Search results for "Phylogeny"

Hits ?▲	Authors	Title	Venue	Year	Link
16	Sudipta Banerjee, Arun Ross	Computing an image Phylogeny Tree from photometrically modified iris images.	IJCB	2017	DBLP DOI BibTeX RDF
16	Özkan Ufuk Nalbantoglu, A. Emre Onuk	A phylogeny-free microbiome dysbiosis detection pipeline for non-invasive disease diagnosis.	EIT	2017	DBLP DOI BibTeX RDF
16	Joanna Moubarak, Maroun Chamoun, Eric Filiol	Comparative study of recent MEA malware phylogeny.	ICCCS	2017	DBLP DOI BibTeX RDF
16	Filippo Utro, Daniel E. Platt, Laxmi Parida	A Quantitative and Qualitative Characterization of k-mer Based Alignment-Free Phylogeny Construction.	CIBB	2017	DBLP DOI BibTeX RDF
16	José Luis Soncco-Álvarez, Mauricio Ayala-Rincón	Variable neighborhood search for the large phylogeny problem using gene order data.	CEC	2017	DBLP DOI BibTeX RDF
16	Graziela S. Araújo, Guilherme P. Telles, Maria Emília M. T. Walter, Nalvo F. Almeida	Distance-based Live Phylogeny.	BIOINFORMATICS	2017	DBLP DOI BibTeX RDF
16	Amine M. Boumaza	Phylogeny of embodied evolutionary robotics.	GECCO (Companion)	2017	DBLP DOI BibTeX RDF
16	Milica Maksimovic, Luca Cuccovillo, Patrick Aichroth	Phylogeny analysis for MP3 and AAC coding transformations.	ICME	2017	DBLP DOI BibTeX RDF
16	Hosein Toosi, Ali Moeini, Iman Hajirasouliha	BAMSE: Bayesian model selection for tumor phylogeny inference among multiple tumor samples.	ICCABS	2017	DBLP DOI BibTeX RDF
16	Gianluca Della Vedova, Murray Patterson, Raffaella Rizzi, Mauricio Soto Gomez	Character-Based Phylogeny Construction and Its Application to Tumor Evolution.	CiE	2017	DBLP DOI BibTeX RDF
16	Cédric Chauve, Mark Jones 0001, Manuel Lafond, Céline Scornavacca, Mathias Weller	Constructing a Consensus Phylogeny from a Leaf-Removal Distance (Extended Abstract).	SPIRE	2017	DBLP DOI BibTeX RDF
16	Abhimanyu Singh Garhwal, Wei Qi Yan 0001, Ajit Narayanan	Image phylogeny for simulating multiple print-scan.	IVCNZ	2017	DBLP DOI BibTeX RDF
16	Simone Milani, Paolo Bestagini, Stefano Tubaro	Video phylogeny tree reconstruction using aging measures.	EUSIPCO	2017	DBLP DOI BibTeX RDF
16	Björn E. Langer	Phenotype-related regulatory element and transcription factor identification via phylogeny-aware discriminative sequence motif scoring		2017	RDF
16	Giuseppe Lancia	Perfect Phylogeny Haplotyping.	Encyclopedia of Algorithms	2016	DBLP DOI BibTeX RDF
16	Olivier Gascuel, Fabio Pardi, Jakub Truszkowski	Distance-Based Phylogeny Reconstruction: Safety and Edge Radius.	Encyclopedia of Algorithms	2016	DBLP DOI BibTeX RDF
16	Jesper Jansson 0001	Directed Perfect Phylogeny (Binary Characters).	Encyclopedia of Algorithms	2016	DBLP DOI BibTeX RDF
16	Jesper Jansson 0001	Perfect Phylogeny (Bounded Number of States).	Encyclopedia of Algorithms	2016	DBLP DOI BibTeX RDF
16	Miklós Csürös	Distance-Based Phylogeny Reconstruction (Fast-Converging).	Encyclopedia of Algorithms	2016	DBLP DOI BibTeX RDF
