Search results for "biology"

Hits ?▲	Authors	Title	Venue	Year	Link
25	Aaron David Goldman, Elizabeth M. Stein, John R. Bracht, Laura F. Landweber	Programmed Genome Processing in Ciliates.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Naomi Fox, Ileana Streinu	Redundant and Critical Noncovalent Interactions in Protein Rigid Cluster Analysis.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Kenneth L. Baker	Site-Specific Recombination on Unknot and Unlink Substrates Producing Two-Bridge Links.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Angela Angeleska, Sabrina Kleessen, Zoran Nikoloski	The Sequence Reconstruction Problem.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Kai Ishihara, Koya Shimokawa, Mariel Vázquez	Site-Specific Recombination Modeled as a Band Surgery: Applications to Xer Recombination.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Katarzyna A. Rejniak	IBCell Morphocharts: A Computational Model for Linking Cell Molecular Activity with Emerging Tissue Morphology.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Paola Bonizzoni, Anna Paola Carrieri, Gianluca Della Vedova, Riccardo Dondi, Teresa M. Przytycka	When and How the Perfect Phylogeny Model Explains Evolution.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Alessandra Carbone	Extracting Coevolving Characters from a Tree of Species.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Giuditta Franco	Perspectives in Computational Genome Analysis.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Robert Brijder, Hendrik Jan Hoogeboom	The Algebra of Gene Assembly in Ciliates.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Dorothy Buck	Reactions Mediated by Topoisomerases and Other Enzymes: Modelling Localised DNA Transformations.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Michael A. Savageau, Jason G. Lomnitz	Deconstructing Complex Nonlinear Models in System Design Space.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Isabel K. Darcy, Stephen D. Levene, Robert G. Scharein	Introduction to DNA Topology.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Massa J. Shoura, Stephen D. Levene	Understanding DNA Looping Through Cre-Recombination Kinetics.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Christine E. Heitsch, Svetlana Poznanovic	Combinatorial Insights into RNA Secondary Structure.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Casian Pantea, Ankur Gupta, James B. Rawlings, Gheorghe Craciun	The QSSA in Chemical Kinetics: As Taught and as Practiced.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Meera Sitharam	Modeling Autonomous Supramolecular Assembly.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Joanna A. Ellis-Monaghan, Greta Pangborn, Laura Beaudin, David Miller, Nick Bruno, Akie Hashimoto	Minimal Tile and Bond-Edge Types for Self-Assembling DNA Graphs.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Vidit Nanda, Radmila Sazdanovic	Simplicial Models and Topological Inference in Biological Systems.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Mark Daley	An Invitation to the Study of Brain Networks, with Some Statistical Analysis of Thresholding Techniques.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Egor Dolzhenko, Karin Valencia	Invariants of Graphs Modeling Nucleotide Rearrangements.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Paolo Cermelli, Giuliana Indelicato, Reidun Twarock	The Role of Symmetry in Conformational Changes of Viral Capsids: A Mathematical Approach.	Discrete and Topological Models in Molecular Biology	2014	DBLP DOI BibTeX RDF
25	Guergana Savova, Kevin Bretonnel Cohen, Galia Angelova (eds.)	Proceedings of the Workshop on NLP for Medicine and Biology associated with RANLP 2013, Hissar, Bulgaria, September 13, 2013	RANLP (Medicine and Biology)	2013	DBLP BibTeX RDF
25	Genevieve Gorrell, Angus Roberts, Richard G. Jackson, Robert Stewart 0002	Finding Negative Symptoms of Schizophrenia in Patient Records.	RANLP (Medicine and Biology)	2013	DBLP BibTeX RDF
25	Dmitriy Dligach, Timothy A. Miller, Guergana Savova	Active Learning for Phenotyping Tasks.	RANLP (Medicine and Biology)	2013	DBLP BibTeX RDF
25	Elyne Scheurwegs, Kim Luyckx, Filip Van der Schueren, Tim Van den Bulcke	De-Identification of Clinical Free Text in Dutch with Limited Training Data: A Case Study.	RANLP (Medicine and Biology)	2013	DBLP BibTeX RDF
25	Marina Sokolova, Ilya Ioshikhes, Hamid Poursepanj, Alex MacKenzie	NLP can help parents to understand rare diseases.	RANLP (Medicine and Biology)	2013	DBLP BibTeX RDF
