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Results
Found 16824 publication records. Showing 16824 according to the selection in the facets
Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
1 | William Haese-Hill, Kathryn Crouch, Thomas D. Otto |
peaks2utr: a robust Python tool for the annotation of 3′ UTRs. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Aurélien Beaude, Milad Rafiee Vahid, Franck Augé, Farida Zehraoui, Blaise Hanczar |
AttOmics: attention-based architecture for diagnosis and prognosis from omics data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Jun Young Park, Jang Jae Lee, Younghwa Lee, Dongsoo Lee, Jungsoo Gim, Lindsay A. Farrer, Kun Ho Lee, Sungho Won |
Machine learning-based quantification for disease uncertainty increases the statistical power of genetic association studies. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | René Staritzbichler, Nikola Ristic, Tülin Stapke, Peter W. Hildebrand |
SmoothT - a server constructing low-energy pathways from conformational ensembles for interactive visualization and enhanced sampling. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Bryce Kille, Erik Garrison, Todd J. Treangen, Adam M. Phillippy |
Minmers are a generalization of minimizers that enable unbiased local Jaccard estimation. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Hikmet Emre Kaya, Kevin J. Naidoo |
CytoCopasi: a chemical systems biology target and drug discovery visual data analytics platform. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Boris Muzellec, Maria Telenczuk, Vincent Cabeli, Mathieu Andreux |
PyDESeq2: a python package for bulk RNA-seq differential expression analysis. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Hannah Schriever, Dennis Kostka |
Vaeda computationally annotates doublets in single-cell RNA sequencing data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Megan L. Smith, Matthew W. Hahn |
Phylogenetic inference using generative adversarial networks. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Lucas F. Voges, Lukas C. Jarren, Stephan Seifert |
Exploitation of surrogate variables in random forests for unbiased analysis of mutual impact and importance of features. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Herve Emissah, Bengt Ljungquist, Giorgio A. Ascoli |
Bibliometric analysis of neuroscience publications quantifies the impact of data sharing. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Daniel Liu, Martin Steinegger |
Block Aligner: an adaptive SIMD-accelerated aligner for sequences and position-specific scoring matrices. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Christiana N. Fogg, Diane E. Kovats, Martin Vingron |
2023 ISCB accomplishments by a senior scientist award: Mark Gerstein. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Andrea Gasparin, Federico Julian Camerota Verdù, Daniele Catanzaro, Lorenzo Castelli |
An evolution strategy approach for the balanced minimum evolution problem. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Yang Hua, Xiaoning Song, Zhen-Hua Feng, Xiaojun Wu 0001 |
MFR-DTA: a multi-functional and robust model for predicting drug-target binding affinity and region. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | José Camacho 0001, Raffaele Vitale, David Morales-Jiménez, Carolina Gómez-Llorente |
Variable-selection ANOVA Simultaneous Component Analysis (VASCA). |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Max Franz, Christian Tannus Lopes, Dylan Fong, Mike Kucera, Manfred Cheung, Metin Can Siper, Gerardo Huck, Yue Dong, Selçuk Onur Sümer, Gary D. Bader |
Cytoscape.js 2023 update: a graph theory library for visualization and analysis. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Jeffrey M. Dick, Xun Kang |
chem16S: community-level chemical metrics for exploring genomic adaptation to environments. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Lixin Cheng, Haonan Wu, Xubin Zheng, Ning Zhang, Pengfei Zhao, Ran Wang, Qiong Wu, Tao Liu, Xiaojun Yang, Qingshan Geng |
GPGPS: a robust prognostic gene pair signature of glioma ensembling IDH mutation and 1p/19q co-deletion. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Amelia Villegas-Morcillo, Louis Robinson, Arthur Flajolet, Thomas D. Barrett |
ManyFold: an efficient and flexible library for training and validating protein folding models. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Carlos Sequeiros, Manuel Pájaro, Carlos Vázquez 0002, Julio R. Banga, Irene Otero-Muras |
