Search results for "protein"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
29	Deok-Soo Kim, Donguk Kim 0001, Youngsong Cho, Joonghyun Ryu, Cheol-Hyung Cho, Joon Young Park, Hyun-Chan Lee	Visualization and Analysis of Protein Structures Using Euclidean Voronoi Diagram of Atoms.	ICCSA (3)	2005	DBLP DOI BibTeX RDF
29	Andy Auyeung, Ulrich Melcher	Evaluations of Protein Sequence Alignments using Structural Information.	ITCC (2)	2005	DBLP DOI BibTeX RDF
29	Pedro Gabriel Ferreira, Paulo J. Azevedo	Protein Sequence Classification Through Relevant Sequence Mining and Bayes Classifiers.	EPIA	2005	DBLP DOI BibTeX RDF
29	Jeanne Chen, Tung-Shou Chen, Tzu-Hsin Tsai, Hui-Fang Tsai, Mingli Hsieh, Shih-Shan Tang	Using the ACM Technique to Refine Protein Spots in 2DGE Images.	AINA	2005	DBLP DOI BibTeX RDF
29	Elizabeth Eskow, Brett W. Bader, Richard H. Byrd, Silvia N. Crivelli, Teresa Head-Gordon, Vincent Lamberti, Robert B. Schnabel	An optimization approach to the problem of protein structure prediction.	Math. Program.	2004	DBLP DOI BibTeX RDF
29	Richard M. Karp	Algorithms for inferring cis-regulatory structures and protein interaction networks.	RECOMB	2004	DBLP DOI BibTeX RDF
29	Shawna L. Thomas, Nancy M. Amato	Parallel Protein Folding with STAPL.	IPDPS	2004	DBLP DOI BibTeX RDF
29	Hee Young Kang, Hak Yong Kim	Functional Modules from Protein Networks of Kinome and Cell Cycle in Saccharomyces Cerevisiae.	CSB	2004	DBLP DOI BibTeX RDF
29	Thomas Herges, Alexander Schug, Wolfgang Wenzel	Protein Structure Prediction with Stochastic Optimization Methods: Folding and Misfolding the Villin Headpiece.	ICCSA (3)	2004	DBLP DOI BibTeX RDF
29	Jing He 0002, Yonggang Lu, Enrico Pontelli	A Parallel Algorithm for Helix Mapping Between 3D and 1D Protein Structure Using the Length Constraints.	ISPA	2004	DBLP DOI BibTeX RDF
29	Martin Chew Wooi Keat, Rosni Abdullah, Rosalina Abdul Salam, Aishah Abdul Latif	Weightless Neural Network Array for Protein Classification.	PDCAT	2004	DBLP DOI BibTeX RDF
29	John A. Rose, Mitsunori Takano, Masami Hagiya, Akira Suyama	A DNA Computing-based Genetic Program for In Vitro Protein Evolution via Constrained Pseudomodule Shuffling.	Genet. Program. Evolvable Mach.	2003	DBLP DOI BibTeX RDF
29	Alena Shmygelska, Holger H. Hoos	An Improved Ant Colony Optimisation Algorithm for the 2D HP Protein Folding Problem.	AI	2003	DBLP DOI BibTeX RDF
29	Krishna Gopalakrishnan, Kayvan Najarian	Prediction of Protein Function Using Signal Processing of Biochemical Properties.	CSB	2003	DBLP DOI BibTeX RDF
29	Víctor Robles, María S. Pérez 0001, Vanessa Herves, José M. Peña 0002, Pedro Larrañaga	Parallel Stochastic Search for Protein Secondary Structure Prediction.	PPAM	2003	DBLP DOI BibTeX RDF
29	Jinbo Xu	Speedup LP Approach to Protein Threading via Graph Reduction.	WABI	2003	DBLP DOI BibTeX RDF
29	Hyongguen Kim, Jong-Chan Park, Kyungsook Han	Predicting Protein Interactions in Human by Homologous Interactions in Yeast.	PAKDD	2003	DBLP DOI BibTeX RDF
29	Jack Y. Yang, Mary Qu Yang, Okan K. Ersoy	Exploring Protein Functional Relationships Using Genomic Information and Data Mining Techniques.	ICANN	2003	DBLP DOI BibTeX RDF
29	Li Liao, William Stafford Noble	Combining pairwise sequence similarity and support vector machines for remote protein homology detection.	RECOMB	2002	DBLP DOI BibTeX RDF
