Search results for "suffix-tree"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
19	Maria Federico, Nadia Pisanti	Suffix tree characterization of maximal motifs in biological sequences.	Theor. Comput. Sci.	2009	DBLP DOI BibTeX RDF
19	Niko Välimäki, Veli Mäkinen, Wolfgang Gerlach, Kashyap Dixit	Engineering a compressed suffix tree implementation.	ACM J. Exp. Algorithmics	2009	DBLP DOI BibTeX RDF
19	Jie Lin, Yue Jiang 0001, Donald A. Adjeroh	The Virtual Suffix Tree.	Int. J. Found. Comput. Sci.	2009	DBLP DOI BibTeX RDF
19	Hongwei Huo, Xiaowu Wang, Vojislav Stojkovic	An Adaptive Suffix Tree Based Algorithm for Repeats Recognition in a DNA Sequence.	IJCBS	2009	DBLP DOI BibTeX RDF
19	Archana Kale, Ujwala Bharambe, M. SashiKumar	A New Suffix Tree Similarity Measure and Labeling for Web Search Results Clustering.	ICETET	2009	DBLP DOI BibTeX RDF
19	Hongshan Jiang, Ying Zhao, Wenguang Chen, Weimin Zheng	Extracting Maximal Degenerate Motifs Based on a Suffix Tree.	BIOCOMP	2009	DBLP BibTeX RDF
19	Han Wen, Nanfeng Xiao, Qiong Chen	Web Snippets Clustering Based on an Improved Suffix Tree Algorithm.	FSKD (1)	2009	DBLP DOI BibTeX RDF
19	Jens Stoye	Suffix Tree Construction in RAM.	Encyclopedia of Algorithms	2008	DBLP DOI BibTeX RDF
19	Paolo Ferragina	Suffix Tree Construction in Hierarchical Memory.	Encyclopedia of Algorithms	2008	DBLP DOI BibTeX RDF
19	Marcel H. Schulz, Sebastian Bauer 0002, Peter N. Robinson	The generalised k-Truncated Suffix Tree for time-and space-efficient searches in multiple DNA or protein sequences.	Int. J. Bioinform. Res. Appl.	2008	DBLP DOI BibTeX RDF
19	Haris Gavranovic	Local search and suffix tree for car-sequencing problem with colors.	Eur. J. Oper. Res.	2008	DBLP DOI BibTeX RDF
19	Yasuto Higa, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda	Reachability on Suffix Tree Graphs.	Int. J. Found. Comput. Sci.	2008	DBLP DOI BibTeX RDF
19	Jin Hu Huang, David M. W. Powers	Suffix Tree Based Approach for Chinese Information Retrieval.	ISDA (3)	2008	DBLP DOI BibTeX RDF
19	Giyasettin Ozcan, Adil Alpkocak	Online Suffix Tree Construction for Streaming Sequences.	CSICC	2008	DBLP DOI BibTeX RDF
19	Min-Feng Wang, Yen-Ching Wu, Meng-Feng Tsai	Exploiting Frequent Episodes in Weighted Suffix Tree to Improve Intrusion Detection System.	AINA Workshops	2008	DBLP DOI BibTeX RDF
19	Yusuke Sawada, Keiichi Tamura, Kotaro Araki, Makoto Takaki, Hajime Kitakami	Parallel Construction Method of a Disk-Based Suffix Tree on a PC Cluster.	PDPTA	2008	DBLP BibTeX RDF
19	Giyasettin Ozcan	Suffix tree indexing for music information retrieval (Müziksel bilgi erişim sistemlerinde sonek ağacı ile dizinleme)		2008	RDF
19	Takahiro Ota, Hiroyoshi Morita	On the Construction of an Antidictionary with Linear Complexity Using the Suffix Tree.	IEICE Trans. Fundam. Electron. Commun. Comput. Sci.	2007	DBLP DOI BibTeX RDF
19	Niko Välimäki, Wolfgang Gerlach, Kashyap Dixit, Veli Mäkinen	Compressed suffix tree - a basis for genome-scale sequence analysis.	Bioinform.	2007	DBLP DOI BibTeX RDF
19	Zuopeng Liang, Kongfa Hu, Ning Ye, Yisheng Dong	An efficient index structure for XML based on generalized suffix tree.	Inf. Syst.	2007	DBLP DOI BibTeX RDF