IDESS: a toolbox for identification and automated design of stochastic gene circuits. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | John H. Morris, Karthik Soman, Rabia E. Akbas, Xiaoyuan Zhou, Brett Smith, Elaine C. Meng, Conrad C. Huang, Gabriel Cerono, Gundolf Schenk, Angela Rizk-Jackson, Adil Harroud, Lauren M. Sanders, Sylvain V. Costes, Krish Bharat, Arjun Chakraborty, Alexander R. Pico, Taline Mardirossian, Michael J. Keiser, Alice Tang, Josef Hardi, Yongmei Shi, Mark A. Musen, Sharat Israni, Sui Huang, Peter W. Rose, Charlotte A. Nelson, Sergio E. Baranzini |
The scalable precision medicine open knowledge engine (SPOKE): a massive knowledge graph of biomedical information. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Florin C. Walter, Oliver Stegle, Britta Velten |
FISHFactor: a probabilistic factor model for spatial transcriptomics data with subcellular resolution. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Jun Wen, Xiang Zhang 0012, Everett Neil Rush, Vidul Ayakulangara Panickan, Xingyu Li, Tianrun Cai, Doudou Zhou, Yuk-Lam Ho, Lauren Costa, Edmon Begoli, Chuan Hong, J. Michael Gaziano, Kelly Cho, Junwei Lu, Katherine P. Liao, Marinka Zitnik, Tianxi Cai |
Multimodal representation learning for predicting molecule-disease relations. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Daniel Krefl, Alessandro Brandulas Cammarata, Sven Bergmann |
PascalX: a Python library for GWAS gene and pathway enrichment tests. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Julian Dosch, Holger Bergmann, Vinh Tran, Ingo Ebersberger |
FAS: assessing the similarity between proteins using multi-layered feature architectures. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Mohamed Reda El Khili, Safyan Aman Memon, Amin Emad |
MARSY: a multitask deep-learning framework for prediction of drug combination synergy scores. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Hyeongseon Jeon, Kyu-Sang Lim, Yet Nguyen, Dan Nettleton |
Adjusting for gene-specific covariates to improve RNA-seq analysis. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Xiao Wang, Wei-Cheng Gu, Jie Li, Bin-Guang Ma |
EVRC: reconstruction of chromosome 3D structure models using error-vector resultant algorithm with clustering coefficient. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Wouter De Coster, Rosa Rademakers |
NanoPack2: population-scale evaluation of long-read sequencing data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Xiaoqing Ru, Quan Zou 0001, Chen Lin |
Optimization of drug-target affinity prediction methods through feature processing schemes. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Christiana N. Fogg, Diane E. Kovats, Martin Vingron |
2023 ISCB Overton Prize: Jingyi Jessica Li. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Xu Han, Wanli Wang, Li-Hua Ma, Ismael Ai-Ramahi, Juan Botas, Kevin Mackenzie, Genevera I. Allen, Damian W. Young, Zhandong Liu, Mirjana Maletic-Savatic |
SPA-STOCSY: an automated tool for identifying annotated and non-annotated metabolites in high-throughput NMR spectra. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Correction to: Integrative analysis of individual-level data and high-dimensional summary statistics. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Bhanwar Lal Puniya, Andreas Dräger |
Advancements in computational modelling of biological systems: seventh annual SysMod meeting. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Aakriti Jain, Neelja Singhal, Manish Kumar 0005 |
AFRbase: a database of protein mutations responsible for antifungal resistance. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Kleanthi Lakiotaki, Zacharias Papadovasilakis, Vincenzo Lagani, Stefanos Fafalios, Paulos Charonyktakis, Michail Tsagris, Ioannis Tsamardinos |
Automated machine learning for genome wide association studies. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Huaying Fang |
gmcoda: Graphical model for multiple compositional vectors in microbiome studies. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Viktoria Schuster, Anders Krogh |
The Deep Generative Decoder: MAP estimation of representations improves modelling of single-cell RNA data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Wanying Zhu, Hung-Hsin Chen, Alexander S. Petty, Lauren E. Petty, Hannah G. Polikowsky, Eric R. Gamazon, Jennifer E. Below, Heather M. Highland |
