Search results for "DNA"

Hits ?▲	Authors	Title	Venue	Year	Link
34	Irina Kostitsyna, Cai Wood, Damien Woods	Turning Machines.	DNA	2020	DBLP DOI BibTeX RDF
34	Hooman Hashemi, Ben Chugg, Anne Condon	Composable Computation in Leaderless, Discrete Chemical Reaction Networks.	DNA	2020	DBLP DOI BibTeX RDF
34	Titus H. Klinge, James I. Lathrop, Sonia Moreno, Hugh D. Potter, Narun K. Raman, Matthew R. Riley	ALCH: An Imperative Language for Chemical Reaction Network-Controlled Tile Assembly.	DNA	2020	DBLP DOI BibTeX RDF
34	Antti Lankinen, Ismael Mullor Ruiz, Thomas E. Ouldridge	Implementing Non-Equilibrium Networks with Active Circuits of Duplex Catalysts.	DNA	2020	DBLP DOI BibTeX RDF
34	Chris Thachuk, Yan Liu 0037 (eds.)	DNA Computing and Molecular Programming - 25th International Conference, DNA 25, Seattle, WA, USA, August 5-9, 2019, Proceedings	DNA	2019	DBLP DOI BibTeX RDF
34	John Calvin Alumbaugh, Joshua J. Daymude, Erik D. Demaine, Matthew J. Patitz, Andréa W. Richa	Simulation of Programmable Matter Systems Using Active Tile-Based Self-Assembly.	DNA	2019	DBLP DOI BibTeX RDF
34	Pierre-Étienne Meunier, Damien Regnault	Non-cooperatively Assembling Large Structures.	DNA	2019	DBLP DOI BibTeX RDF
34	David Furcy, Scott M. Summers, Christian Wendlandt	New Bounds on the Tile Complexity of Thin Rectangles at Temperature-1.	DNA	2019	DBLP DOI BibTeX RDF
34	Xiang Huang 0001, Titus H. Klinge, James I. Lathrop	Real-Time Equivalence of Chemical Reaction Networks and Analog Computers.	DNA	2019	DBLP DOI BibTeX RDF
34	Allison Tai, Anne Condon	Error-Free Stable Computation with Polymer-Supplemented Chemical Reaction Networks.	DNA	2019	DBLP DOI BibTeX RDF
34	Shalin Shah, Tianqi Song, Xin Song, Ming Yang, John H. Reif	Implementing Arbitrary CRNs Using Strand Displacing Polymerase.	DNA	2019	DBLP DOI BibTeX RDF
34	Abhinav Singh, Carsten Wiuf, Abhishek Behera, Manoj Gopalkrishnan	A Reaction Network Scheme Which Implements Inference and Learning for Hidden Markov Models.	DNA	2019	DBLP DOI BibTeX RDF
34	Tatiana Brailovskaya, Gokul Gowri, Sean Yu, Erik Winfree	Reversible Computation Using Swap Reactions on a Surface.	DNA	2019	DBLP DOI BibTeX RDF
34	Erik Winfree	Chemical Reaction Networks and Stochastic Local Search.	DNA	2019	DBLP DOI BibTeX RDF
34	Gokul Gowri, Randolph Lopez, Georg Seelig	Combined Amplification and Molecular Classification for Gene Expression Diagnostics.	DNA	2019	DBLP DOI BibTeX RDF
34	David Doty, Hendrik Dietz (eds.)	DNA Computing and Molecular Programming - 24th International Conference, DNA 24, Jinan, China, October 8-12, 2018, Proceedings	DNA	2018	DBLP DOI BibTeX RDF
34	Jérôme Durand-Lose, Jacob Hendricks, Matthew J. Patitz, Ian Perkins, Michael Sharp	Self-assembly of 3-D Structures Using 2-D Folding Tiles.	DNA	2018	DBLP DOI BibTeX RDF
34	Yo-Sub Han, Hwee Kim, Shinnosuke Seki	Transcript Design Problem of Oritatami Systems.	DNA	2018	DBLP DOI BibTeX RDF
34	Robert Gmyr, Kristian Hinnenthal, Irina Kostitsyna, Fabian Kuhn, Dorian Rudolph, Christian Scheideler, Thim Strothmann	Forming Tile Shapes with Simple Robots.	DNA	2018	DBLP DOI BibTeX RDF
34	Marko Vasic, David Soloveichik, Sarfraz Khurshid	: Molecular Programming Language.	DNA	2018	DBLP DOI BibTeX RDF