19	Jianhua Wang, Ruixu Li	A New Cluster Merging Algorithm of Suffix Tree Clustering.	Enterprise Information Systems and Web Technologies	2007	DBLP BibTeX RDF
19	Benjarath Phoophakdee	Trellis: genome-scale disk-based suffix tree indexing algorithm.		2007	RDF
19	Costas S. Iliopoulos, Christos Makris, Yannis Panagis, Katerina Perdikuri, Evangelos Theodoridis, Athanasios K. Tsakalidis	The Weighted Suffix Tree: An Efficient Data Structure for Handling Molecular Weighted Sequences and its Applications.	Fundam. Informaticae	2006	DBLP BibTeX RDF
19	Dan He	Using Suffix Tree to Discover Complex Repetitive Patterns in DNA Sequences.	EMBC	2006	DBLP DOI BibTeX RDF
19	Yasuto Higa, Hideo Bannai, Shunsuke Inenaga, Masayuki Takeda	Reachability on suffix tree graphs.	Stringology	2006	DBLP BibTeX RDF
19	Abhijit Chattaraj, Laxmi Parida	An inexact-suffix-tree-based algorithm for detecting extensible patterns.	Theor. Comput. Sci.	2005	DBLP DOI BibTeX RDF
19	Jacques Nicolas, Patrick Durand, Grégory Ranchy, Sébastien Tempel, Anne-Sophie Valin	Suffix-tree analyser (STAN): looking for nucleotidic and peptidic patterns in chromosomes.	Bioinform.	2005	DBLP DOI BibTeX RDF
19	Rajesh Mysore Pampapathi, Boris G. Mirkin, Mark Levene	A Suffix Tree Approach to Email Filtering	CoRR	2005	DBLP BibTeX RDF
19	Srikanta J. Bedathur, Jayant R. Haritsa	Search-Optimized Suffix-Tree Storage for Biological Applications.	HiPC	2005	DBLP DOI BibTeX RDF
19	Dimitrios Katsaros 0001, Yannis Manolopoulos	A Suffix Tree Based Prediction Scheme for Pervasive Computing Environments.	Panhellenic Conference on Informatics	2005	DBLP DOI BibTeX RDF
19	Sandeep Tata, Richard A. Hankins, Jignesh M. Patel	Practical Suffix Tree Construction.	VLDB	2004	DBLP BibTeX RDF
19	Robert Philip Japp	A disk-resident suffix tree index and generic framework for managing tunable indexes.		2004	RDF
19	Sanghyun Park 0003, Wesley W. Chu, Jeehee Yoon, Jung-Im Won	Similarity search of time-warped subsequences via a suffix tree.	Inf. Syst.	2003	DBLP DOI BibTeX RDF
19	Bingwen Lu, Ting Chen	A suffix tree approach to the interpretation of tandem mass spectra: applications to peptides of non-specific digestion and post-translational modifications.	ECCB	2003	DBLP BibTeX RDF
19	Jens Stoye, Dan Gusfield	Simple and flexible detection of contiguous repeats using a suffix tree.	Theor. Comput. Sci.	2002	DBLP DOI BibTeX RDF
19	Laurent Marsan, Marie-France Sagot	Algorithms for Extracting Structured Motifs Using a Suffix Tree with an Application to Promoter and Regulatory Site Consensus Identification.	J. Comput. Biol.	2000	DBLP DOI BibTeX RDF
19	Paolo Ferragina, Roberto Grossi, Manuela Montangero	On Updating Suffix Tree Labels.	Theor. Comput. Sci.	1998	DBLP DOI BibTeX RDF
19	Jens Stoye, Dan Gusfield	Simple and Flexible Detection of Contiguous Repeats Using a Suffix Tree (Preliminary Version).	CPM	1998	DBLP DOI BibTeX RDF
19	Ying Choi, Tak Wah Lam	Dynamic Suffix Tree and Two-Dimensional Texts Management.	Inf. Process. Lett.	1997	DBLP DOI BibTeX RDF
19	Robert Giegerich, Stefan Kurtz	From Ukkonen to McCreight and Weiner: A Unifying View of Linear-Time Suffix Tree Construction.	Algorithmica	1997	DBLP DOI BibTeX RDF