29	John A. Rose, Mitsunori Takano, Akira Suyama	A PNA-mediated Whiplash PCR-based Program for In Vitro Protein Evolution.	DNA	2002	DBLP DOI BibTeX RDF
29	Jiong Yang 0001, Wei Wang 0010	Towards Automatic Clustering of Protein Sequences.	CSB	2002	DBLP DOI BibTeX RDF
29	Baohong Zhang, Adam Godzik	The Meaning and Limitations of Protein Structure Alignments.	3DPVT	2002	DBLP DOI BibTeX RDF
29	Jadwiga R. Bienkowska, Hongxian He, Temple F. Smith	Automatic Pattern Embedding in Protein Structure Models.	IEEE Intell. Syst.	2001	DBLP DOI BibTeX RDF
29	Ting Chen, Jacob D. Jaffe, George M. Church	Algorithms for identifying protein cross-links via tandem mass spectrometry.	RECOMB	2001	DBLP DOI BibTeX RDF
29	Ernst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof, Peter Müller 0008	A combinatorial approach to protein docking with flexible side-chains.	RECOMB	2000	DBLP DOI BibTeX RDF
29	Christopher Bailey-Kellogg, Alik Widge, John J. Kelley 0001, Marcelo J. Berardi, John H. Bushweller, Bruce Randall Donald	The NOESY jigsaw: automated protein secondary structure and main-chain assignment from sparse, unassigned NMR data.	RECOMB	2000	DBLP DOI BibTeX RDF
29	Maricel Kann, Richard A. Goldstein	Optimizing for success: a new score function for distantly related protein sequence comparison.	RECOMB	2000	DBLP DOI BibTeX RDF
29	Rolf Backofen	Constraint Techniques for Solving the Protein Structure Prediction Problem.	CP	1998	DBLP DOI BibTeX RDF
29	Ka-Chun Wong, Kwong-Sak Leung, Man Hon Wong 0001	Protein structure prediction on a lattice model via multimodal optimization techniques.	GECCO	2010	DBLP DOI BibTeX RDF	absolute encoding, hp lattice model, relative encoding, evolutionary algorithm, protein structure prediction, distance metric, crowding, multimodal optimization, fitness sharing
29	Eagu Kim, Travis J. Wheeler, John D. Kececioglu	Learning Models for Aligning Protein Sequences with Predicted Secondary Structure.	RECOMB	2009	DBLP DOI BibTeX RDF	inverse parametric alignment, substitution score matrices, affine gap penalties, Sequence alignment, protein secondary structure
29	Huma Lodhi, Stephen H. Muggleton, Michael J. E. Sternberg	Multi-class protein fold recognition using large margin logic based divide and conquer learning.	KDD Workshop on Statistical and Relational Learning in Bioinformatics	2009	DBLP DOI BibTeX RDF	protein fold recognition, support vector inductive logic programming, evaluation, support vector machines, bioinformatics, inductive logic programming, multi-class classification
29	Uros Midic, A. Keith Dunker, Zoran Obradovic	Protein sequence alignment and structural disorder: a substitution matrix for an extended alphabet.	KDD Workshop on Statistical and Relational Learning in Bioinformatics	2009	DBLP DOI BibTeX RDF	protein sequence alignment, structurally disordered proteins, substitution matrices
29	Dariusz Mrozek, Bozena Malysiak-Mrozek, Stanislaw Kozielski, Sylwia Górczynska-Kosiorz	The EDML Format to Exchange Energy Profiles of Protein Molecular Structures.	ICIC (1)	2009	DBLP DOI BibTeX RDF	energy profiles, XML, databases, bioinformatics, protein structure
29	Hiroshi Someya, Kensaku Sakamoto, Masayuki Yamamura	Biologically-implemented genetic algorithm for protein engineering.	GECCO	2009	DBLP DOI BibTeX RDF	biological implementation, protein engineering, genetic algorithm, simulation, modeling, combinatorial optimization, dna computing, molecular evolution
