MICCAI (8)	2023	DBLP DOI BibTeX RDF
13	David Loiseaux, Mathieu Carrière, Andrew J. Blumberg	A Framework for Fast and Stable Representations of Multiparameter Persistent Homology Decompositions.	NeurIPS	2023	DBLP BibTeX RDF
13	David Loiseaux, Luis Scoccola, Mathieu Carrière, Magnus Bakke Botnan, Steve Oudot	Stable Vectorization of Multiparameter Persistent Homology using Signed Barcodes as Measures.	NeurIPS	2023	DBLP BibTeX RDF
13	Naoki Nishikawa, Yuichi Ike, Kenji Yamanishi	Adaptive Topological Feature via Persistent Homology: Filtration Learning for Point Clouds.	NeurIPS	2023	DBLP BibTeX RDF
13	Yuankai Luo, Lei Shi 0002, Veronika Thost	Improving Self-supervised Molecular Representation Learning using Persistent Homology.	NeurIPS	2023	DBLP BibTeX RDF
13	Jinri Bao, Zicong Wang, Junli Wang, Chungang Yan	Persistent Homology Based Generative Adversarial Network.	VISIGRAPP (4: VISAPP)	2023	DBLP DOI BibTeX RDF
13	Anowarul Kabir, Asher Moldwin, Amarda Shehu	A Comparative Analysis of Transformer-based Protein Language Models for Remote Homology Prediction.	BCB	2023	DBLP DOI BibTeX RDF
13	Savik Kinger	Quantifying Recombination Bias in Viral Evolution Using Persistent Homology.	BCB	2023	DBLP DOI BibTeX RDF
13	Abir Barbara, Younès Bennani, Joseph Karkazan	On the Use of Persistent Homology to Control the Generalization Capacity of a Neural Network.	ICONIP (8)	2023	DBLP DOI BibTeX RDF
13	Mohd Sabri Ismail, Mohd Salmi Md Noorani, Munira Ismail, Fatimah Abdul Razak	Early Warning Signals of Financial Crises Using Persistent Homology and Critical Slowing Down: Evidence From Different Correlation Tests.	Frontiers Appl. Math. Stat.	2022	DBLP DOI BibTeX RDF
13	Nikolay Nikolov	Homology torsion growth of finitely presented pro-p groups.	Int. J. Algebra Comput.	2022	DBLP DOI BibTeX RDF
13	Yitong Meng, Jinlong Fei	Hidden service publishing flow homology comparison using profile-hidden markov model.	Int. J. Intell. Syst.	2022	DBLP DOI BibTeX RDF
13	Yi-Heng Zhu, Chengxin Zhang, Yan Liu 0038, Gilbert S. Omenn, Peter L. Freddolino, Dong-Jun Yu, Yang Zhang 0040	TripletGO: Integrating Transcript Expression Profiles with Protein Homology Inferences for Gene Function Prediction.	Genom. Proteom. Bioinform.	2022	DBLP DOI BibTeX RDF
13	Guangxing Guo, Yanli Zhao, Chenxu Liu, Yongcan Fu, Xinhua Xi, Lizhong Jin, Dongli Shi, Lin Wang, Yonghong Duan, Jie Huang, Shuping Tan, Guimei Yin	Method for persistent topological features extraction of schizophrenia patients' electroencephalography signal based on persistent homology.	Frontiers Comput. Neurosci.	2022	DBLP DOI BibTeX RDF
13	Daojing He, Xiaohu Yu, Tinghui Li, Sammy Chan, Mohsen Guizani	Firmware Vulnerabilities Homology Detection Based on Clonal Selection Algorithm for IoT Devices.	IEEE Internet Things J.	2022	DBLP DOI BibTeX RDF
13	Ippei Obayashi, Masao Kimura	Persistent homology analysis with nonnegative matrix factorization for 3D voxel data of iron ore sinters.	JSIAM Lett.	2022	DBLP DOI BibTeX RDF
13	Hiroaki Bando, Shizuo Kaji, Takaharu Yaguchi	Causal inference for empirical dynamical systems based on persistent homology.	JSIAM Lett.	2022	DBLP DOI BibTeX RDF
13	Linda Campos-Fernández, Rocío Ortiz-Muñiz, Edith Cortés-Barberena, Sergio Mares Sámano, Ramón Garduño-Juárez, Catalina Soriano-Correa	Imidazole and nitroimidazole derivatives as NADH-fumarate reductase inhibitors: Density functional theory studies, homology modeling, and molecular docking.	J. Comput. Chem.	2022	DBLP DOI BibTeX RDF
13	Jiangyi Shao, Junjie Chen 0004, Bin Liu 0014	ProtRe-CN: Protein Remote Homology Detection by Combining Classification Methods and Network Methods via Learning to Rank.	IEEE ACM Trans. Comput. Biol. Bioinform.	2022	DBLP DOI BibTeX RDF
