Search results for "Peptides"

Hits ?▲	Authors	Title	Venue	Year	Link
15	Jin-Hong Shi, Bolin Chen, Fang-Xiang Wu	Improve Accuracy of Peptide Identification with Consistency between Peptides.	BIBM	2011	DBLP DOI BibTeX RDF
15	Natalia Novoselova, Frank Klawonn, Thorsten Johl, Tobias Reinl, Lothar Jänsch	Identification of Peptides with Deviating Regulation Factors Using a Robust Clustering Scheme.	PACBB	2011	DBLP DOI BibTeX RDF
15	Shashank Pandey	Bio-informatic and reverse proteomic approach to characterize peptides and proteins as antigens involved in autoimmune mechanism of neurological disorders.		2011	RDF
15	Yupeng Zhao, Yen-Han Lin	Whole-Cell Protein Identification Using the Concept of Unique Peptides.	Genom. Proteom. Bioinform.	2010	DBLP DOI BibTeX RDF
15	Xiao Zhu 0002, Peter H. Koenig, Michael Hoffmann 0006, Arun Yethiraj, Qiang Cui	Establishing effective simulation protocols for beta- and alpha/beta-peptides. III. Molecular mechanical model for acyclic beta-amino acids.	J. Comput. Chem.	2010	DBLP DOI BibTeX RDF
15	Young Kee Kang, Byung Jin Byun	Assessment of density functionals with long-range and/or empirical dispersion corrections for conformational energy calculations of peptides.	J. Comput. Chem.	2010	DBLP DOI BibTeX RDF
15	Xuewei Jiang, Changjun Chen, Yi Xiao	Improvements of network approach for analysis of the folding free-energy surface of peptides and proteins.	J. Comput. Chem.	2010	DBLP DOI BibTeX RDF
15	Eunkyoung Jung, Junhyoung Kim, Seung-Hoon Choi, Minkyoung Kim, Hokyoung Rhee, Jae-Min Shin, Kihang Choi, Sang-Kee Kang, Nam-Kyung Lee, Yun-Jaie Choi	Artificial neural network study on organ-targeting peptides.	J. Comput. Aided Mol. Des.	2010	DBLP DOI BibTeX RDF
15	Andrew J. Bordner, Hans D. Mittelmann	Prediction of the binding affinities of peptides to class II MHC using a regularized thermodynamic model.	BMC Bioinform.	2010	DBLP DOI BibTeX RDF
15	Khader Shameer, Lalima L. Madan, Shivamurthy Veeranna, Balasubramanian Gopal, Ramanathan Sowdhamini	PeptideMine - A webserver for the design of peptides for protein-peptide binding studies derived from protein-protein interactomes.	BMC Bioinform.	2010	DBLP DOI BibTeX RDF
15	Juan Liu, Lian Wang, Shanfeng Zhu	SVR-PAIRWISE method to predict MHC-II binding peptides.	Int. J. Bioinform. Res. Appl.	2010	DBLP DOI BibTeX RDF
15	Suman Sirimulla, Maricarmen Lerma, William C. Herndon	Prediction of Partial Molar Volumes of Amino Acids and Small Peptides: Counting Atoms versus Topological Indices.	J. Chem. Inf. Model.	2010	DBLP DOI BibTeX RDF
15	Wei Cui, Zhuo Wei, Quan Chen, Yuanhua Cheng, Lingling Geng, Jian Zhang 0037, Jianhua Chen, Tingjun Hou, Mingjuan Ji	Structure-Based Design of Peptides against G3BP with Cytotoxicity on Tumor Cells.	J. Chem. Inf. Model.	2010	DBLP DOI BibTeX RDF
15	Xihao Hu, Wenjian Zhou, Keiko Udaka, Hiroshi Mamitsuka, Shanfeng Zhu	MetaMHC: a meta approach to predict peptides binding to MHC molecules.	Nucleic Acids Res.	2010	DBLP DOI BibTeX RDF
15	Shaini Thomas, Shreyas Karnik, Ram Shankar Barai, Vaidyanathan K. Jayaraman, Susan Idicula-Thomas	CAMP: a useful resource for research on antimicrobial peptides.	Nucleic Acids Res.	2010	DBLP DOI BibTeX RDF
15	Bobbie-Jo M. Webb-Robertson, William R. Cannon, Christopher S. Oehmen, Anuj R. Shah, Vidhya Gurumoorthi, Mary S. Lipton, Katrina M. Waters	A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics.	Bioinform.	2010	DBLP DOI BibTeX RDF