25	Corrado Priami, Ion Petre, Erik P. de Vink (eds.)	Transactions on Computational Systems Biology XIV - Special Issue on Computational Models for Cell Processes	Trans. Computational Systems Biology	2012	DBLP DOI BibTeX RDF
25	Lubos Brim, Jana Fabriková, Sven Drazan, David Safránek	On Approximative Reachability Analysis of Biochemical Dynamical Systems.	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Qixia Yuan, Panuwat Trairatphisan, Jun Pang 0001, Sjouke Mauw, Monique Wiesinger, Thomas Sauter	Probabilistic Model Checking of the PDGF Signaling Pathway.	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Cristian Versari, Gianluigi Zavattaro	Complex Functional Rates in Rule-Based Languages for Biochemistry.	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Andrzej Mizera, Eugen Czeizler, Ion Petre	Self-assembly Models of Variable Resolution.	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Rodrick Wallace	Metabolic Constraints on the Evolution of Genetic Codes: Did Multiple Preaerobic' Ecosystem Transitions Entrain Richer Dialects via Serial Endosymbiosis?	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Oana Andrei, Muffy Calder	Trend-Based Analysis of a Population Model of the AKAP Scaffold Protein.	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Ezio Bartocci, Pietro Liò, Emanuela Merelli, Nicola Paoletti	Multiple Verification in Complex Biological Systems: The Bone Remodelling Case Study.	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Alessio Angius, András Horváth, Verena Wolf	Quasi Product Form Approximation for Markov Models of Reaction Networks.	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Andrzej Ehrenfeucht, Jetty Kleijn, Maciej Koutny, Grzegorz Rozenberg	Minimal Reaction Systems.	Trans. Comp. Sys. Biology	2012	DBLP DOI BibTeX RDF
25	Corrado Priami, Ralph-Johan Back, Ion Petre, Erik P. de Vink (eds.)	Transactions on Computational Systems Biology XIII	Trans. Computational Systems Biology	2011	DBLP DOI BibTeX RDF
25	Loïc Paulevé, Morgan Magnin, Olivier F. Roux	Refining Dynamics of Gene Regulatory Networks in a Stochastic p-Calculus Framework.	Trans. Comp. Sys. Biology	2011	DBLP DOI BibTeX RDF
25	Antti Häkkinen, Fred G. Biddle, Olli-Pekka Smolander, Olli Yli-Harja, Andre S. Ribeiro	Evolutionary Dynamics of a Population of Cells with a Toxin Suppressor Gene.	Trans. Comp. Sys. Biology	2011	DBLP DOI BibTeX RDF
25	Ovidiu Radulescu, Anne Siegel, Elisabeth Pécou, Clément Chatelain 0001, Sandrine Lagarrigue	Genetically Regulated Metabolic Networks: Gale-Nikaido Modules and Differential Inequalities.	Trans. Comp. Sys. Biology	2011	DBLP DOI BibTeX RDF
25	Laurence Loewe, Maria Luisa Guerriero, Steven Watterson, Stuart L. Moodie, Peter Ghazal, Jane Hillston	Translation from the Quantified Implicit Process Flow Abstraction in SBGN-PD Diagrams to Bio-PEPA Illustrated on the Cholesterol Pathway.	Trans. Comp. Sys. Biology	2011	DBLP DOI BibTeX RDF
25	Roberto Barbuti, Giulio Caravagna, Andrea Maggiolo-Schettini, Paolo Milazzo	Delay Stochastic Simulation of Biological Systems: A Purely Delayed Approach.	Trans. Comp. Sys. Biology	2011	DBLP DOI BibTeX RDF
25	Rodrick Wallace, Deborah Wallace	Cultural Epigenetics: On the Heritability of Complex Diseases.	Trans. Comp. Sys. Biology	2011	DBLP DOI BibTeX RDF
25	Mario Coppo, Ferruccio Damiani, Maurizio Drocco, Elena Grassi, Mike Guether, Angelo Troina	Modelling Ammonium Transporters in Arbuscular Mycorrhiza Symbiosis.	Trans. Comp. Sys. Biology	2011	DBLP DOI BibTeX RDF
25	Rhys Goldstein, Gabriel A. Wainer	Impulse-Based Dynamic Simulation of Deformable Biological Structures.	Trans. Comp. Sys. Biology	2011	DBLP DOI BibTeX RDF
25	Wilfred Ndifon, Jonathan Dushoff	Finding Attractors on a Folding Energy Landscape.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Guo-Cheng Yuan	Prediction of Epigenetic Target Sites by Using Genomic DNA Sequence.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Jean-François Ganghoffer	Mechanical Models of Cell Adhesion Incorporating Nonlinear Behavior and Stochastic Rupture of the Bonds: Concepts and Preliminary Results.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Wei Ding, Ping Qiu, Yan-Hui Liu, Wenqing Feng	Current Omics Technologies in Biomarker Discovery.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Giacomo Aletti, Paola Causin, Giovanni Naldi, Matteo Semplice	A Multiscale Computational Model of Chemotactic Axon Guidance.