13	Seungho Choe, Sheela Ramanna	Cubical Homology-Based Machine Learning: An Application in Image Classification.	Axioms	2022	DBLP DOI BibTeX RDF
13	Prachi Loliencar, Giseon Heo	Phenotyping OSA: a time series analysis using fuzzy clustering and persistent homology.	Int. J. Approx. Reason.	2022	DBLP DOI BibTeX RDF
13	Kouji Kashiwa, Takehiro Hirakida, Hiroaki Kouno	Persistent Homology Analysis for Dense QCD Effective Model with Heavy Quarks.	Symmetry	2022	DBLP DOI BibTeX RDF
13	Chi Zhou, Zhetong Dong, Hongwei Lin	Learning persistent homology of 3D point clouds.	Comput. Graph.	2022	DBLP DOI BibTeX RDF
13	Depeng Gao, Jinhao Chen, Zhetong Dong, Hongwei Lin	Connectivity-guaranteed porous synthesis in free form model by persistent homology.	Comput. Graph.	2022	DBLP DOI BibTeX RDF
13	Satoru Watanabe, Hayato Yamana	Topological measurement of deep neural networks using persistent homology.	Ann. Math. Artif. Intell.	2022	DBLP DOI BibTeX RDF
13	Piotr Szymczyk, Grazyna Szymanska, Malgorzata Majewska, Izabela Weremczuk-Jezyna, Michal Kolodziejczyk, Kamila Czarnecka, Pawel Szymanski, Ewa Kochan	Homology modelling and docking studies of strictosidine β-D-glucosidase from Madagascar periwinkle (Catharanthus roseus Bunge).	Int. J. Bioinform. Res. Appl.	2022	DBLP DOI BibTeX RDF
13	Gabriele Beltramo, Primoz Skraba	Persistent homology in ℓ∞ metric.	Comput. Geom.	2022	DBLP DOI BibTeX RDF
13	Janez Konc, Samo Lesnik, Blaz Skrlj, Matej Sova, Matic Proj, Damijan Knez, Stanislav Gobec, Dusanka Janezic	ProBiS-Dock: A Hybrid Multitemplate Homology Flexible Docking Algorithm Enabled by Protein Binding Site Comparison.	J. Chem. Inf. Model.	2022	DBLP DOI BibTeX RDF
13	Jian Feng 0004, Yuqiang Qiao, Ou Ye, Ying Zhang	Detecting phishing webpages via homology analysis of webpage structure.	PeerJ Comput. Sci.	2022	DBLP DOI BibTeX RDF
13	Abigail Hickok, Deanna Needell, Mason A. Porter	Analysis of Spatial and Spatiotemporal Anomalies Using Persistent Homology: Case Studies with COVID-19 Data.	SIAM J. Math. Data Sci.	2022	DBLP DOI BibTeX RDF
13	Alex Chandler, Radmila Sazdanovic	A broken circuit model for chromatic homology theories.	Eur. J. Comb.	2022	DBLP DOI BibTeX RDF
13	Chi Seng Pun, Si Xian Lee, Kelin Xia	Persistent-homology-based machine learning: a survey and a comparative study.	Artif. Intell. Rev.	2022	DBLP DOI BibTeX RDF
13	Donglan Liu, Hao Zhang, Rui Wang, Fangzhe Zhang, Lili Sun, Xin Liu, Lei Ma	A lightweight IoT firmware vulnerability detection scheme based on homology detection.	J. High Speed Networks	2022	DBLP DOI BibTeX RDF
13	Ismail Güzel, Atabey Kaygun	A new non-archimedean metric on persistent homology.	Comput. Stat.	2022	DBLP DOI BibTeX RDF
13	Xiaopeng Jin, Xiaoling Luo, Bin Liu 0014	Correction to: PHR-search: a search framework for protein remote homology detection based on the predicted protein hierarchical relationships.	Briefings Bioinform.	2022	DBLP DOI BibTeX RDF
13	Xiaopeng Jin, Xiaoling Luo, Bin Liu 0014	PHR-search: a search framework for protein remote homology detection based on the predicted protein hierarchical relationships.	Briefings Bioinform.	2022	DBLP DOI BibTeX RDF
13	Claudia He Yun	The Sn-Equivariant Rational Homology of the Tropical Moduli Spaces Δ2, n.	Exp. Math.	2022	DBLP DOI BibTeX RDF
13	Sujoy Mukherjee	On Odd Torsion in Even Khovanov Homology.	Exp. Math.	2022	DBLP DOI BibTeX RDF
13	Michael Lesnick, Matthew Wright 0005	Computing Minimal Presentations and Bigraded Betti Numbers of 2-Parameter Persistent Homology.	SIAM J. Appl. Algebra Geom.	2022	DBLP DOI BibTeX RDF
13	Henry Adams, Baris Coskunuzer	Geometric Approaches to Persistent Homology.	SIAM J. Appl. Algebra Geom.	2022	DBLP DOI BibTeX RDF