15	Pantelis G. Bagos, Elisanthi P. Nikolaou, Theodore D. Liakopoulos, Konstantinos D. Tsirigos	Combined prediction of Tat and Sec signal peptides with hidden Markov models.	Bioinform.	2010	DBLP DOI BibTeX RDF
15	Eva Kranz	Structural Stability and Immunogenicity of Peptides	CoRR	2010	DBLP BibTeX RDF
15	Laurence Choulier, Karin Enander	Environmentally Sensitive Fluorescent Sensors Based on Synthetic Peptides.	Sensors	2010	DBLP DOI BibTeX RDF
15	Roberto Marchese, Rita Grandori, Paolo Carloni, Simone Raugei	On the Zwitterionic Nature of Gas-Phase Peptides and Protein Ions.	PLoS Comput. Biol.	2010	DBLP DOI BibTeX RDF
15	Wing-Cheong Wong, Sebastian Maurer-Stroh, Frank Eisenhaber	More Than 1, 001 Problems with Protein Domain Databases: Transmembrane Regions, Signal Peptides and the Issue of Sequence Homology.	PLoS Comput. Biol.	2010	DBLP DOI BibTeX RDF
15	Xueling Li, Shu-Lin Wang	A Comparative Study on Feature Selection in Regression for Predicting the Affinity of TAP Binding Peptides.	ICIC (2)	2010	DBLP DOI BibTeX RDF
15	Claus Lundegaard, M. Buggert, A. C. Karlsson, Ole Lund, Carina Perez, Morten Nielsen 0001	PopCover: a method for selecting of peptides with optimal population and pathogen coverage.	BCB	2010	DBLP DOI BibTeX RDF
15	Anmin Zheng, Shang-Bin Liu, Feng Deng	13C shielding tensors of crystalline amino acids and peptides: Theoretical predictions based on periodic structure models.	J. Comput. Chem.	2009	DBLP DOI BibTeX RDF
15	Hajime Okamoto, Tetsuo Yamada, Shuichiro Kihara, Kazumasa Takechi, Hiroyuki Takagi, Kyozaburo Takeda	Conformational transitions of cyclic D, L-peptides.	J. Comput. Chem.	2009	DBLP DOI BibTeX RDF
15	Chang-Liang Sun, Xiao-Nan Jiang, Chang-Sheng Wang	An analytic potential energy function for the amide-amide and amide-water intermolecular hydrogen bonds in peptides.	J. Comput. Chem.	2009	DBLP DOI BibTeX RDF
15	Michio Iwaoka, Naoki Kimura, Daisuke Yosida, Toshiya Minezaki	The SAAP force field: Development of the single amino acid potentials for 20 proteinogenic amino acids and Monte Carlo molecular simulation for short peptides.	J. Comput. Chem.	2009	DBLP DOI BibTeX RDF
15	Yan Zhang, Chang-Sheng Wang	Estimation on the intramolecular 10-membered ring N-H***O-C hydrogen-bonding energies in glycine and alanine peptides.	J. Comput. Chem.	2009	DBLP DOI BibTeX RDF
15	Austin B. Yongye, Yangmei Li, Marc A. Giulianotti, Yongping Yu, Richard A. Houghten, Karina Martínez-Mayorga	Modeling of peptides containing D-amino acids: implications on cyclization.	J. Comput. Aided Mol. Des.	2009	DBLP DOI BibTeX RDF
15	Jason W. H. Wong, Alexander B. Schwahn, Kevin M. Downard	ETISEQ - an algorithm for automated elution time ion sequencing of concurrently fragmented peptides for mass spectrometry-based proteomics.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
15	Claus A. Andersen, Stefano Gotta, Letizia Magnoni, Roberto Raggiaschi, Andreas Kremer, Georg C. Terstappen	Robust MS quantification method for phospho-peptides using 18O/16O labeling.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
15	Khar Heng Choo, Tin Wee Tan, Shoba Ranganathan	A comprehensive assessment of N-terminal signal peptides prediction methods.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
15	Uri Weingart, Yair Lavi, David Horn	Data mining of enzymes using specific peptides.	BMC Bioinform.	2009	DBLP DOI BibTeX RDF
15	Davor Juretic, Damir Vukicevic, Nada Ilic, Nikolinka Antcheva, Alessandro Tossi	Computational Design of Highly Selective Antimicrobial Peptides.	J. Chem. Inf. Model.	2009	DBLP DOI BibTeX RDF