19	Ramesh Hariharan	Optimal Parallel Suffix Tree Construction.	J. Comput. Syst. Sci.	1997	DBLP DOI BibTeX RDF
19	Raffaele Giancarlo, Roberto Grossi	Suffix tree data structures for matrices.	Pattern Matching Algorithms	1997	DBLP BibTeX RDF
19	Stefan Edelkamp	Suffix Tree Automata in State Space Search.	KI	1997	DBLP DOI BibTeX RDF
19	Suzanne Bunton	A Percolating State Selector for Suffix-Tree Context Models.	Data Compression Conference	1997	DBLP DOI BibTeX RDF
19	Robert Giegerich, Stefan Kurtz	A Comparison of Imperative and Purely Functional Suffix Tree Constructions.	Sci. Comput. Program.	1995	DBLP DOI BibTeX RDF
19	Raffaele Giancarlo	A Generalization of the Suffix Tree to Square Matrices, with Applications.	SIAM J. Comput.	1995	DBLP DOI BibTeX RDF
19	Ramesh Hariharan	Optimal parallel suffix tree construction.	STOC	1994	DBLP DOI BibTeX RDF
19	Süleyman Cenk Sahinalp, Uzi Vishkin	Symmetry breaking for suffix tree construction.	STOC	1994	DBLP DOI BibTeX RDF
19	Wojciech Szpankowski	A Generalized Suffix Tree and its (Un)expected Asymptotic Behaviors.	SIAM J. Comput.	1993	DBLP DOI BibTeX RDF
19	Alberto Apostolico, Costas S. Iliopoulos, Gad M. Landau, Baruch Schieber, Uzi Vishkin	Parallel Construction of a Suffix Tree with Applications.	Algorithmica	1988	DBLP DOI BibTeX RDF
19	Edward M. McCreight	A Space-Economical Suffix Tree Construction Algorithm.	J. ACM	1976	DBLP DOI BibTeX RDF
16	Yu-lung Lo, Ling-yi Tsai	Real-valued feature indexing for music databases.	ICUIMC	2009	DBLP DOI BibTeX RDF	numeric index, string index, content-based retrieval, multimedia database, music database
16	Stanislav Angelov, Boulos Harb, Sampath Kannan, Sanjeev Khanna, Junhyong Kim	Efficient Enumeration of Phylogenetically Informative Substrings.	RECOMB	2006	DBLP DOI BibTeX RDF
14	Jacob Ziv	On Finite Memory Universal Data Compression and Classification of Individual Sequences.	IEEE Trans. Inf. Theory	2008	DBLP DOI BibTeX RDF
14	Cécile Low-Kam, Anne Laurent, Maguelonne Teisseire	Detection of Sequential Outliers Using a Variable Length Markov Model.	ICMLA	2008	DBLP DOI BibTeX RDF
14	Jeffrey Heinz	Learning Left-to-Right and Right-to-Left Iterative Languages.	ICGI	2008	DBLP DOI BibTeX RDF
14	Huanhuan Cao, Daxin Jiang, Jian Pei, Qi He 0002, Zhen Liao, Enhong Chen, Hang Li 0001	Context-aware query suggestion by mining click-through and session data.	KDD	2008	DBLP DOI BibTeX RDF	session data, query suggestion, click-through data
14	Dong Min Seo, Jae Soo Yoo, Ki Hyung Cho	An Efficient XML Index Structure with Bottom-Up Query Processing.	International Conference on Computational Science (3)	2007	DBLP DOI BibTeX RDF	Bottom-Up Query Processing, XML Query, XML Index
14	Alexandra M. Carvalho, Ana T. Freitas, Arlindo L. Oliveira, Marie-France Sagot	Efficient Extraction of Structured Motifs Using Box-Links.	SPIRE	2004	DBLP DOI BibTeX RDF
14	Stanislav Angelov, Boulos Harb, Sampath Kannan, Sanjeev Khanna, Junhyong Kim, Li-San Wang	Genome Identification and Classification by Short Oligo Arrays.	WABI	2004	DBLP DOI BibTeX RDF
14	Alberto Apostolico, Mary Ellen Bock, Stefano Lonardi	Linear Global Detectors of Redundant and Rare Substrings.	Data Compression Conference	1999	DBLP DOI BibTeX RDF