13	Marina A. Pak, Dmitry N. Ivankov	Best templates outperform homology models in predicting the impact of mutations on protein stability.	Bioinform.	2022	DBLP DOI BibTeX RDF
13	Philipp Junk, Christina Kiel	HOMELETTE: a unified interface to homology modelling software.	Bioinform.	2022	DBLP DOI BibTeX RDF
13	Subhroshekhar Ghosh, Naoto Miyoshi, Tomoyuki Shirai	Disordered Complex Networks: Energy Optimal Lattices and Persistent Homology.	IEEE Trans. Inf. Theory	2022	DBLP DOI BibTeX RDF
13	Federico Iuricich	Persistence Cycles for Visual Exploration of Persistent Homology.	IEEE Trans. Vis. Comput. Graph.	2022	DBLP DOI BibTeX RDF
13	Ulrich Bauer, Talha Bin Masood, Barbara Giunti, Guillaume Houry, Michael Kerber, Abhishek Rathod	Keeping it sparse: Computing Persistent Homology revised.	CoRR	2022	DBLP DOI BibTeX RDF
13	Emi Minamitani, Ippei Obayashi	Persistent homology-based descriptor for machine-learning potential.	CoRR	2022	DBLP DOI BibTeX RDF
13	Yuhui Zhu, Zhenxiang Chen, Qiben Yan, Shanshan Wang 0003, Enlong Li, Lizhi Peng, Chuan Zhao	Mining Function Homology of Bot Loaders from Honeypot Logs.	CoRR	2022	DBLP DOI BibTeX RDF
13	Zuoyu Yan, Tengfei Ma 0001, Liangcai Gao, Zhi Tang 0001, Yusu Wang 0001, Chao Chen 0012	Neural Approximation of Extended Persistent Homology on Graphs.	CoRR	2022	DBLP BibTeX RDF
13	Abigail Hickok, Benjamin Jarman, Michael Johnson, Jiajie Luo, Mason A. Porter	Persistent Homology for Resource Coverage: A Case Study of Access to Polling Sites.	CoRR	2022	DBLP DOI BibTeX RDF
13	Jiacong Yan, Hongwei Lin	Reasonable thickness determination for implicit porous sheet structure using persistent homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Moo K. Chung, Shih-Gu Huang, Ian C. Carroll, Vince D. Calhoun, H. Hill Goldsmith	Dynamic Persistent Homology for Brain Networks via Wasserstein Graph Clustering.	CoRR	2022	DBLP BibTeX RDF
13	Bill Basener	Understanding Deep Learning using Topological Dynamical Systems, Index Theory, and Homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	John Rick Manzanares, Paul Samuel Ignacio	Stable Homology-Based Cycle Centrality Measures for Weighted Graphs.	CoRR	2022	DBLP DOI BibTeX RDF
13	Aras Asaad, Dashti Ali, Taban Majeed, Rasber Rashid	Persistent Homology for Breast Tumor Classification using Mammogram Scans.	CoRR	2022	DBLP BibTeX RDF
13	Ivan Volkov	Homology-constrained vector quantization entropy regularizer.	CoRR	2022	DBLP DOI BibTeX RDF
13	Ekaterina Khramtsova, Guido Zuccon, Xi Wang, Mahsa Baktashmotlagh	Rethinking Persistent Homology for Visual Recognition.	CoRR	2022	DBLP DOI BibTeX RDF
13	Nicolas Boutry, Laurent Najman, Thierry Géraud	Some equivalence relation between persistent homology and morphological dynamics.	CoRR	2022	DBLP DOI BibTeX RDF
13	Manu Aggarwal, Vipul Periwal	Tight basis cycle representatives for persistent homology of large data sets.	CoRR	2022	DBLP DOI BibTeX RDF
13	Brittany Terese Fasy, Amit Patel	Persistent Homology Transform Cosheaf.	CoRR	2022	DBLP DOI BibTeX RDF
13	Audun D. Myers, Firas A. Khasawneh, Elizabeth Munch	Persistent Homology of Coarse Grained State Space Networks.	CoRR	2022	DBLP DOI BibTeX RDF
13	Andrei C. Bura, Neelav S. Dutta, Thomas J. X. Li, Christian M. Reidys	A computational framework for weighted simplicial homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Renata Turkes, Guido Montúfar, Nina Otter	On the effectiveness of persistent homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Yueqi Cao, Anthea Monod	Approximating Persistent Homology for Large Datasets.	CoRR	2022	DBLP DOI BibTeX RDF
13	Ewerton R. Vieira, Daniel Nakhimovich, Kai Gao, Rui Wang 0087, Jingjin Yu, Kostas E. Bekris	Persistent Homology for Effective Non-Prehensile Manipulation.	CoRR	2022	DBLP BibTeX RDF