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Kathryn Dempsey, Benjamin Currall, Richard Hallworth, Hesham H. Ali	A New Approach for Sequence Analysis: Illustrating an Expanded Bioinformatics View through Exploring Properties of the Prestin Protein.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Bolan Linghu, Guohui Liu, Yu Xia 0002	Using Functional Linkage Gene Networks to Study Human Diseases.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Khaled H. Barakat, Jonathan Y. Mane, Jack A. Tuszynski	Virtual Screening: An Overview on Methods and Applications.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Palaniappan Sethu, Kalyani Putty, Yongsheng Lian, Awdhesh Kalia	Connecting Microbial Population Genetics with Microbial Pathogenesis Engineering Microfluidic Cell Arrays for High-throughput Interrogation of Host-Pathogen Interaction.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	George V. Popescu, Sorina C. Popescu	Complexity and Modularity of MAPK Signaling Networks.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Alain B. Tchagang, Youlian Pan, Fazel Famili, Ahmed H. Tewfik, Panayiotis V. Benos	Biclustering of DNA Microarray Data: Theory, Evaluation, and Applications.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Madhusudan Natarajan	Unsupervised Methods to Identify Cellular Signaling Networks from Perturbation Data.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Rui-Ru Ji	Single Nucleotide Polymorphism and its Application in Mapping Loci Involved in Developing Human Diseases and Traits.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Padmalatha S. Reddy, Stuart Murray, Wei Liu	Knowledge-Driven, Data-Assisted Integrative Pathway Analytics.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Fortunato Bianconi, Gabriele Lillacci, Paolo Valigi	Dynamic Modeling and Parameter Identification for Biological Networks: Application to the DNA Damage and Repair Processes.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Thomas K. F. Wong, Siu-Ming Yiu	Structural Alignment of RNAs with Pseudoknots.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Bing Zhang 0003, Zhiao Shi	Modules in Biological Networks: Identification and Application.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Victoria Petri	Pathway Resources at the Rat Genome Database: A Dynamic Platform for Integrating Gene, Pathway and Disease Information.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Daniel Ziemek, Christoph Brockel	Network-Driven Analysis Methods and their Application to Drug Discovery.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Swadha Anand, Debasisa Mohanty	Computational Methods for Identification of Novel Secondary Metabolite Biosynthetic Pathways by Genome Analysis.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Maxime Garcia, Olivier Stahl, Pascal Finetti, Daniel Birnbaum, François Bertucci, Ghislain Bidaut	Linking Interactome to Disease: A Network-Based Analysis of Metastatic Relapse in Breast Cancer.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Vicente M. Reyes, Vrunda Sheth	Visualization of Protein 3D Structures in 'Double-Centroid' Reduced Representation: Application to Ligand Binding Site Modeling and Screening.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Yingchun Liu	Cancer and Signaling Pathway Deregulation.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Kristine A. Pattin, Jason H. Moore	Addressing the Challenges of Detecting Epistasis in Genome-Wide Association Studies of Common Human Diseases Using Biological Expert Knowledge.	Handbook of Research on Computational and Systems Biology	2011	DBLP DOI BibTeX RDF
25	Luca Bortolussi, Andrea Sgarro, Giuseppe Longobardi, Cristina Guardiano	How many possible languages are there?	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Henning Christiansen 0001, Christian Theil Have, Ole Torp Lassen, Matthieu Petit	Taming the Zoo of Discrete HMM Subspecies & Some of their Relatives.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Lakshmanan Kuppusamy, Anand Mahendran, Éric Villemonte de la Clergerie	Modelling Intermolecular Structures and Defining Ambiguity in Gene Sequences using Matrix Insertion-Deletion Systems.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Gemma Bel Enguix, Alexander Krassovitskiy, Yurii Rogozhin, Sergey Verlan	On the Lower Bounds for Asymmetrical Insertion-deletion Languages.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Roussanka Loukanova	Syntax-Semantics Interface for Lexical Inflection with the Language of Acyclic Recursion.