11	Daisuke Ikeda, Einoshin Suzuki	Mining Peculiar Compositions of Frequent Substrings from Sparse Text Data Using Background Texts.	ECML/PKDD (1)	2009	DBLP DOI BibTeX RDF
11	Stella Kopidaki, Panagiotis Papadakos, Yannis Tzitzikas	STC+ and NM-STC: Two Novel Online Results Clustering Methods for Web Searching.	WISE	2009	DBLP DOI BibTeX RDF
11	Kang Deng, Osmar R. Zaïane	Contrasting Sequence Groups by Emerging Sequences.	Discovery Science	2009	DBLP DOI BibTeX RDF	Emerging Sequences, Sequence Similarity, Classification
11	Beihong Jin, Haibin Weng, Yunfeng Wen, Faen Zhang	A Service Discovery System Analyzed with a Queueing Theory Model.	COMPSAC (1)	2009	DBLP DOI BibTeX RDF
11	Gonzalo Navarro 0001	Implementation and Application of Automata in String Processing.	CIAA	2009	DBLP DOI BibTeX RDF
11	Chih-Chieh Hung, Chih-Wen Chang, Wen-Chih Peng	Mining trajectory profiles for discovering user communities.	GIS-LBSN	2009	DBLP DOI BibTeX RDF	community structure and location-based service, trajectory profile
11	Alexy Khrabrov 0001, George Cybenko	A Language of Life: Characterizing People Using Cell Phone Tracks.	CSE (4)	2009	DBLP DOI BibTeX RDF
11	Gonzalo Navarro 0001, Leena Salmela	Indexing Variable Length Substrings for Exact and Approximate Matching.	SPIRE	2009	DBLP DOI BibTeX RDF
11	Wing-Kai Hon, Rahul Shah 0001, Sharma V. Thankachan, Jeffrey Scott Vitter	On Entropy-Compressed Text Indexing in External Memory.	SPIRE	2009	DBLP DOI BibTeX RDF
11	Luís M. S. Russo, Arlindo L. Oliveira	A compressed self-index using a Ziv-Lempel dictionary.	Inf. Retr.	2008	DBLP DOI BibTeX RDF	Compressed index, Data compression, Pattern matching, Text indexing
11	Jiayu Zhou, Youfang Lin, Shi Wang, Cungen Cao	Discover hierarchical lexical hyponymy relation from large-scale concept set.	IEEE ICCI	2008	DBLP DOI BibTeX RDF
11	Sandeep Tata, Jignesh M. Patel	FLAME: Shedding Light on Hidden Frequent Patterns in Sequence Datasets.	ICDE	2008	DBLP DOI BibTeX RDF
11	Antal van den Bosch, Toine Bogers	Efficient context-sensitive word completion for mobile devices.	Mobile HCI	2008	DBLP DOI BibTeX RDF	predictive text processing, mobile devices, scaling, ergonomics, context sensitivity, word completion
11	Yun Zhang, Boqin Feng, Yewei Xue	A New Search Results Clustering Algorithm Based on Formal Concept Analysis.	FSKD (2)	2008	DBLP DOI BibTeX RDF
11	Zhimin Gu, Zhijie Ban, Hongli Zhang 0002, Zhaolei Duan, Xiaojin Ren	Online Granular Prediction Model for Web Prefetching.	RSKT	2008	DBLP DOI BibTeX RDF	Data Mining, Algorithms, Granular Computing
11	Li-Qing Qiu, Bin Pang, Liping Zhao 0004	An Event Detection Algorithm Based on Improved STC.	ICNSC	2008	DBLP DOI BibTeX RDF
11	Hai-Tao Zheng 0002, Charles Borchert, Hong-Gee Kim	A Concept-Driven Automatic Ontology Generation Approach for Conceptualization of Document Corpora.	Web Intelligence	2008	DBLP DOI BibTeX RDF
11	Yun Zhang, Boqin Feng	A Co-occurrence Based Hierarchical Method for Clustering Web Search Results.	Web Intelligence	2008	DBLP DOI BibTeX RDF
11	Agung Sediyono, Ku Ruhana Ku-Mahamud	Algorithm of the longest commonly consecutive word for Plagiarism detection in text based document.	ICDIM	2008	DBLP DOI BibTeX RDF