IMMerge: merging imputation data at scale. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Marcos Díaz-Gay, Raviteja Vangara, Mark Barnes, Xi Wang, S. M. Ashiqul Islam, Ian Vermes, Stephen Duke, Nithish Bharadhwaj Narasimman, Ting Yang, Zichen Jiang, Sarah J. Moody, Sergey Senkin, Paul Brennan, Michael R. Stratton, Ludmil B. Alexandrov |
Assigning mutational signatures to individual samples and individual somatic mutations with SigProfilerAssignment. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Jared G. Galloway, Kevin Sung, Samuel Schwartz Minot, Meghan E. Garrett, Caitlin I Stoddard, Alexandra C. Willcox, Zak A. Yaffe, Ryan Yucha, Julie Overbaugh, Frederick A. Matsen IV |
phippery: a software suite for PhIP-Seq data analysis. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Tanja Holstein, Franziska Kistner, Lennart Martens, Thilo Muth |
PepGM: a probabilistic graphical model for taxonomic inference of viral proteome samples with associated confidence scores. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Abbi Abdel-Rehim, Oghenejokpeme I. Orhobor, Hang Lou, Hao Ni, Ross D. King |
Protein-ligand binding affinity prediction exploiting sequence constituent homology. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Expression of Concern: Overcoming the inadaptability of sparse group lasso for data with various group structures by stacking. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Serena Rosignoli, Luisa di Paola, Alessandro Paiardini |
PyPCN: protein contact networks in PyMOL. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Minsoo Kim, Daniel D. Vo, Michi E. Kumagai, Connor T. Jops, Michael J. Gandal |
GeneticsMakie.jl: a versatile and scalable toolkit for visualizing locus-level genetic and genomic data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Mercedeh Movassagh, Steven J. Schiff, Joseph N. Paulson |
mbQTL: an R/Bioconductor package for microbial quantitative trait loci (QTL) estimation. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Ngoc-Quang Nguyen, Gwanghoon Jang, Hajung Kim, Jaewoo Kang |
Perceiver CPI: a nested cross-attention network for compound-protein interaction prediction. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Mercè Alemany-Chavarria, Jaime Rodríguez-Guerra, Jean-Didier Maréchal |
TALAIA: a 3D visual dictionary for protein structures. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Aman Agarwal, Fengdi Zhao, Yuchao Jiang, Li Chen |
TIVAN-indel: a computational framework for annotating and predicting non-coding regulatory small insertions and deletions. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Thaidy Moreno, Joaquin Magana, David A. Quigley |
AARDVARK: an automated reversion detector for variants affecting resistance kinetics. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Thomas Naake, Johannes Rainer, Wolfgang Huber |
MsQuality: an interoperable open-source package for the calculation of standardized quality metrics of mass spectrometry data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Adam Platt, E. Josiah Lutton, Edward Offord, Till Bretschneider |
MiCellAnnGELo: annotate microscopy time series of complex cell surfaces with 3D virtual reality. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Correction to: Phylovar: toward scalable phylogeny-aware inference of single-nucleotide variations from single-cell DNA sequencing data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Eric H. Au, Christiana Fauci, Yanting Luo, Riley J. Mangan, Daniel A Snellings, Chelsea R. Shoben, Seth Weaver, Shae K. Simpson, Craig B. Lowe |
Gonomics: uniting high performance and readability for genomics with Go. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Pierre-Aurélien Gilliot, Thomas E. Gorochowski |
Effective design and inference for cell sorting and sequencing based massively parallel reporter assays. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Zahed Khatooni, Navid Teymourian, Heather L. Wilson |
Using a novel structure/function approach to select diverse swine major histocompatibility complex 1 alleles to predict epitopes for vaccine development. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Correction to: Reducing cost in DNA-based data storage by sequence analysis-aided soft information decoding of variable-length reads. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Stefan Badelt, Ronny Lorenz, Ivo L. Hofacker |
DrTransformer: heuristic cotranscriptional RNA folding using the nearest neighbor energy model. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Ke Zhang, Min Wu 0008, Yong Liu 0020, Yimiao Feng, Jie Zheng 0002 |