16	Chunfang Zheng, David Sankoff	Locating rearrangement events in a phylogeny based on highly fragmented assemblies.	BMC Genom.	2016	DBLP DOI BibTeX RDF
16	Marina A. Oikawa, Zanoni Dias, Anderson Rocha 0001, Siome Goldenstein	Distances in multimedia phylogeny.	Int. Trans. Oper. Res.	2016	DBLP DOI BibTeX RDF
16	Md Anowar Hossain, Hairul Azman Roslan, Md. Rezaul Karim 0003, Yoshinobu Kimura	Molecular phylogeny, 3D-structural insights, docking and mechanisms of action of plant beta-galactosidases.	Int. J. Bioinform. Res. Appl.	2016	DBLP DOI BibTeX RDF
16	Xun Gu	Understanding tissue expression evolution: from expression phylogeny to phylogenetic network.	Briefings Bioinform.	2016	DBLP DOI BibTeX RDF
16	Astrid Cruaud, Mathieu Gautier, Jean-Pierre Rossi, Jean-Yves Rasplus, Jérôme Gouzy	RADIS: analysis of RAD-seq data for interspecific phylogeny.	Bioinform.	2016	DBLP DOI BibTeX RDF
16	Mohammed El-Kebir, Gryte Satas, Layla Oesper, Benjamin J. Raphael	Multi-State Perfect Phylogeny Mixture Deconvolution and Applications to Cancer Sequencing.	CoRR	2016	DBLP BibTeX RDF
16	Paola Bonizzoni, Gianluca Della Vedova, Gabriella Trucco	Solving the Persistent Phylogeny Problem in polynomial time.	CoRR	2016	DBLP BibTeX RDF
16	Marina A. Oikawa, Zanoni Dias, Anderson de Rezende Rocha, Siome Goldenstein	Manifold Learning and Spectral Clustering for Image Phylogeny Forests.	IEEE Trans. Inf. Forensics Secur.	2016	DBLP DOI BibTeX RDF
16	Alberto A. de Oliveira, Pasquale Ferrara, Alessia De Rosa, Alessandro Piva, Mauro Barni, Siome Goldenstein, Zanoni Dias, Anderson Rocha 0001	Multiple Parenting Phylogeny Relationships in Digital Images.	IEEE Trans. Inf. Forensics Secur.	2016	DBLP DOI BibTeX RDF
16	Aitor Blanco-Míguez, Jan P. Meier-Kolthoff, Alberto Gutiérrez-Jácome, Markus Göker, Florentino Fdez-Riverola, Borja Sánchez, Anália Lourenço	Improving Phylogeny Reconstruction at the Strain Level Using Peptidome Datasets.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
16	Raquel Bromberg, Nick V. Grishin, Zbyszek Otwinowski	Phylogeny Reconstruction with Alignment-Free Method That Corrects for Horizontal Gene Transfer.	PLoS Comput. Biol.	2016	DBLP DOI BibTeX RDF
16	Mike A. Steel	Phylogeny - discrete and random processes in evolution.		2016	RDF
16	Mohammed El-Kebir, Gryte Satas, Layla Oesper, Benjamin J. Raphael	Multi-state Perfect Phylogeny Mixture Deconvolution and Applications to Cancer Sequencing.	RECOMB	2016	DBLP BibTeX RDF
16	Filipe de Oliveira Costa, Silvia Lameri, Paolo Bestagini, Zanoni Dias, Stefano Tubaro, Anderson Rocha 0001	Hash-based frame selection for video phylogeny.	WIFS	2016	DBLP DOI BibTeX RDF
16	Noe Le Philippe, William Puech, Christophe Fiorio	Phylogeny of JPEG images by ancestor estimation using missing markers on image pairs.	IPTA	2016	DBLP DOI BibTeX RDF