11	Stefano Lonardi, Wojciech Szpankowski, Mark Daniel Ward	Error Resilient LZ'77 Data Compression: Algorithms, Analysis, and Experiments.	IEEE Trans. Inf. Theory	2007	DBLP DOI BibTeX RDF
11	Fabian Mörchen	Unsupervised pattern mining from symbolic temporal data.	SIGKDD Explor.	2007	DBLP DOI BibTeX RDF
11	Tieming Ji, Desh Ranjan, Jeanne Curry, Mary O'Connell	Computational Identification of Cis-regulatory Elements Associated with Pungency of Chili Peppers.	BIBE	2007	DBLP DOI BibTeX RDF
11	Faraz Rasheed, Mohammed Al-Shalalfa, Reda Alhajj	Adapting Machine Learning Technique for Periodicity Detection in Nucleosomal Locations in Sequences.	IDEAL	2007	DBLP DOI BibTeX RDF
11	Esko Ukkonen	Structural Analysis of Gapped Motifs of a String.	MFCS	2007	DBLP DOI BibTeX RDF
11	Hsiao-Ping Tsai, De-Nian Yang, Wen-Chih Peng, Ming-Syan Chen	Exploring Group Moving Pattern for an Energy-Constrained Object Tracking Sensor Network.	PAKDD	2007	DBLP DOI BibTeX RDF	OTSN, Prediction, Grouping, Data Aggregation
11	Sijung Kim, Geuk Lee, Bonghan Kim	The Design and Testing of Automated Signature Generation Engine for Worms Detection.	KES-AMSTA	2007	DBLP DOI BibTeX RDF
11	Guichong Li, Howard J. Hamilton	Searching for Pattern Rules.	ICDM	2006	DBLP DOI BibTeX RDF
11	Illhoi Yoo, Xiaohua Hu 0001	A comprehensive comparison study of document clustering for a biomedical digital library MEDLINE.	JCDL	2006	DBLP DOI BibTeX RDF	comparison study, ontology, document clustering
11	Illhoi Yoo, Xiaohua Hu 0001	Biomedical Ontology MeSH Improves Document Clustering Qualify on MEDLINE Articles: A Comparison Study.	CBMS	2006	DBLP DOI BibTeX RDF
11	Petr Kolman, Tomasz Walen	Reversal Distance for Strings with Duplicates: Linear Time Approximation Using Hitting Set.	WAOA	2006	DBLP DOI BibTeX RDF
11	Stanislaw Osinski	Improving Quality of Search Results Clustering with Approximate Matrix Factorisations.	ECIR	2006	DBLP DOI BibTeX RDF
11	Stanislaw Osinski, Dawid Weiss	A Concept-Driven Algorithm for Clustering Search Results.	IEEE Intell. Syst.	2005	DBLP DOI BibTeX RDF	clustering, Web search, text analysis
11	Mihail Halachev, Nematollaah Shiri, Anand Thamildurai	Exact match search in sequence data using suffix trees.	CIKM	2005	DBLP DOI BibTeX RDF	indexing, bioinformatics, suffix trees, sequence databases
11	Hasan Ogul, Ü. Erkan Mumcuoglu	Protein Solvent Accessibility Prediction Using Support Vector Machines and Sequence Conservations.	TAINN	2005	DBLP DOI BibTeX RDF
11	Xue Wu 0002, Woei-Jyh Lee, Chau-Wen Tseng	ESTmapper: Efficiently Aligning DNA Sequences to Genomes.	IPDPS	2005	DBLP DOI BibTeX RDF
11	Reede Ren, Joemon M. Jose	Football Video Segmentation Based on Video Production Strategy.	ECIR	2005	DBLP DOI BibTeX RDF
11	Jingyi Yang, Jitender S. Deogun, Zhaohui Sun	A New Scheme for Protein Sequence Motif Extraction.	HICSS	2005	DBLP DOI BibTeX RDF
11	Daniel Dalevi, Devdatt P. Dubhashi	The Peres-Shields Order Estimator for Fixed and Variable Length Markov Models with Applications to DNA Sequence Similarity.	WABI	2005	DBLP DOI BibTeX RDF
11	Daniel Crabtree, Xiaoying Gao, Peter Andreae	Improving Web Clustering by Cluster Selection.	Web Intelligence	2005	DBLP DOI BibTeX RDF	cluster selection, web clustering