29	Valentina Sulimova, Vadim Mottl, Boris G. Mirkin, Ilya B. Muchnik, Casimir A. Kulikowski	A Class of Evolution-Based Kernels for Protein Homology Analysis: A Generalization of the PAM Model.	ISBRA	2009	DBLP DOI BibTeX RDF	Protein homology analysis, amino acid sequence alignment, evolutionary kernel function, kernel-derived clusters, evolution modeling
29	Paulo Henrique Ribeiro Gabriel, Alexandre C. B. Delbem	Representations for Evolutionary Algorithms Applied to Protein Structure Prediction Problem Using HP Model.	BSB	2009	DBLP DOI BibTeX RDF	Representation of Evolutionary Algorithms, Cubic Lattice, Protein Structure Prediction, HP Model
29	Diego Rother, Guillermo Sapiro, Vijay Pande	Statistical Characterization of Protein Ensembles.	IEEE ACM Trans. Comput. Biol. Bioinform.	2008	DBLP DOI BibTeX RDF	protein ensembles, Bayesian networks, graphical models, bootstrapping, maximum likelihood, density estimation, cross-validation
29	George Lee 0002, Carlos Rodriguez, Anant Madabhushi	Investigating the Efficacy of Nonlinear Dimensionality Reduction Schemes in Classifying Gene and Protein Expression Studies.	IEEE ACM Trans. Comput. Biol. Bioinform.	2008	DBLP DOI BibTeX RDF	Data mining, Clustering, classification and association rules, Data and knowledge visualization, Feature extraction or construction, Bioinformatics (genome or protein) databases
29	Roberto Santana 0001, Pedro Larrañaga, José Antonio Lozano 0001	Adding Probabilistic Dependencies to the Search of Protein Side Chain Configurations Using EDAs.	PPSN	2008	DBLP DOI BibTeX RDF	probabilistic models, estimation of distribution algorithm, protein structure prediction
29	M. Michael Gromiha, Liang-Tsung Huang, Lien Fu Lai	Sequence Based Prediction of Protein Mutant Stability and Discrimination of Thermophilic Proteins.	PRIB	2008	DBLP DOI BibTeX RDF	Protein stability, thermophilic proteins, neural network, prediction, discrimination, rule generator, machine learning techniques
29	Pavol Jancura, Jaap Heringa, Elena Marchiori	Dividing Protein Interaction Networks by Growing Orthologous Articulations.	PRIB	2008	DBLP DOI BibTeX RDF	Protein network dividing, modular network alignment
29	Tamjidul Hoque, Madhu Chetty, Andrew Lewis, Abdul Sattar 0001	DFS Based Partial Pathways in GA for Protein Structure Prediction.	PRIB	2008	DBLP DOI BibTeX RDF	genetic algorithm, protein structure prediction, Depth-first search, lattice model
29	Rui Camacho, Alexessander Alves, Cândida G. Silva, Rui M. M. Brito	On Mining Protein Unfolding Simulation Data with Inductive Logic Programming.	IWPACBB	2008	DBLP DOI BibTeX RDF	Protein Unfolding, Inductive Logic Programming
29	Gouchol Pok, Cheng Hao Jin, Keun Ho Ryu	Correlation of Amino Acid Physicochemical Properties with Protein Secondary Structure Conformation.	BMEI (1)	2008	DBLP DOI BibTeX RDF	Amino acid physicochemical properties, Protein secondary structure
29	Beatriz García Jiménez, Ricardo Aler, Agapito Ledezma, Araceli Sanchis	Genetic Programming for Predicting Protein Networks.	IBERAMIA	2008	DBLP DOI BibTeX RDF	Protein interaction prediction, control bloat, machine learning, classification, genetic programming, evolutionary computation, data integration, bioinformatics