16	Paolo Bestagini, Marco Tagliasacchi, Stefano Tubaro	Image phylogeny tree reconstruction based on region selection.	ICASSP	2016	DBLP DOI BibTeX RDF
16	Jingli Wu, Junwei Wang	A Practical Algorithm for the 2-Species Duplication-Loss Small Phylogeny Problem.	ICIC (1)	2016	DBLP DOI BibTeX RDF
16	Manuel Bodirsky, Peter Jonsson, Van Trung Pham	The Complexity of Phylogeny Constraint Satisfaction.	STACS	2016	DBLP DOI BibTeX RDF
16	Nancy A. Huang, Yen-Jen Oyang	A novel phylogeny-based pattern selection algorithm and its application to microbiomic data.	BIBM	2016	DBLP DOI BibTeX RDF
16	Karl Menzel, Suzy C. P. Renn, Anna M. Ritz	Copy Number Variation and Adaptive Evolutionary Radiations across the African Cichlid phylogeny.	BCB	2016	DBLP DOI BibTeX RDF
16	Marcus Ulbrich	Metabolische Modelle - Aber ohne phylogenetischem Trugschluss! Die Problematik und Optimierung der Funktionsvorhersage von Enzymen und der Erstellung metabolischer Modelle auf Grundlage der Phylogenie am Beispiel der Rhodobacteraceen und Archaeen. (Metabolic models - But without phylogenetical fallacy! The issue and the optimisation of the functional prediction of enzymes and the reconstruction of metabolic models based on phylogeny considering the example of Rhodobacteraceae and archaea.) (PDF / PS)		2016	DOI RDF
16	Dmitry G. Alexeev, Tanya Bibikova, Boris Kovarsky, Damir Melnikov, Alexander V. Tyakht, Vadim Govorun	Bacterial rose garden for metagenomic SNP-based phylogeny visualization.	BioData Min.	2015	DBLP DOI BibTeX RDF
16	Bibhuti Prasad Barik	Animal Actin Phylogeny and RNA Secondary Structure Study.	Int. J. Knowl. Discov. Bioinform.	2015	DBLP DOI BibTeX RDF
16	Guanghong Zuo, Bailin Hao	CVTree3 Web Server for Whole-genome-based and Alignment-free Prokaryotic Phylogeny and Taxonomy.	Genom. Proteom. Bioinform.	2015	DBLP DOI BibTeX RDF
16	Hervé Seligmann	Phylogeny of genetic codes and punctuation codes within genetic codes.	Biosyst.	2015	DBLP DOI BibTeX RDF
16	Sayed M. Sahraeian, Kevin R. Luo, Steven E. Brenner	SIFTER search: a web server for accurate phylogeny-based protein function prediction.	Nucleic Acids Res.	2015	DBLP DOI BibTeX RDF
16	Salem Malikic, Andrew W. McPherson, Nilgun Donmez, Cenk S. Sahinalp	Clonality inference in multiple tumor samples using phylogeny.	Bioinform.	2015	DBLP DOI BibTeX RDF
16	Manuel Bodirsky, Peter Jonsson, Van Trung Pham	The Complexity of Phylogeny Constraint Satisfaction.	CoRR	2015	DBLP BibTeX RDF
16	Ademir Hujdurovic, Ursa Kacar, Martin Milanic, Bernard Ries, Alexandru I. Tomescu	Finding a perfect phylogeny from mixed tumor samples.	CoRR	2015	DBLP BibTeX RDF
16	Nam-phuong Nguyen, Siavash Mirarab, Keerthana Kumar, Tandy J. Warnow	Ultra-large alignments using Phylogeny-aware Profiles.	CoRR	2015	DBLP BibTeX RDF