15	Jan A. Hiss, Gisbert Schneider	Architecture, function and prediction of long signal peptides.	Briefings Bioinform.	2009	DBLP DOI BibTeX RDF
15	Nora C. Toussaint, Oliver Kohlbacher	OptiTope - a web server for the selection of an optimal set of peptides for epitope-based vaccines.	Nucleic Acids Res.	2009	DBLP DOI BibTeX RDF
15	Riadh Hammami, Jeannette Ben Hamida, Gérard Vergoten, Ismail Fliss	PhytAMP: a database dedicated to antimicrobial plant peptides.	Nucleic Acids Res.	2009	DBLP DOI BibTeX RDF
15	Véronique Dupierris, Christophe Masselon, Magali Court, Sylvie Kieffer-Jaquinod, Christophe Bruley	A toolbox for validation of mass spectrometry peptides identification and generation of database: IRMa.	Bioinform.	2009	DBLP DOI BibTeX RDF
15	Anton Dormer, Cathelina V. Pauleus, Mondy N. Syverin, Clarissa Dacil, Peta-Gaye Smile	Challenges in the Use of in silico Tools for Predicting Peptides Binding to HLA-Class II Molecules of HCV E1, E2, and P7.	Silico Biol.	2009	DBLP DOI BibTeX RDF
15	Carsten Henneges, Stefan Huster, Andreas Zell	An artificial t cell immune system for predicting MHC-II binding peptides.	ALIFE	2009	DBLP DOI BibTeX RDF
15	Cem Meydan, Osman Ugur Sezerman, Hasan H. Otu	Prediction of Peptides Binding to MHC Class I Alleles by Partial Periodic Pattern Mining.	IJCBS	2009	DBLP DOI BibTeX RDF
15	Satarudra Prakash Singh, Bhartendu Nath Mishra	Gibbs Motif Sampler, Weight Matrix and Artificial Neural Network for the Prediction of MHC Class-II Binding Peptides.	IC3	2009	DBLP DOI BibTeX RDF
15	Tanja Van Mourik	Comment on "Aromatic-Backbone Interactions in Model alpha-Helical Peptides" [Palermo et al., J Comput Chem 2007, 28, 1208].	J. Comput. Chem.	2008	DBLP DOI BibTeX RDF
15	József Csontos, Nicholas Y. Palermo, Richard F. Murphy, Sándor Lovas	Reply to "Comment on Aromatic-Backbone Interactions in Model alpha-Helical Peptides".	J. Comput. Chem.	2008	DBLP DOI BibTeX RDF
15	Pablo Echenique, José Luis Alonso	Efficient model chemistries for peptides. I. General framework and a study of the heterolevel approximation in RHF and MP2 with Pople split-valence basis sets.	J. Comput. Chem.	2008	DBLP DOI BibTeX RDF
15	Oliver J. Clarke, Martin J. Parker	Time-averaged predictions of folded and misfolded peptides using a reduced physicochemical model.	J. Comput. Chem.	2008	DBLP DOI BibTeX RDF
15	Tomonaga Ozawa, Kosuke Okazaki	CH/pi hydrogen bonds determine the selectivity of the Src homology 2 domain to tyrosine phosphotyrosyl peptides: An ab initio fragment molecular orbital study.	J. Comput. Chem.	2008	DBLP DOI BibTeX RDF
15	Luis P. B. Scott, Jorge Chahine, José R. Ruggiero	Use of genetic algorithms and solvation potential to study peptides structure.	Appl. Math. Comput.	2008	DBLP DOI BibTeX RDF
15	Luis P. B. Scott, Jorge Chahine, José R. Ruggiero	Predicting peptides structure with solvation potential and rotamer library dependent of the backbone.	Appl. Math. Comput.	2008	DBLP DOI BibTeX RDF
15	Erik Nordling, Yvonne Kallberg, Jan Johansson, Bengt Persson	Molecular dynamics studies of α-helix stability in fibril-forming peptides.	J. Comput. Aided Mol. Des.	2008	DBLP DOI BibTeX RDF
15	Allison Gehrke, Shaojun Sun, Lukasz A. Kurgan, Natalie Ahn, Katheryn Resing, Karen Kafadar, Krzysztof J. Cios	Improved machine learning method for analysis of gas phase chemistry of peptides.	BMC Bioinform.	2008	DBLP DOI BibTeX RDF
15	Cong Zhou, Lucas D. Bowler, Jianfeng Feng	A machine learning approach to explore the spectra intensity pattern of peptides using tandem mass spectrometry data.	BMC Bioinform.	2008	DBLP DOI BibTeX RDF