29	Roberto Teixeira Alves, Myriam Regattieri Delgado, Alex Alves Freitas	Multi-label Hierarchical Classification of Protein Functions with Artificial Immune Systems.	BSB	2008	DBLP DOI BibTeX RDF	Hierarchical and Multi-label Classification, Prediction of Protein Function, Artificial Immune System
29	Heitor Silvério Lopes, Reginaldo Bitello	A Differential Evolution Approach for Protein Folding Using a Lattice Model.	J. Comput. Sci. Technol.	2007	DBLP DOI BibTeX RDF	evolutionary computation, bioinformatics, differential evolution, protein folding
29	Jing-Fa Liu, Wen-Qi Huang	Quasi-Physical Algorithm of an Off-Lattice Model for Protein Folding Problem.	J. Comput. Sci. Technol.	2007	DBLP DOI BibTeX RDF	off-lattice model, quasi-physical algorithm, off-trap strategy, protein folding, NP-hard problem
29	Wei Zhong, Gulsah Altun, Xinmin Tian, Robert W. Harrison, Phang C. Tai, Yi Pan 0001	Parallel protein secondary structure prediction schemes using Pthread and OpenMP over hyper-threading technology.	J. Supercomput.	2007	DBLP DOI BibTeX RDF	DBNN (Denoeux Belief Neural Network), MPI (Message Passing Interface), Hyper-threading, BLOSUM62 matrix, Hydrophobicity matrix, PSSM (Position Specific Scoring Matrix), Neural networks, Parallel architecture, OpenMP, Speedup, Pthread, Protein secondary structure prediction
29	Kimberly A. Aeling, Nicholas R. Steffen, Matthew Johnson 0009, G. Wesley Hatfield, Richard H. Lathrop, Donald F. Senear	DNA Deformation Energy as an Indirect Recognition Mechanism in Protein-DNA Interactions.	IEEE ACM Trans. Comput. Biol. Bioinform.	2007	DBLP DOI BibTeX RDF	DNA-protein binding, indirect recognition, indirect readout, DNA bending, perceptron learning, deformation energy
29	Ove Daae Lampe, Ivan Viola, Nathalie Reuter, Helwig Hauser	Two-Level Approach to Efficient Visualization of Protein Dynamics.	IEEE Trans. Vis. Comput. Graph.	2007	DBLP DOI BibTeX RDF	protein dynamics, hardware acceleration, Molecular visualization
29	Barbora Kozlíková, Filip Andres, Jiri Sochor	Visualization of tunnels in protein molecules.	Afrigraph	2007	DBLP DOI BibTeX RDF	loop subdivision, visualization, protein, tunnel, tetrahedrization
29	Chun-Nam John Yu, Thorsten Joachims, Ron Elber, Jaroslaw Pillardy	Support Vector Training of Protein Alignment Models.	RECOMB	2007	DBLP DOI BibTeX RDF	Machine learning, Protein structure prediction, Pairwise sequence alignment
29	Dobrinka Petrova, Stoicho D. Stoichev	Protein structure similarity detection using alignment of secondary structure elements and their geometric properties.	CompSysTech	2007	DBLP DOI BibTeX RDF	alignment algorithm, protein structure similarity detection, secondary structure
29	Deok-Soo Kim, Bohyung Lee, Chung In Won, Donguk Kim 0001, Joonghyun Ryu, Youngsong Cho, Chong-Min Kim, Sunghoon Lee, Jonghwa Bhak	Multi-Resolution Protein Model.	ICCSA (2)	2007	DBLP DOI BibTeX RDF	a protein, a Voronoi diagram of atoms, drug design
29	Fábio L. Custódio, Helio J. C. Barbosa, Laurent Emmanuel Dardenne	Genetic Algorithm for Finding Multiple Low Energy Conformations of Poly Alanine Sequences Under an Atomistic Protein Model.	BSB	2007	DBLP DOI BibTeX RDF	multiple minima, genetic algorithm, protein structure prediction