16	Krishnaraj Thirugnanasambantham, Subramanian Saravanan, Kulandaivelu Karikalan, Rajaraman Bharanidharan, Perumal Lalitha, S. Ilango, Villianur Ibrahim HairulIslam	Identification of evolutionarily conserved Momordica charantia microRNAs using computational approach and its utility in phylogeny analysis.	Comput. Biol. Chem.	2015	DBLP DOI BibTeX RDF
16	Filipe de Oliveira Costa, S. Lameri, Paolo Bestagini, Zanoni Dias, Anderson Rocha 0001, Marco Tagliasacchi, Stefano Tubaro	Phylogeny reconstruction for misaligned and compressed video sequences.	ICIP	2015	DBLP DOI BibTeX RDF
16	Cheng Ling, Chunbao Zhou, Arong Luo, Guoguang Zhao, Tsuyoshi Hamada, Xiaoyan Zhu 0001	Optimizing the Bayesian Inference of Phylogeny on Graphic Processors.	CCGRID	2015	DBLP DOI BibTeX RDF
16	Zhen Meng, Jianhui Li, Zhiduan Chen	A solution to phylogeny assembly for ecologists.	FSKD	2015	DBLP DOI BibTeX RDF
16	Huda Al-Nayyef, Christophe Guyeux, Jacques M. Bahi	Taenia biomolecular phylogeny and the impact of mitochondrial genes on this latter.	CIBCB	2015	DBLP DOI BibTeX RDF
16	Ademir Hujdurovic, Ursa Kacar, Martin Milanic, Bernard Ries, Alexandru I. Tomescu	Finding a Perfect Phylogeny from Mixed Tumor Samples.	WABI	2015	DBLP DOI BibTeX RDF
16	Zhen Meng, Jianhui Li, Tuo Yang, Li Lin, Zhiduan Chen	SoTree: An Automated Phylogeny Assembly Tool for Ecologists from Big Tree.	SmartCity	2015	DBLP DOI BibTeX RDF
16	Dan Gusfield	Persistent phylogeny: a galled-tree and integer linear programming approach.	BCB	2015	DBLP DOI BibTeX RDF
16	Bonnie Kirkpatrick, Kristian Stevens	Perfect Phylogeny Problems with Missing Values.	IEEE ACM Trans. Comput. Biol. Bioinform.	2014	DBLP DOI BibTeX RDF
16	Fei Hu, Yu Lin 0001, Jijun Tang	MLGO: phylogeny reconstruction and ancestral inference from gene-order data.	BMC Bioinform.	2014	DBLP DOI BibTeX RDF
16	Lia Di, Pedro E. Pagan, Daniel Packer, Che L. Martin, Saymon Akther, Girish Ramrattan, Emmanuel F. Mongodin, Claire M. Fraser, Steven E. Schutzer, Benjamin J. Luft, Sherwood R. Casjens, Wei-Gang Qiu	BorreliaBase: a phylogeny-centered browser of Borrelia genomes.	BMC Bioinform.	2014	DBLP DOI BibTeX RDF
16	Margareta Ackerman, Daniel G. Brown 0001, David Loker	Effects of rooting via out-groups on in-group topology in phylogeny.	Int. J. Bioinform. Res. Appl.	2014	DBLP DOI BibTeX RDF
16	Jonathan Binkley, Martha B. Arnaud, Diane O. Inglis, Marek S. Skrzypek, Prachi Shah, Farrell Wymore, Gail Binkley, Stuart R. Miyasato, Matt Simison, Gavin Sherlock	The Candida Genome Database: The new homology information page highlights protein similarity and phylogeny.	Nucleic Acids Res.	2014	DBLP DOI BibTeX RDF
16	Raeece Naeem, Lailatul Hidayah, Mark D. Preston, Taane G. Clark, Arnab Pain	SVAMP: sequence variation analysis, maps and phylogeny.	Bioinform.	2014	DBLP DOI BibTeX RDF
16	Olga Tanaseichuk, James Borneman, Tao Jiang 0001	Phylogeny-based classification of microbial communities.	Bioinform.	2014	DBLP DOI BibTeX RDF