34	Yo-Sub Han, Hwee Kim	Construction of Geometric Structure by Oritatami System.	DNA	2018	DBLP DOI BibTeX RDF
34	Muppirala Viswa Virinchi, Abhishek Behera, Manoj Gopalkrishnan	A Reaction Network Scheme Which Implements the EM Algorithm.	DNA	2018	DBLP DOI BibTeX RDF
34	Jacob Hendricks, Joseph Opseth, Matthew J. Patitz, Scott M. Summers	Hierarchical Growth Is Necessary and (Sometimes) Sufficient to Self-assemble Discrete Self-similar Fractals.	DNA	2018	DBLP DOI BibTeX RDF
34	Cameron T. Chalk, Austin Luchsinger, Eric Martinez, Robert T. Schweller, Andrew Winslow, Tim Wylie	Freezing Simulates Non-freezing Tile Automata.	DNA	2018	DBLP DOI BibTeX RDF
34	Erik D. Demaine, Jacob Hendricks, Meagan Olsen, Matthew J. Patitz, Trent A. Rogers, Nicolas Schabanel, Shinnosuke Seki, Hadley Thomas	Know When to Fold 'Em: Self-assembly of Shapes by Folding in Oritatami.	DNA	2018	DBLP DOI BibTeX RDF
34	Robert Brijder, Lulu Qian (eds.)	DNA Computing and Molecular Programming - 23rd International Conference, DNA 23, Austin, TX, USA, September 24-28, 2017, Proceedings	DNA	2017	DBLP DOI BibTeX RDF
34	Yo-Sub Han, Hwee Kim	Ruleset Optimization on Isomorphic Oritatami Systems.	DNA	2017	DBLP DOI BibTeX RDF
34	Robert T. Schweller, Andrew Winslow, Tim Wylie	Complexities for High-Temperature Two-Handed Tile Self-assembly.	DNA	2017	DBLP DOI BibTeX RDF
34	Dan Alistarh, Bartlomiej Dudek 0001, Adrian Kosowski, David Soloveichik, Przemyslaw Uznanski	Robust Detection in Leak-Prone Population Protocols.	DNA	2017	DBLP DOI BibTeX RDF
34	Marta Andrés Arroyo, Sarah Cannon, Joshua J. Daymude, Dana Randall, Andréa W. Richa	A Stochastic Approach to Shortcut Bridging in Programmable Matter.	DNA	2017	DBLP DOI BibTeX RDF
34	Yen-Ru Chin, Jui-Ting Tsai, Ho-Lin Chen	A Minimal Requirement for Self-assembly of Lines in Polylogarithmic Time.	DNA	2017	DBLP DOI BibTeX RDF
34	Stefan Badelt, Seung Woo Shin, Robert F. Johnson, Qing Dong, Chris Thachuk, Erik Winfree	A General-Purpose CRN-to-DSD Compiler with Formal Verification, Optimization, and Simulation Capabilities.	DNA	2017	DBLP DOI BibTeX RDF
34	William Poole, Andrés Ortiz-Muñoz, Abhishek Behera, Nick S. Jones, Thomas E. Ouldridge, Erik Winfree, Manoj Gopalkrishnan	Chemical Boltzmann Machines.	DNA	2017	DBLP DOI BibTeX RDF
34	Abdulmelik Mohammed, Mustafa Hajij	Unknotted Strand Routings of Triangulated Meshes.	DNA	2017	DBLP DOI BibTeX RDF
34	David Doty, Trent A. Rogers, David Soloveichik, Chris Thachuk, Damien Woods	Thermodynamic Binding Networks.	DNA	2017	DBLP DOI BibTeX RDF
34	Anne Condon, Monir Hajiaghayi, David G. Kirkpatrick, Ján Manuch	Simplifying Analyses of Chemical Reaction Networks for Approximate Majority.	DNA	2017	DBLP DOI BibTeX RDF
34	Muppirala Viswa Virinchi, Abhishek Behera, Manoj Gopalkrishnan	A Stochastic Molecular Scheme for an Artificial Cell to Infer Its Environment from Partial Observations.	DNA	2017	DBLP DOI BibTeX RDF
34	Boya Wang, Chris Thachuk, Andrew D. Ellington, David Soloveichik	The Design Space of Strand Displacement Cascades with Toehold-Size Clamps.	DNA	2017	DBLP DOI BibTeX RDF