29	Wei Chu, Zoubin Ghahramani, Alexei A. Podtelezhnikov, David L. Wild	Bayesian Segmental Models with Multiple Sequence Alignment Profiles for Protein Secondary Structure and Contact Map Prediction.	IEEE ACM Trans. Comput. Biol. Bioinform.	2006	DBLP DOI BibTeX RDF	Bayesian segmental semi-Markov models, multiple sequence alignment profiles, generative models, parametric models, protein secondary structure, contact maps
29	Petros Daras, Dimitrios Zarpalas, Apostolos Axenopoulos, Dimitrios Tzovaras, Michael G. Strintzis	Three-Dimensional Shape-Structure Comparison Method for Protein Classification.	IEEE ACM Trans. Comput. Biol. Bioinform.	2006	DBLP DOI BibTeX RDF	classification, Information search and retrieval, protein databases
29	Jacek Blazewicz, Piotr Lukasiak, Maciej Milostan	Some operations research methods for analyzing protein sequences and structures.	4OR	2006	DBLP DOI BibTeX RDF	clustering, neural networks, dynamic programming, hidden Markov model, Protein structure
29	Vincenzo Cutello, D. Lee, Giuseppe Nicosia, Mario Pavone, I. Prizzi	Aligning Multiple Protein Sequences by Hybrid Clonal Selection Algorithm with Insert-Remove-Gaps and BlockShuffling Operators.	ICARIS	2006	DBLP DOI BibTeX RDF	hypermutation operator, bioinformatics, multiple sequence alignment, immune algorithms, clonal selection algorithms, protein sequences
29	Alessandro Dal Palù, Enrico Pontelli, Jing He 0002, Yonggang Lu	A constraint logic programming approach to 3D structure determination of large protein complexes.	SAC	2006	DBLP DOI BibTeX RDF	constraint logic programming, protein structure
29	Rahul P. Maddimsetty, Jeremy Buhler, Roger D. Chamberlain, Mark A. Franklin, Brandon Harris	Accelerator design for protein sequence HMM search.	ICS	2006	DBLP DOI BibTeX RDF	protein motif, hidden Markov model, HMMER
29	Abiola Oduguwa, Ashutosh Tiwari, S. Fiorentino, Rajkumar Roy	Multi-objective optimisation of the protein-ligand docking problem in drug discovery.	GECCO	2006	DBLP DOI BibTeX RDF	evolutionary computing, drug discovery, multi-objective optimisation, protein-ligand docking
29	Zhengdeng Lei, Yang Dai	A Class of New Kernels Based on High-Scored Pairs of k-Peptides for SVMs and Its Application for Prediction of Protein Subcellular Localization.	Trans. Comp. Sys. Biology	2005	DBLP DOI BibTeX RDF	Protein subcellular localization, BLOSUM matrix, Gram-negative bacteria, support vector machine, kernel
29	Paul Davidsson, Johan Hagelbäck, Kenny Svensson	Comparing approaches to predict transmembrane domains in protein sequences.	SAC	2005	DBLP DOI BibTeX RDF	learning, classifiers, protein sequences
29	Vincenzo Cutello, Giuseppe Morelli, Giuseppe Nicosia, Mario Pavone	Immune Algorithms with Aging Operators for the String Folding Problem and the Protein Folding Problem.	EvoCOP	2005	DBLP DOI BibTeX RDF	memory B cells, functional model proteins, protein structure prediction, Clonal selection algorithms, HP model, aging operator
29	Zhengdeng Lei, Yang Dai	A New Kernel Based on High-Scored Pairs of Tri-peptides and Its Application in Prediction of Protein Subcellular Localization.	International Conference on Computational Science (2)	2005	DBLP DOI BibTeX RDF	protein subcellular localization, Gram-negative bacteria, BLOSUM matrix, support vector machine, kernel
29	Zhong Huang, Yun Li, Xiaohua Hu 0001	SVM Classification to Predict Two Stranded Anti-parallel Coiled Coils based on Protein Sequence Data.	ICCSA (3)	2005	DBLP DOI BibTeX RDF	coiled coil, SOCKET algorithm, protein sequence data, SVM