16	Paola Bonizzoni, Anna Paola Carrieri, Gianluca Della Vedova, Gabriella Trucco	Algorithms for the Constrained Perfect Phylogeny with Persistent Characters.	CoRR	2014	DBLP BibTeX RDF
16	Guanghong Zuo, Qiang Li, Bailin Hao	On K-peptide length in composition vector phylogeny of prokaryotes.	Comput. Biol. Chem.	2014	DBLP DOI BibTeX RDF
16	Filipe de Oliveira Costa, Marina A. Oikawa, Zanoni Dias, Siome Goldenstein, Anderson de Rezende Rocha	Image Phylogeny Forests Reconstruction.	IEEE Trans. Inf. Forensics Secur.	2014	DBLP DOI BibTeX RDF
16	Turbo Majumder, Partha Pratim Pande, Ananth Kalyanaraman	Wireless NoC Platforms With Dynamic Task Allocation for Maximum Likelihood Phylogeny Reconstruction.	IEEE Des. Test	2014	DBLP DOI BibTeX RDF
16	R. Anu Sabarish, Tessamma Thomas	Molecular phylogeny analysis using correlation distance and spectral distance.	Int. J. Data Min. Bioinform.	2014	DBLP DOI BibTeX RDF
16	Paola Bonizzoni, Anna Paola Carrieri, Gianluca Della Vedova, Riccardo Dondi, Teresa M. Przytycka	When and How the Perfect Phylogeny Model Explains Evolution.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
16	Alberto A. de Oliveira, Pasquale Ferrara, Alessia De Rosa, Alessandro Piva, Mauro Barni, Siome Goldenstein, Zanoni Dias, Anderson Rocha 0001	Multiple parenting identification in image phylogeny.	ICIP	2014	DBLP DOI BibTeX RDF
16	Rob Gysel	Minimal Triangulation Algorithms for Perfect Phylogeny Problems.	LATA	2014	DBLP DOI BibTeX RDF
16	Li-Qian Zhou, Rui Li, Guo-Sheng Han	A method based on the improved inter-nucleotide distances of genomes to construct vertebrates phylogeny tree.	BMEI	2014	DBLP DOI BibTeX RDF
16	Andrea Melloni, Paolo Bestagini, Simone Milani, Marco Tagliasacchi, Anderson Rocha 0001, Stefano Tubaro	Image phylogeny through dissimilarity metrics fusion.	EUVIP	2014	DBLP DOI BibTeX RDF
16	Iman Hajirasouliha, Benjamin J. Raphael	Reconstructing Mutational History in Multiply Sampled Tumors Using Perfect Phylogeny Mixtures.	WABI	2014	DBLP DOI BibTeX RDF
16	Andrea K. Thomer, Nicholas M. Weber	The phylogeny of a dataset.	ASIST	2014	DBLP DOI BibTeX RDF
16	Thomas Schnattinger	Multi-objective optimization for RNA folding, alignment and phylogeny.		2014	RDF
16	Zanoni Dias, Siome Goldenstein, Anderson Rocha 0001	Exploring heuristic and optimum branching algorithms for image phylogeny.	J. Vis. Commun. Image Represent.	2013	DBLP DOI BibTeX RDF
16	Boram Park, Yoshio Sano	The phylogeny graphs of double partial orders.	Discuss. Math. Graph Theory	2013	DBLP DOI BibTeX RDF
16	Priscila Biller, Pedro Feijão, João Meidanis	Rearrangement-Based Phylogeny Using the Single-Cut-or-Join Operation.	IEEE ACM Trans. Comput. Biol. Bioinform.	2013	DBLP DOI BibTeX RDF
16	Magnus Bordewich, Radu Mihaescu	Accuracy Guarantees for Phylogeny Reconstruction Algorithms Based on Balanced Minimum Evolution.	IEEE ACM Trans. Comput. Biol. Bioinform.	2013	DBLP DOI BibTeX RDF