15	Wolfram Gronwald, Tim Hohm, Daniel Hoffmann	Evolutionary Pareto-optimization of stably folding peptides.	BMC Bioinform.	2008	DBLP DOI BibTeX RDF
15	Violaine Moreau, Cécile Fleury, Dominique Piquer, Christophe Nguyen, Nicolas Novali, Sylvie Villard, Daniel Laune, Claude Granier, Franck Molina	PEPOP: Computational design of immunogenic peptides.	BMC Bioinform.	2008	DBLP DOI BibTeX RDF
15	Claus Lundegaard, Kasper Lamberth, Mikkel Harndahl, Søren Buus, Ole Lund, Morten Nielsen 0001	NetMHC-3.0: accurate web accessible predictions of human, mouse and monkey MHC class I affinities for peptides of length 8-11.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
15	Ségolène Caboche, Maude Pupin, Valérie Leclère, Arnaud Fontaine, Philippe Jacques, Gregory Kucherov	NORINE: a database of nonribosomal peptides.	Nucleic Acids Res.	2008	DBLP DOI BibTeX RDF
15	Claus Lundegaard, Ole Lund, Morten Nielsen 0001	Accurate approximation method for prediction of class I MHC affinities for peptides of length 8, 10 and 11 using prediction tools trained on 9mers.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Anastasia Alexandridou, George T. Tsangaris, Konstantinos N. Vougas, Konstantina S. Nikita, George M. Spyrou	Peptide Finder: mapping measured molecular masses to peptides and proteins.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Changyu Shen, Zhiping Wang, Ganesh Shankar, Xiang Zhang 0003, Lang Li 0001	A hierarchical statistical model to assess the confidence of peptides and proteins inferred from tandem mass spectrometry.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Kosaku Shinoda, Masaru Tomita, Yasushi Ishihama	Aligning LC peaks by converting gradient retention times to retention index of peptides in proteomic experiments.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Håkan Viklund, Andreas Bernsel, Marcin J. Skwark, Arne Elofsson	SPOCTOPUS: a combined predictor of signal peptides and membrane protein topology.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Pedro Alves, Randy J. Arnold, David E. Clemmer, Yixue Li, James P. Reilly, Quanhu Sheng, Haixu Tang, Zhiyin Xun, Rong Zeng, Predrag Radivojac	Fast and accurate identification of semi-tryptic peptides in shotgun proteomics.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Ido Ginodi, Tal Vider-Shalit, Lea Tsaban, Yoram Louzoun	Precise score for the prediction of peptides cleaved by the proteasome.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Bobbie-Jo M. Webb-Robertson, William R. Cannon, Christopher S. Oehmen, Anuj R. Shah, Vidhya Gurumoorthi, Mary S. Lipton, Katrina M. Waters	A support vector machine model for the prediction of proteotypic peptides for accurate mass and time proteomics.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Dihui Lu, Richard Z. Liu, Victoria Izumi, David A. Fenstermacher, Eric B. Haura, John M. Koomen, Steven Eschrich	IPEP: an in silico tool to examine proteolytic peptides for mass spectrometry.	Bioinform.	2008	DBLP DOI BibTeX RDF
15	Hajime Ogawa, Miki Nakano, Hirofumi Watanabe, E. B. Starikov, Stuart M. Rothstein, Shigenori Tanaka	Molecular dynamics simulation study on the structural stabilities of polyglutamine peptides.	Comput. Biol. Chem.	2008	DBLP DOI BibTeX RDF
15	Nora C. Toussaint, Pierre Dönnes, Oliver Kohlbacher	A Mathematical Framework for the Selection of an Optimal Set of Peptides for Epitope-Based Vaccines.	PLoS Comput. Biol.	2008	DBLP DOI BibTeX RDF