29	Jinbo Xu, Ming Li 0001, Ying Xu 0001	Protein Threading by Linear Programming: Theoretical Analysis and Computational Results.	J. Comb. Optim.	2004	DBLP DOI BibTeX RDF	CAFASP, integer program, branch-and-cut, cutting plane, protein threading
29	Yonghua Han, Bin Ma 0002, Kaizhong Zhang	SPIDER: Software for Protein Identification from Sequence Tags with De Novo Sequencing Error.	CSB	2004	DBLP DOI BibTeX RDF	de novo sequencing, sequence tags, database search, protein identification
29	Guo-Hui Lin, Dong Xu 0002, Zhi-Zhong Chen, Tao Jiang 0001, Jianjun Wen, Ying Xu 0001	An Efficient Branch-and-Bound Algorithm for the Assignment of Protein Backbone NMR Peaks.	CSB	2002	DBLP DOI BibTeX RDF	chemical shift, peak assignment, combinatorial technique, branch-and-bound, greedy algorithm, protein structure, bipartite matching, NMR
29	Deborah Goldman, Sorin Istrail, Christos H. Papadimitriou	Algorithmic Aspects of Protein Structure Similarity.	FOCS	1999	DBLP DOI BibTeX RDF	fold recognition, algorithms, computational complexity, computational biology, protein folding, structure alignment
28	Weikuan Yu, K. John Wu, Wei-Shinn Ku, Cong Xu, Juan Gao	BMF: Bitmapped Mass Fingerprinting for Fast Protein Identification.	CLUSTER	2011	DBLP DOI BibTeX RDF	Peptide Mass Fingerprinting, FastBit, Cray XT5, Protein Identification, Protein Databases
28	R. Rajgaria, Scott R. McAllister, Christodoulos A. Floudas	Distance Dependent Protein Force Field via Linear Optimization.	Encyclopedia of Optimization	2009	DBLP DOI BibTeX RDF	Potential model, High resolution decoys, Protein design potential, Protein structure prediction, Force field, Linear optimization
28	Roberto Santana 0001, Pedro Larrañaga, José Antonio Lozano 0001	Combining variable neighborhood search and estimation of distribution algorithms in the protein side chain placement problem.	J. Heuristics	2008	DBLP DOI BibTeX RDF	Rotamers, Protein side chain placement, EDAs, Protein folding, VNS, UMDA
27	Arvind Ramanathan, Pratul K. Agarwal, Maria G. Kurnikova, Christopher James Langmead	An Online Approach for Mining Collective Behaviors from Molecular Dynamics Simulations.	RECOMB	2009	DBLP DOI BibTeX RDF
27	Xuequn Shang, Zhanhuai Li, Wei Li	Mining functional associated patterns from biological network data.	SAC	2009	DBLP DOI BibTeX RDF	association mining, weighted graphs, biological networks
27	Ravi Gupta, Ankush Mittal, Kuldip Singh	A Novel and Efficient Technique for Identification and Classification of GPCRs.	IEEE Trans. Inf. Technol. Biomed.	2008	DBLP DOI BibTeX RDF
27	Alfonso Valencia	Text mining in genomics and systems biology.	DTMBIO	2008	DBLP DOI BibTeX RDF	text mining
27	Mio Seki, Jun Sese	Identification of active biological networks and common expression conditions.	BIBE	2008	DBLP DOI BibTeX RDF
27	Ernst Althaus, Stefan Canzar, Khaled M. Elbassioni, Andreas Karrenbauer, Julián Mestre	Approximating the Interval Constrained Coloring Problem.	SWAT	2008	DBLP DOI BibTeX RDF
27	Jun Jiang, Horace Ho-Shing Ip	Active learning for the prediction of phosphorylation sites.	IJCNN	2008	DBLP DOI BibTeX RDF
27	Rehab M. Duwairi, Amal Kassawneh	A framework for predicting proteins 3D structures.	AICCSA	2008	DBLP DOI BibTeX RDF