34	Yannick Rondelez, Damien Woods (eds.)	DNA Computing and Molecular Programming - 22nd International Conference, DNA 22, Munich, Germany, September 4-8, 2016, Proceedings	DNA	2016	DBLP DOI BibTeX RDF
34	Luca Cardelli, Marta Kwiatkowska, Max Whitby	Chemical Reaction Network Designs for Asynchronous Logic Circuits.	DNA	2016	DBLP DOI BibTeX RDF
34	Robert Brijder, David Doty, David Soloveichik	Robustness of Expressivity in Chemical Reaction Networks.	DNA	2016	DBLP DOI BibTeX RDF
34	Luca Cardelli, Marta Kwiatkowska, Luca Laurenti	Programming Discrete Distributions with Chemical Reaction Networks.	DNA	2016	DBLP DOI BibTeX RDF
34	Robert F. Johnson, Qing Dong, Erik Winfree	Verifying Chemical Reaction Network Implementations: A Bisimulation Approach.	DNA	2016	DBLP DOI BibTeX RDF
34	Manoj Gopalkrishnan	A Scheme for Molecular Computation of Maximum Likelihood Estimators for Log-Linear Models.	DNA	2016	DBLP DOI BibTeX RDF
34	Yo-Sub Han, Hwee Kim, Makoto Ota, Shinnosuke Seki	Nondeterministic Seedless Oritatami Systems and Hardness of Testing Their Equivalence.	DNA	2016	DBLP DOI BibTeX RDF
34	Jacob Hendricks, Meagan Olsen, Matthew J. Patitz, Trent A. Rogers, Hadley Thomas	Hierarchical Self-Assembly of Fractals with Signal-Passing Tiles - (Extended Abstract).	DNA	2016	DBLP DOI BibTeX RDF
34	Zahra Derakhshandeh, Robert Gmyr, Alexandra M. Porter, Andréa W. Richa, Christian Scheideler, Thim Strothmann	On the Runtime of Universal Coating for Programmable Matter.	DNA	2016	DBLP DOI BibTeX RDF
34	Matthew J. Patitz, Trent A. Rogers, Robert T. Schweller, Scott M. Summers, Andrew Winslow	Resiliency to Multiple Nucleation in Temperature-1 Self-Assembly.	DNA	2016	DBLP DOI BibTeX RDF
34	Nicholas Schiefer, Erik Winfree	Time Complexity of Computation and Construction in the Chemical Reaction Network-Controlled Tile Assembly Model.	DNA	2016	DBLP DOI BibTeX RDF
34	Andrew Phillips, Peng Yin (eds.)	DNA Computing and Molecular Programming - 21st International Conference, DNA 21, Boston and Cambridge, MA, USA, August 17-21, 2015. Proceedings	DNA	2015	DBLP DOI BibTeX RDF
34	Robert Brijder	Dominance and T-Invariants for Petri Nets and Chemical Reaction Networks.	DNA	2015	DBLP DOI BibTeX RDF
34	Joseph Malcolm Schaeffer, Chris Thachuk, Erik Winfree	Stochastic Simulation of the Kinetics of Multiple Interacting Nucleic Acid Strands.	DNA	2015	DBLP DOI BibTeX RDF
34	Leigh-Anne Mathieson, Anne Condon	On Low Energy Barrier Folding Pathways for Nucleic Acid Sequences.	DNA	2015	DBLP DOI BibTeX RDF
34	David Furcy, Samuel Micka, Scott M. Summers	Optimal Program-Size Complexity for Self-Assembly at Temperature 1 in 3D.	DNA	2015	DBLP DOI BibTeX RDF
34	Cameron T. Chalk, Bin Fu, Alejandro Huerta, Mario A. Maldonado, Eric Martinez, Robert T. Schweller, Tim Wylie	Flipping Tiles: Concentration Independent Coin Flips in Tile Self-Assembly.	DNA	2015	DBLP DOI BibTeX RDF
34	Nicholas Schiefer, Erik Winfree	Universal Computation and Optimal Construction in the Chemical Reaction Network-Controlled Tile Assembly Model.	DNA	2015	DBLP DOI BibTeX RDF
34	Neil Dalchau, Niall Murphy, Rasmus L. Petersen, Boyan Yordanov	Synthesizing and Tuning Chemical Reaction Networks with Specified Behaviours.	DNA	2015	DBLP DOI BibTeX RDF