13	Tristan Gowdridge, Nikolaos Dervilis, Keith Worden	On topological data analysis for structural dynamics: an introduction to persistent homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Martín Mijangos, Alessandro Bravetti, Pablo Padilla	Musical Stylistic Analysis: A Study of Intervallic Transition Graphs via Persistent Homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Ewerton R. Vieira, Kai Gao, Daniel Nakhimovich, Kostas E. Bekris, Jingjin Yu	Persistent Homology Guided Monte-Carlo Tree Search for Effective Non-Prehensile Manipulation.	CoRR	2022	DBLP DOI BibTeX RDF
13	Bhavana Doppalapudi, Bei Wang 0001, Paul Rosen 0001	Untangling Force-Directed Layouts Using Persistent Homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Stefano De Marchi, Federico Lot, Francesco Marchetti, Davide Poggiali	Variably Scaled Persistence Kernels (VSPKs) for persistent homology applications.	CoRR	2022	DBLP BibTeX RDF
13	Tristan Gowdridge, Nikolaos Devilis, Keith Worden	On topological data analysis for SHM; an introduction to persistent homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Thibault de Surrel, Felix Hensel, Mathieu Carrière, Théo Lacombe, Yuichi Ike, Hiroaki Kurihara, Marc Glisse, Frédéric Chazal	RipsNet: a general architecture for fast and robust estimation of the persistent homology of point clouds.	CoRR	2022	DBLP BibTeX RDF
13	Bernardo Ameneyro, George Siopsis, Vasileios Maroulas	Quantum Persistent Homology for Time Series.	CoRR	2022	DBLP DOI BibTeX RDF
13	Thomas Kahl	On the homology language of HDA models of transition systems.	CoRR	2022	DBLP DOI BibTeX RDF
13	Michael G. Rawson	Linear Run Time of Persistent Homology Computation with GPU Parallelization.	CoRR	2022	DBLP DOI BibTeX RDF
13	Xueyi Bao, Guoxi Liu, Federico Iuricich	TopoEmbedding, a web tool for the interactive analysis of persistent homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Saugata Basu, Negin Karisani, Laxmi Parida	Sequents, barcodes, and homology.	CoRR	2022	DBLP DOI BibTeX RDF
13	Yikai Zhang, Jiachen Yao, Yusu Wang 0001, Chao Chen 0012	On the Convergence of Optimizing Persistent-Homology-Based Losses.	CoRR	2022	DBLP DOI BibTeX RDF
13	Sebastiano Cultrera di Montesano, Ondrej Draganov, Herbert Edelsbrunner, Morteza Saghafian	Persistent Homology of Chromatic Alpha Complexes.	CoRR	2022	DBLP DOI BibTeX RDF
13	Mukti Routray, Swati Vipsita, Amrita Sundaray, Srinidhi Kulkarni	DeepRHD: An efficient hybrid feature extraction technique for protein remote homology detection using deep learning strategies.	Comput. Biol. Chem.	2022	DBLP DOI BibTeX RDF
13	James R. Clough, Nicholas Byrne, Ilkay Öksüz, Veronika A. Zimmer, Julia A. Schnabel, Andrew P. King	A Topological Loss Function for Deep-Learning Based Image Segmentation Using Persistent Homology.	IEEE Trans. Pattern Anal. Mach. Intell.	2022	DBLP DOI BibTeX RDF
13	Sandra Di Rocco, David Eklund, Oliver Gäfvert	Sampling and homology via bottlenecks.	Math. Comput.	2022	DBLP DOI BibTeX RDF
13	Alireza Talesh Jafadideh, Babak Mohammadzadeh Asl	Topological analysis of brain dynamics in autism based on graph and persistent homology.	Comput. Biol. Medicine	2022	DBLP DOI BibTeX RDF
13	Padraig Corcoran, Christopher B. Jones	A persistent homology model of street network connectivity.	Trans. GIS	2022	DBLP DOI BibTeX RDF
13	Zhetong Dong, Jinhao Chen, Hongwei Lin	Topology-controllable Implicit Surface Reconstruction Based on Persistent Homology.	Comput. Aided Des.	2022	DBLP DOI BibTeX RDF
13	Sérgio Branco, João G. Carvalho, Marco S. Reis, Nuno V. Lopes, Jorge Cabral 0001	0-Dimensional Persistent Homology Analysis Implementation in Resource-Scarce Embedded Systems.	Sensors	2022	DBLP DOI BibTeX RDF