15	Ole Schulz-Trieglaff, Rene Hussong, Clemens Gröpl, Andreas Leinenbach, Andreas Hildebrandt 0001, Christian G. Huber, Knut Reinert	Computational Quantification of Peptides from LC-MS Data.	J. Comput. Biol.	2008	DBLP DOI BibTeX RDF
15	Jingjing Sun, Lipo Wang	Predicting Signal Peptides and Their Cleavage Sites Using Support Vector Machines and Improved Position Weight Matrixes.	ICNC (5)	2008	DBLP DOI BibTeX RDF
15	Lukas Käll, John D. Storey, William Stafford Noble	Non-parametric estimation of posterior error probabilities associated with peptides identified by tandem mass spectrometry.	ECCB	2008	DBLP DOI BibTeX RDF
15	Nicholas Y. Palermo, József Csontos, Michael C. Owen, Richard F. Murphy, Sándor Lovas	Aromatic-backbone interactions in model alpha-helical peptides.	J. Comput. Chem.	2007	DBLP DOI BibTeX RDF
15	Nicholas Y. Palermo, József Csontos, Michael C. Owen, Richard F. Murphy, Sándor Lovas	Aromatic-backbone interactions in model alpha-helical peptides.	J. Comput. Chem.	2007	DBLP DOI BibTeX RDF
15	Xiaoqing Liu, Zhilong Xiu, Xiaohui Li	Numerical characterization of the conformation of cyclic peptides and its application.	J. Comput. Chem.	2007	DBLP DOI BibTeX RDF
15	Menaka Rajapakse, Bertil Schmidt, Feng Lin 0002, Vladimir Brusic	Predicting peptides binding to MHC class II molecules using multi-objective evolutionary algorithms.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
15	William S. Sanders, Susan M. Bridges, Fiona M. McCarthy, Bindu Nanduri, Shane C. Burgess	Prediction of peptides observable by mass spectrometry applied at the experimental set level.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
15	Timur Shtatland, Daniel Guettler, Misha Kossodo, Misha Pivovarov, Ralph Weissleder	PepBank - a database of peptides based on sequence text mining and public peptide data sources.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
15	Sneh Lata, B. K. Sharma, G. P. S. Raghava	Analysis and prediction of antibacterial peptides.	BMC Bioinform.	2007	DBLP DOI BibTeX RDF
15	Shalin Seebah, Anita Suresh, Shaowei Zhuo, Yong How Choong, Hazel Chua, Danny Chuon, Roger Beuerman, Chandra Verma	Defensins knowledgebase: a manually curated database and information source focused on the defensins family of antimicrobial peptides.	Nucleic Acids Res.	2007	DBLP DOI BibTeX RDF
15	Itay Mayrose, Osnat Penn, Elana Erez, Nimrod D. Rubinstein, Tomer Shlomi, Natalia Tarnovitski Freund, Erez M. Bublil, Eytan Ruppin, Roded Sharan, Jonathan M. Gershoni, Eric Martz, Tal Pupko	Pepitope: epitope mapping from affinity-selected peptides.	Bioinform.	2007	DBLP DOI BibTeX RDF
15	Ersin Emre Oren, Candan Tamerler, Deniz Sahin, Marketa Hnilova, Urartu Ozgur Safak Seker, Mehmet Sarikaya, Ram Samudrala	A novel knowledge-based approach to design inorganic-binding peptides.	Bioinform.	2007	DBLP DOI BibTeX RDF
15	Chun-Wei Tung, Shinn-Ying Ho	POPI: predicting immunogenicity of MHC class I binding peptides by mining informative physicochemical properties.	Bioinform.	2007	DBLP DOI BibTeX RDF
15	Christopher D. Fjell, Robert E. W. Hancock, Artem Cherkasov	AMPer: a database and an automated discovery tool for antimicrobial peptides.	Bioinform.	2007	DBLP DOI BibTeX RDF
15	Anton A. Polyansky, Pavel E. Volynsky, Roman G. Efremov	Computer Simulations of Membrane-Lytic peptides: Perspectives in Drug Design.	J. Bioinform. Comput. Biol.	2007	DBLP DOI BibTeX RDF