27	Michael L. Blinov, Jin Yang, James R. Faeder, William S. Hlavacek	Graph Theory for Rule-Based Modeling of Biochemical Networks.	Trans. Comp. Sys. Biology	2006	DBLP DOI BibTeX RDF
27	Wei Xie, Nikolaos V. Sahinidis	A Branch-and-Reduce Algorithm for the Contact Map Overlap Problem.	RECOMB	2006	DBLP DOI BibTeX RDF
27	Dapeng Hao, Xia Li 0004, Lei Du, Liangde Xu, Jiankai Xu, Shaoqi Rao	A Novel Method for Expanding Current Annotations in Gene Ontology.	ICIC (3)	2006	DBLP DOI BibTeX RDF
27	Michael Stout, Jaume Bacardit, Jonathan D. Hirst, Natalio Krasnogor, Jacek Blazewicz	From HP Lattice Models to Real Proteins: Coordination Number Prediction Using Learning Classifier Systems.	EvoWorkshops	2006	DBLP DOI BibTeX RDF
27	Oliver Korb, Thomas Stützle, Thomas E. Exner	PLANTS: Application of Ant Colony Optimization to Structure-Based Drug Design.	ANTS Workshop	2006	DBLP DOI BibTeX RDF
27	Gürkan Bebek, Petra Berenbrink, Colin Cooper, Tom Friedetzky, Joseph H. Nadeau, Süleyman Cenk Sahinalp	Improved Duplication Models for Proteome Network Evolution.	Systems Biology and Regulatory Genomics	2005	DBLP DOI BibTeX RDF
27	Lincong Wang, Bruce Randall Donald	An Efficient and Accurate Algorithm for Assigning Nuclear Overhauser Effect Restraints Using a Rotamer Library Ensemble and Residual Dipolar Couplings.	CSB	2005	DBLP DOI BibTeX RDF
27	Lech Znamirowski	Non-gradient, Sequential Algorithm for Simulation of Nascent Polypeptide Folding.	International Conference on Computational Science (1)	2005	DBLP DOI BibTeX RDF
27	I-Ane Huang, Jan-Ming Ho, Hung-Yu Kao, Shian-Hua Lin	Extracting Citation Metadata from Online Publication Lists Using BLAST.	PAKDD	2004	DBLP DOI BibTeX RDF
27	Chen-Hsiang Yeang, Tommi S. Jaakkola	Physical network models and multi-source data integration.	RECOMB	2003	DBLP DOI BibTeX RDF	data fusion, physical models, regulatory networks
27	Gareth Hannaford, Carsten Maple	Determining Candidate Binding Site Locations Using Conserved Features.	IV	2003	DBLP DOI BibTeX RDF
27	Rolf Backofen, Sebastian Will	Fast, Constraint-Based Threading of HP-Sequences to Hydrophobic Cores.	CP	2001	DBLP DOI BibTeX RDF
27	Maria I. Zavodszky, Andrew W. Stumpff-Kane, David J. Lee, Michael Feig	Scoring confidence index: statistical evaluation of ligand binding mode predictions.	J. Comput. Aided Mol. Des.	2009	DBLP DOI BibTeX RDF	Binding orientation, Correlation-based score, Energy landscape, Scoring function, Protein-ligand docking
27	Jianyu Shi, Yan-Ning Zhang	Fast SCOP Classification of Structural Class and Fold Using Secondary Structure Mining in Distance Matrix.	PRIB	2009	DBLP DOI BibTeX RDF	SCOP classification, secondary structure mining, support vector machines, image processing, protein structure, distance matrix
27	Takashi Abe, Shigehiko Kanaya, Toshimichi Ikemura	Batch-Learning Self-Organizing Map for Predicting Functions of Poorly-Characterized Proteins Massively Accumulated.	WSOM	2009	DBLP DOI BibTeX RDF	batch-learning SOM, oligopeptide frequency, high-performance supercomputer, bioinformatics, protein function
27	Sangyoon Lee	Analysis of Interhelical Angle and Sequential Distance in Proteins.	ICCSA (2)	2008	DBLP DOI BibTeX RDF	interhelical angle, sequential distance, protein, helix
27	Michel Nathan	A Multi-site Subcellular Localizer for Fungal Proteins.	Canadian AI	2007	DBLP DOI BibTeX RDF	fungal protein, decision tree, subcellular localization, multi-site