KR4SL: knowledge graph reasoning for explainable prediction of synthetic lethality. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Yuzhong Deng, Jianxiong Tang, Jiyang Zhang, Jianxiao Zou, Que Zhu, Shicai Fan |
GraphCpG: imputation of single-cell methylomes based on locus-aware neighboring subgraphs. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Joshua A. M. Kaste, Yair Shachar-Hill |
Accurate flux predictions using tissue-specific gene expression in plant metabolic modeling. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Trisevgeni Rapakoulia, Sara Lopez Ruiz De Vargas, Persia Akbari Omgba, Verena Laupert, Igor Ulitsky, Martin Vingron |
CENTRE: a gradient boosting algorithm for Cell-type-specific ENhancer-Target pREdiction. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Evangelos Karatzas, Fotis A. Baltoumas, Eleni Aplakidou, Panagiota I. Kontou, Panos Stathopoulos, Leonidas Stefanis, Pantelis G. Bagos, Georgios A. Pavlopoulos |
Flame (v2.0): advanced integration and interpretation of functional enrichment results from multiple sources. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Correction to: SBbadger: biochemical reaction networks with definable degree distributions. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Kiran Javkar, Hugh Rand, Errol Strain, Mihai Pop |
PRAWNS: compact pan-genomic features for whole-genome population genomics. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Correction to: Biomedical evidence engineering for data-driven discovery. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Lin Wang, Chenhao Sun, Xianyu Xu, Jia Li, Wenjuan Zhang |
A neighborhood-regularization method leveraging multiview data for predicting the frequency of drug-side effects. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Apurva Kalia, Dilip Krishnan, Soha Hassoun |
CSI: Contrastive data Stratification for Interaction prediction and its application to compound-protein interaction prediction. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Seyed Amir Malekpour, Maryam Shahdoust, Rosa Aghdam, Mehdi Sadeghi |
wpLogicNet: logic gate and structure inference in gene regulatory networks. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Nathan P. Williams, Carlos H. M. Rodrigues, Jia Truong, David B. Ascher, Jessica K. Holien |
DockNet: high-throughput protein-protein interface contact prediction. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Ruoyu Tang, Xinyu He, Ruiqi Wang |
Constructing maps between distinct cell fates and parametric conditions by systematic perturbations. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Jonathan Klonowski, Qianqian Liang, Zeynep H. Coban Akdemir, Cecilia Lo, Dennis Kostka |
aenmd: annotating escape from nonsense-mediated decay for transcripts with protein-truncating variants. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Manon Réau, Nicolas Renaud, Li C. Xue, Alexandre M. J. J. Bonvin |
DeepRank-GNN: a graph neural network framework to learn patterns in protein-protein interfaces. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Correction to: Clustering spatial transcriptomics data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Yeonil Kim, Yueh-Yun Chi, Judong Shen, Fei Zou |
Robust genetic model-based SNP-set association test using CauchyGM. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Gianluca Vozza, Emanuele Bonetti, Giulia Tini, Valentina Favalli, Gianmaria Frige, Gabriele Bucci, Simona De Summa, Mario Zanfardino, Francesco Zapelloni, Luca Mazzarella |
Benchmarking and improving the performance of variant-calling pipelines with RecallME. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Richard Wilton, Alexander S. Szalay |
Short-read aligner performance in germline variant identification. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Qiao Jin 0001, Won Kim 0003, Qingyu Chen 0001, Donald C. Comeau, Lana Yeganova, W. John Wilbur, Zhiyong Lu |
MedCPT: Contrastive Pre-trained Transformers with large-scale PubMed search logs for zero-shot biomedical information retrieval. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Correction to: HunFlair: an easy-to-use tool for state-of-the-art biomedical named entity recognition. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | My-Diem Nguyen Pham, Thanh-Nhan Nguyen, Le Son Tran, Que-Tran Bui Nguyen, Thien-Phuc Hoang Nguyen, Thi Mong Quynh Pham, Hoai-Nghia Nguyen, Hoa Giang, Minh-Duy Phan, Vy Nguyen |