34	Erik D. Demaine, Sándor P. Fekete, Christian Scheffer, Arne Schmidt 0001	New Geometric Algorithms for Fully Connected Staged Self-Assembly.	DNA	2015	DBLP DOI BibTeX RDF
34	Zahra Derakhshandeh, Robert Gmyr, Thim Strothmann, Rida A. Bazzi, Andréa W. Richa, Christian Scheideler	Leader Election and Shape Formation with Self-organizing Programmable Matter.	DNA	2015	DBLP DOI BibTeX RDF
34	Jacob Hendricks, Matthew J. Patitz, Trent A. Rogers	Reflections on Tiles (in Self-Assembly).	DNA	2015	DBLP DOI BibTeX RDF
34	Satoshi Murata, Satoshi Kobayashi (eds.)	DNA Computing and Molecular Programming - 20th International Conference, DNA 20, Kyoto, Japan, September 22-26, 2014. Proceedings	DNA	2014	DBLP DOI BibTeX RDF
34	Cody W. Geary, Ebbe Sloth Andersen	Design Principles for Single-Stranded RNA Origami Structures.	DNA	2014	DBLP DOI BibTeX RDF
34	Dominic Scalise, Rebecca Schulman	Emulating Cellular Automata in Chemical Reaction-Diffusion Networks.	DNA	2014	DBLP DOI BibTeX RDF
34	Rachel Cummings, David Doty, David Soloveichik	Probability 1 Computation with Chemical Reaction Networks.	DNA	2014	DBLP DOI BibTeX RDF
34	Robert Brijder	Output Stability and Semilinear Sets in Chemical Reaction Networks and Deciders.	DNA	2014	DBLP DOI BibTeX RDF
34	Ho-Lin Chen, David Doty, Dhiraj Holden, Chris Thachuk, Damien Woods, Chun-Tao Yang	Fast Algorithmic Self-assembly of Simple Shapes Using Random Agitation.	DNA	2014	DBLP DOI BibTeX RDF
34	Fumiya Okubo, Takashi Yokomori	The Computational Capability of Chemical Reaction Automata.	DNA	2014	DBLP DOI BibTeX RDF
34	Oscar H. Ibarra	On Decidability and Closure Properties of Language Classes with Respect to Bio-operations.	DNA	2014	DBLP DOI BibTeX RDF
34	David Soloveichik, Bernard Yurke (eds.)	DNA Computing and Molecular Programming - 19th International Conference, DNA 19, Tempe, AZ, USA, September 22-27, 2013. Proceedings	DNA	2013	DBLP DOI BibTeX RDF
34	Andrew Winslow	Staged Self-assembly and Polyomino Context-Free Grammars.	DNA	2013	DBLP DOI BibTeX RDF
34	David Doty, Monir Hajiaghayi	Leaderless Deterministic Chemical Reaction Networks.	DNA	2013	DBLP DOI BibTeX RDF
34	Moya Chen, Doris Xin, Damien Woods	Parallel Computation Using Active Self-assembly.	DNA	2013	DBLP DOI BibTeX RDF
34	Alexandra Keenan, Robert T. Schweller, Xingsi Zhong	Exponential Replication of Patterns in the Signal Tile Assembly Model.	DNA	2013	DBLP DOI BibTeX RDF
34	Lila Kari, Steffen Kopecki, Shinnosuke Seki	3-Color Bounded Patterned Self-assembly - (Extended Abstract).	DNA	2013	DBLP DOI BibTeX RDF
34	Dandan Mo, Darko Stefanovic	Iterative Self-assembly with Dynamic Strength Transformation and Temperature Control.	DNA	2013	DBLP DOI BibTeX RDF
34	Jacob Hendricks, Jennifer E. Padilla, Matthew J. Patitz, Trent A. Rogers	Signal Transmission across Tile Assemblies: 3D Static Tiles Simulate Active Self-assembly by 2D Signal-Passing Tiles.	DNA	2013	DBLP DOI BibTeX RDF
34	Darko Stefanovic, Andrew J. Turberfield (eds.)	DNA Computing and Molecular Programming - 18th International Conference, DNA 18, Aarhus, Denmark, August 14-17, 2012. Proceedings	DNA	2012	DBLP DOI BibTeX RDF
34	Robert Brijder, Joris J. M. Gillis, Jan Van den Bussche	A Type System for DNAQL.	DNA	2012	DBLP DOI BibTeX RDF