16	Radu Mihaescu, Cameron Hill, Satish Rao	Fast Phylogeny Reconstruction Through Learning of Ancestral Sequences.	Algorithmica	2013	DBLP DOI BibTeX RDF
16	Daniel G. Brown 0001, Jakub Truszkowski	Fast error-tolerant quartet phylogeny algorithms.	Theor. Comput. Sci.	2013	DBLP DOI BibTeX RDF
16	Michel Habib, Juraj Stacho	Unique perfect phylogeny is intractable.	Theor. Comput. Sci.	2013	DBLP DOI BibTeX RDF
16	Zanoni Dias, Siome Goldenstein, Anderson Rocha 0001	Large-Scale Image Phylogeny: Tracing Image Ancestral Relationships.	IEEE Multim.	2013	DBLP DOI BibTeX RDF
16	Rob Gysel	Potential Maximal Clique Algorithms for Perfect Phylogeny Problems	CoRR	2013	DBLP BibTeX RDF
16	Rob Gysel	Unique Perfect Phylogeny Characterizations via Uniquely Representable Chordal Graphs	CoRR	2013	DBLP BibTeX RDF
16	Guilherme P. Telles, Nalvo F. Almeida, Rosane Minghim, Maria Emília M. T. Walter	Live Phylogeny.	J. Comput. Biol.	2013	DBLP DOI BibTeX RDF
16	Sandro Andreotti, Knut Reinert, Stefan Canzar	The Duplication-Loss Small Phylogeny Problem: From Cherries to Trees.	J. Comput. Biol.	2013	DBLP DOI BibTeX RDF
16	Tandy J. Warnow	Large-Scale Multiple Sequence Alignment and Phylogeny Estimation.	Models and Algorithms for Genome Evolution	2013	DBLP DOI BibTeX RDF
16	Li-qian Zhou, Zhe Li	Analysis of genomes phylogeny using distance method based on similarity metric.	BMEI	2013	DBLP DOI BibTeX RDF
16	Simon A. Berger	Phylogeny-Aware Placement and Alignment Methods for Short Reads.		2013	RDF
16	Jakub Truszkowski, Yanqi Hao, Daniel G. Brown 0001	Towards a practical O(n log n) phylogeny algorithm.	Algorithms Mol. Biol.	2012	DBLP DOI BibTeX RDF
16	Matteo Comin, Davide Verzotto	Alignment-free phylogeny of whole genomes using underlying subwords.	Algorithms Mol. Biol.	2012	DBLP DOI BibTeX RDF
16	Adam M. Szalkowski	Fast and robust multiple sequence alignment with phylogeny-aware gap placement.	BMC Bioinform.	2012	DBLP DOI BibTeX RDF
16	Anatoly Efros, Eran Halperin	Haplotype reconstruction using perfect phylogeny and sequence data.	BMC Bioinform.	2012	DBLP DOI BibTeX RDF
16	Chunfang Zheng, David Sankoff	Gene order in rosid phylogeny, inferred from pairwise syntenies among extant genomes.	BMC Bioinform.	2012	DBLP DOI BibTeX RDF
16	Nikolaos Alachiotis 0001, Simon A. Berger, Alexandros Stamatakis	Coupling SIMD and SIMT architectures to boost performance of a phylogeny-aware alignment kernel.	BMC Bioinform.	2012	DBLP DOI BibTeX RDF
16	Turbo Majumder, Souradip Sarkar, Partha Pratim Pande, Ananth Kalyanaraman	NoC-Based Hardware Accelerator for Breakpoint Phylogeny.	IEEE Trans. Computers	2012	DBLP DOI BibTeX RDF
16	Paola Bonizzoni, Chiara Braghin, Riccardo Dondi, Gabriella Trucco	The binary perfect phylogeny with persistent characters.	Theor. Comput. Sci.	2012	DBLP DOI BibTeX RDF