epiTCR: a highly sensitive predictor for TCR-peptide binding. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Hyun Jae Cho, Mia Shu, Stefan Bekiranov, Chongzhi Zang, Aidong Zhang |
Interpretable meta-learning of multi-omics data for survival analysis and pathway enrichment. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Wei Chen 0088, Cheng Zhong, Jiajie Peng, Zhongyu Wei |
DxFormer: a decoupled automatic diagnostic system based on decoder-encoder transformer with dense symptom representations. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Cyprien Plateau-Holleville, Simon Guionnière, Benjamin Boyer, Brian Jiménez-García, Guillaume Levieux, Stéphane Mérillou, Maxime Maria, Matthieu Montès |
UDock2: interactive real-time multi-body protein-protein docking software. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Boyan Zhou, Huilin Li |
STEMSIM: a simulator of within-strain short-term evolutionary mutations for longitudinal metagenomic data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Michal Wlasnowolski, Pawel Z. Grabowski, Damian Roszczyk, Krzysztof Kaczmarski, Dariusz Plewczynski |
cudaMMC: GPU-enhanced multiscale Monte Carlo chromatin 3D modelling. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Thomas Cokelaer, Sarah Cohen-Boulakia, Frédéric Lemoine 0002 |
Reprohackathons: promoting reproducibility in bioinformatics through training. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Heng Li, Mijuan Shi, Keyi Ren, Lei Zhang, Weidong Ye, Wanting Zhang, Yingyin Cheng, Xiaoqin Xia |
Visual Omics: a web-based platform for omics data analysis and visualization with rich graph-tuning capabilities. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Yang Li 0130, Zihou Guo, Xin Gao 0001, Guohua Wang |
MMCL-CDR: enhancing cancer drug response prediction with multi-omics and morphology images contrastive representation learning. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Javier D. Gomez, Martha L. Wall, Mohsin Rahim, Shrikaar Kambhampati, Bradley S. Evans, Doug K. Allen, Maciek R. Antoniewicz, Jamey D. Young |
Program for Integration and Rapid Analysis of Mass Isotopomer Distributions (PIRAMID). |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Lena Buck, Tobias Schmidt, Maren Feist, Philipp Schwarzfischer, Dieter Kube, Peter J. Oefner, Helena U. Zacharias, Michael Altenbuchinger, Katja Dettmer, Wolfram Gronwald, Rainer Spang |
Anomaly detection in mixed high-dimensional molecular data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Yuhang Liu, Hao Yuan, Qiang Zhang, Zixuan Wang, Shuwen Xiong, Naifeng Wen, Yongqing Zhang |
Multiple sequence alignment based on deep reinforcement learning with self-attention and positional encoding. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Jiayu Shang, Cheng Peng, Xubo Tang, Yanni Sun |
PhaVIP: Phage VIrion Protein classification based on chaos game representation and Vision Transformer. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Marija Stanojevic, Jovan Andjelkovic, Adrienne Kasprowicz, Louise A. Huuki, Jennifer Chao, S. Blair Hedges, Sudhir Kumar 0001, Zoran Obradovic |
Discovering research articles containing evolutionary timetrees by machine learning. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | |
Correction to: Targeted metabolomics analyses for brain tumor margin assessment during surgery. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Adam Streck, Tom L. Kaufmann, Roland F. Schwarz |
SMITH: spatially constrained stochastic model for simulation of intra-tumour heterogeneity. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Neng Huang, Minghua Xu 0005, Fan Nie, Peng Ni, Chuan-Le Xiao, Feng Luo, Jianxin Wang 0001 |
NanoSNP: a progressive and haplotype-aware SNP caller on low-coverage nanopore sequencing data. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Sanjay Kumar Srikakulam, Sebastian Keller, Fawaz Dabbaghie, Robert Bals, Olga V. Kalinina |
MetaProFi: an ultrafast chunked Bloom filter for storing and querying protein and nucleotide sequence data for accurate identification of functionally relevant genetic variants. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
|
1 | Jun Ma, Manuel Cáceres, Leena Salmela, Veli Mäkinen, Alexandru I. Tomescu |
Chaining for accurate alignment of erroneous long reads to acyclic variation graphs. |
Bioinform. |
2023 |
DBLP DOI BibTeX RDF |
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