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Roussanka Loukanova	From Montague's Rules of Quantification to Minimal Recursion Semantics and the Language of Acyclic Recursion.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Verónica Dahl, Sara Saghaei, Oliver Schulte	Deidentification within Unstructured Medical Records.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Dariusz Plewczynski	Cognitive architectures in multi-agent systems.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Leonor Becerra-Bonache, María Dolores Jiménez-López	A Language-Acquisition-Based Approach to Grammatical Inference.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Erzsébet Csuhaj-Varjú	On Two Models in Bio-Inspired Computing: Membrane Systems and Networks of Evolutionary Processors.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Philippe Blache	A computational model for linguistic complexity.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Christian Theil Have, Henning Christiansen 0001	Modeling Repeats in DNA Using Probabilistic Extended Regular Expressions.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Pedro Gómez Vilda, María Victoria Rodellar Biarge, Cristina Muñoz-Mulas, Luis Miguel Mazaira-Fernández, José Manuel Ferrández de Vicente	Vowel-Consonant Speech Segmentation by Neuromorphic Units.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Tom Head	How the Structure of DNA Molecules Provides Tools for Computation.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Gemma Bel Enguix, María Dolores Jiménez-López	Genetic Code and Verbal Language: Syntactic and Semantic Analogies.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Gemma Bel Enguix, Verónica Dahl, María Dolores Jiménez-López	Using Concept Formation for Mining Linguistic and Biological Texts.	Biology, Computation and Linguistics	2011	DBLP DOI BibTeX RDF
25	Corrado Priami, Rainer Breitling, David R. Gilbert, Monika Heiner, Adelinde M. Uhrmacher (eds.)	Transactions on Computational Systems Biology XII, Special Issue on Modeling Methodologies	Trans. Computational Systems Biology	2010	DBLP DOI BibTeX RDF
25	Alberto Apostolico, Andreas W. M. Dress, Laxmi Parida (eds.)	Structure Discovery in Biology: Motifs, Networks & Phylogenies, 06.06. - 11.06.2010	Structure Discovery in Biology: Motifs, Networks & Phylogenies	2010	DBLP BibTeX RDF
25	Rainer Breitling, Robin Donaldson, David R. Gilbert, Monika Heiner	Biomodel Engineering - From Structure to Behavior.	Trans. Comp. Sys. Biology	2010	DBLP DOI BibTeX RDF
25	Michael Pedersen, Gordon D. Plotkin	A Language for Biochemical Systems: Design and Formal Specification.	Trans. Comp. Sys. Biology	2010	DBLP DOI BibTeX RDF
25	Mathias John, Cédric Lhoussaine, Joachim Niehren, Adelinde M. Uhrmacher	The Attributed Pi-Calculus with Priorities.	Trans. Comp. Sys. Biology	2010	DBLP DOI BibTeX RDF
25	Antje Beyer, Peter Thomason, Xinzhong Li, James Scott, Jasmin Fisher	Mechanistic Insights into Metabolic Disturbance during Type-2 Diabetes and Obesity Using Qualitative Networks.	Trans. Comp. Sys. Biology	2010	DBLP DOI BibTeX RDF
25	Céline Kuttler, Cédric Lhoussaine, Mirabelle Nebut	Rule-Based Modeling of Transcriptional Attenuation at the Tryptophan Operon.	Trans. Comp. Sys. Biology	2010	DBLP DOI BibTeX RDF
25	Roberto Larcher, Corrado Priami, Alessandro Romanel	Modelling Self-assembly in BlenX.	Trans. Comp. Sys. Biology	2010	DBLP DOI BibTeX RDF
25	Federica Ciocchetta, Andrea Degasperi, John K. Heath, Jane Hillston	Modelling and Analysis of the NF-kappaB Pathway in Bio-PEPA.	Trans. Comp. Sys. Biology	2010	DBLP DOI BibTeX RDF
25	John Angus, Matthew J. Beal, Juan Li, Claudia Rangel, David L. Wild	Inferring Transcriptional Networks Using Prior Biological Knowledge and Constrained State-Space Models.	Learning and Inference in Computational Systems Biology	2010	DBLP BibTeX RDF
25	Johannes Jaeger, Nicholas A. M. Monk	Reverse Engineering of Gene Regulatory Networks.	Learning and Inference in Computational Systems Biology	2010	DBLP BibTeX RDF
25	Darren J. Wilkinson, Andrew Golightly	Markov Chain Monte Carlo Algorithms for SDE Parameter Estimation.	Learning and Inference in Computational Systems Biology	2010	DBLP BibTeX RDF
25	Neil D. Lawrence, Magnus Rattray	A Brief Introduction to Bayesian Inference.	Learning and Inference in Computational Systems Biology	2010	DBLP BibTeX RDF
25	Mark Girolami, Ben Calderhead, Vladislav Vyshemirsky	System Identification and Model Ranking: The Bayesian Perspective.	Learning and Inference in Computational Systems Biology	2010	DBLP BibTeX RDF