15	Vered Kunik, Yasmine Meroz, Zach Solan, Ben Sandbank, Uri Weingart, Eytan Ruppin, David Horn	Functional Representation of Enzymes by Specific Peptides.	PLoS Comput. Biol.	2007	DBLP DOI BibTeX RDF
15	Wang Lian, Liu Juan, Luo Fei	Prediction of MHC Class II Binding Peptides Using a Multi-Objective Evolutionary Algorithm.	CIS	2007	DBLP DOI BibTeX RDF
15	Seongho Moon, David A. Case	A comparison of quantum chemical models for calculating NMR shielding parameters in peptides: Mixed basis set and ONIOM methods combined with a complete basis set extrapolation.	J. Comput. Chem.	2006	DBLP DOI BibTeX RDF
15	Zhi-Xiang Wang, Wei Zhang, Chun Wu, Hongxing Lei, Piotr Cieplak, Yong Duan	Erratum - Strike a balance: Optimization of backbone torsion parameters of AMBER polarizable force field for simulations of proteins and peptides.	J. Comput. Chem.	2006	DBLP DOI BibTeX RDF
15	Yu Zhou 0002, Chris Oostenbrink, Aldo Jongejan, Wilfred F. van Gunsteren, Wilfred R. Hagen, Simon W. De Leeuw, Jaap A. Jongejan	Computational study of ground-state chiral induction in small peptides: Comparison of the relative stability of selected amino acid dimers and oligomers in homochiral and heterochiral combinations.	J. Comput. Chem.	2006	DBLP DOI BibTeX RDF
15	Zhi-Xiang Wang, Wei Zhang, Chun Wu, Hongxing Lei, Piotr Cieplak, Yong Duan	Strike a balance: Optimization of backbone torsion parameters of AMBER polarizable force field for simulations of proteins and peptides.	J. Comput. Chem.	2006	DBLP DOI BibTeX RDF
15	Ji Wan, Wen Liu, Qiqi Xu, Yongliang Ren, Darren R. Flower, Tongbin Li	SVRMHC prediction server for MHC-binding peptides.	BMC Bioinform.	2006	DBLP DOI BibTeX RDF
15	Joo Chuan Tong, Tin Wee Tan, Animesh A. Sinha, Shoba Ranganathan	Prediction of desmoglein-3 peptides reveals multiple shared T-cell epitopes in HLA DR4- and DR6- associated Pemphigus vulgaris.	BMC Bioinform.	2006	DBLP DOI BibTeX RDF
15	Bruce R. Southey, Andinet Amare, Tyler A. Zimmerman, Sandra L. Rodriguez-Zas, Jonathan V. Sweedler	NeuroPred: a tool to predict cleavage sites in neuropeptide precursors and provide the masses of the resulting peptides.	Nucleic Acids Res.	2006	DBLP DOI BibTeX RDF
15	Pierre Dönnes, Oliver Kohlbacher	SVMHC: a server for prediction of MHC-binding peptides.	Nucleic Acids Res.	2006	DBLP DOI BibTeX RDF
15	Ze-Rong Li, Honghuang Lin, Lianyi Han, L. Jiang, X. Chen, Yu Zong Chen	PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence.	Nucleic Acids Res.	2006	DBLP DOI BibTeX RDF
15	Joo Chuan Tong, Guanglan Zhang, Tin Wee Tan, J. Thomas August, Vladimir Brusic, Shoba Ranganathan	Prediction of HLA-DQ3.2ß Ligands: evidence of multiple registers in class II binding peptides.	Bioinform.	2006	DBLP DOI BibTeX RDF
15	Alexander J. Marchut, Carol K. Hall	Spontaneous formation of annular structures observed in molecular dynamics simulations of polyglutamine peptides.	Comput. Biol. Chem.	2006	DBLP DOI BibTeX RDF
15	Chenhong Zhang, Mikelis G. Bickis, Fang-Xiang Wu, Anthony J. Kusalik	Optimally-connected Hidden Markov Models for Predicting Mhc-binding Peptides.	J. Bioinform. Comput. Biol.	2006	DBLP DOI BibTeX RDF
15	Alfonso Benítez-Páez	Sequence Analysis of the Receptor Activity-Modifying Proteins Family, New Putative Peptides and Structural Conformation Inferenc.	Silico Biol.	2006	DBLP BibTeX RDF
15	Bosco K. Ho, Ken A. Dill	Folding Very Short Peptides Using Molecular Dynamics.	PLoS Comput. Biol.	2006	DBLP DOI BibTeX RDF
15	Bosco K. Ho, Ken A. Dill	Correction: Folding Very Short Peptides Using Molecular Dynamics.	PLoS Comput. Biol.	2006	DBLP DOI BibTeX RDF