34	Ho-Lin Chen, David Doty, David Soloveichik	Deterministic Function Computation with Chemical Reaction Networks.	DNA	2012	DBLP DOI BibTeX RDF
34	Anne Condon, Bonnie Kirkpatrick, Ján Manuch	Reachability Bounds for Chemical Reaction Networks and Strand Displacement Systems.	DNA	2012	DBLP DOI BibTeX RDF
34	Bahar Behsaz, Ján Manuch, Ladislav Stacho	Turing Universality of Step-Wise and Stage Assembly at Temperature 1.	DNA	2012	DBLP DOI BibTeX RDF
34	Lila Kari, Steffen Kopecki	Deciding Whether a Regular Language Is Generated by a Splicing System.	DNA	2012	DBLP DOI BibTeX RDF
34	Luca Cardelli, William M. Shih (eds.)	DNA Computing and Molecular Programming - 17th International Conference, DNA 17, Pasadena, CA, USA, September 19-23, 2011. Proceedings	DNA	2011	DBLP DOI BibTeX RDF
34	Yasubumi Sakakibara, Yongli Mi (eds.)	DNA Computing and Molecular Programming - 16th International Conference, DNA 16, Hong Kong, China, June 14-17, 2010, Revised Selected Papers	DNA	2011	DBLP DOI BibTeX RDF
34	Vincent Danos, Heinz Koeppl, John Roger Wilson-Kanamori	Cooperative Assembly Systems.	DNA	2011	DBLP DOI BibTeX RDF
34	Matthew R. Lakin, Andrew Phillips	Modelling, Simulating and Verifying Turing-Powerful Strand Displacement Systems.	DNA	2011	DBLP DOI BibTeX RDF
34	Matthew J. Patitz, Robert T. Schweller, Scott M. Summers	Exact Shapes and Turing Universality at Temperature 1 with a Single Negative Glue.	DNA	2011	DBLP DOI BibTeX RDF
34	Nilesh Vaidya, Jessica Mellor, Niles Lehman	Cooperation in an All-RNA Network.	DNA	2011	DBLP DOI BibTeX RDF
34	Erik D. Demaine, Sarah Eisenstat, Mashhood Ishaque, Andrew Winslow	One-Dimensional Staged Self-assembly.	DNA	2011	DBLP DOI BibTeX RDF
34	Anne Condon, Alan J. Hu, Ján Manuch, Chris Thachuk	Less Haste, Less Waste: On Recycling and Its Limits in Strand Displacement Systems.	DNA	2011	DBLP DOI BibTeX RDF
34	Jack H. Lutz	The Computer Science of Molecular Programming.	DNA	2011	DBLP DOI BibTeX RDF
34	Mark J. Olah, Darko Stefanovic	Multivalent Random Walkers - A Model for Deoxyribozyme Walkers.	DNA	2011	DBLP DOI BibTeX RDF
34	Oleg Semenov, Mark J. Olah, Darko Stefanovic	Multiple Molecular Spiders with a Single Localized Source - The One-Dimensional Case - (Extended Abstract).	DNA	2011	DBLP DOI BibTeX RDF
34	Harish Chandran, Nikhil Gopalkrishnan, Andrew Phillips, John H. Reif	Localized Hybridization Circuits.	DNA	2011	DBLP DOI BibTeX RDF
34	Yuriy Brun	Improving Efficiency of 3-SAT-Solving Tile Systems.	DNA	2010	DBLP DOI BibTeX RDF
34	Rebecca Schulman, Erik Winfree	Simple Evolution of Complex Crystal Species.	DNA	2010	DBLP DOI BibTeX RDF
34	Xingguo Liang, Toshio Mochizuki, Taiga Fujii, Hiromu Kashida, Hiroyuki Asanuma	Design of a Functional Nanomaterial with Recognition Ability for Constructing Light-Driven Nanodevices.	DNA	2010	DBLP DOI BibTeX RDF
34	Max H. Garzon, Tit-Yee Wong	Search and Validation of Short Genome-Wide Biomarkers for Bacterial Biological Phylogenies.	DNA	2010	DBLP DOI BibTeX RDF
34	Lila Kari, Shinnosuke Seki, Zhi Xu 0003	Triangular Tile Self-assembly Systems.	DNA	2010	DBLP DOI BibTeX RDF
34	Vamsi Kundeti, Sanguthevar Rajasekaran	Randomized Self Assembly of Rectangular Nano Structures.	DNA	2010	DBLP DOI BibTeX RDF