Search results for "Homology"

Hits ?▲	Authors	Title	Venue	Year	Link
13	Yunhao Zhang, Haowen Liu, Paul Rosen 0001, Mustafa Hajij	Mesh Learning Using Persistent Homology on the Laplacian Eigenfunctions.	CoRR	2019	DBLP BibTeX RDF
13	Jérémy Charlier, Radu State, Jean Hilger	PHom-GeM: Persistent Homology for Generative Models.	CoRR	2019	DBLP BibTeX RDF
13	Audun Myers, Elizabeth Munch, Firas A. Khasawneh	Persistent Homology of Complex Networks for Dynamic State Detection.	CoRR	2019	DBLP BibTeX RDF
13	Luciano Melodia, Richard Lenz	Persistent Homology as Stopping-Criterion for Natural Neighbor Interpolation.	CoRR	2019	DBLP BibTeX RDF
13	James R. Clough, Ilkay Öksüz, Nicholas Byrne, Veronika A. Zimmer, Julia A. Schnabel, Andrew P. King	A Topological Loss Function for Deep-Learning based Image Segmentation using Persistent Homology.	CoRR	2019	DBLP BibTeX RDF
13	Raphaël Tinarrage	Recovering the homology of immersed manifolds.	CoRR	2019	DBLP BibTeX RDF
13	Jiadong Han	An Adaptive Grid Algorithm for Computing the Homology Group of Semialgebraic Set.	CoRR	2019	DBLP BibTeX RDF
13	Michael Lesnick, Matthew Wright 0005	Computing Minimal Presentations and Betti Numbers of 2-Parameter Persistent Homology.	CoRR	2019	DBLP BibTeX RDF
13	James R. Clough, Ilkay Öksüz, Nicholas Byrne, Julia A. Schnabel, Andrew P. King	Explicit topological priors for deep-learning based image segmentation using persistent homology.	CoRR	2019	DBLP BibTeX RDF
13	Peter Bürgisser, Felipe Cucker, Josué Tonelli-Cueto	Computing the Homology of Semialgebraic Sets. II: General formulas.	CoRR	2019	DBLP BibTeX RDF
13	Vincent Knapps, Karl-Heinz Zimmermann	Distributed Monitoring of Topological Events via Homology.	CoRR	2019	DBLP BibTeX RDF
13	Mustafa Alhaji Isa	Homology modeling and molecular dynamic simulation of UDP-N-acetylmuramoyl-l-alanine-d-glutamate ligase (MurD) from Mycobacterium tuberculosis H37Rv using in silico approach.	Comput. Biol. Chem.	2019	DBLP DOI BibTeX RDF
13	Chenling Pan, Hao Meng, Shuqun Zhang, Zhili Zuo, Yuehai Shen, Liangliang Wang, Kwen-Jen Chang	Homology modeling and 3D-QSAR study of benzhydrylpiperazine δ opioid receptor agonists.	Comput. Biol. Chem.	2019	DBLP DOI BibTeX RDF
13	Mahmoud A. A. Ibrahim, Alaa H. M. Abdelrahman, Alaa M. A. Hassan	Identification of novel Plasmodium falciparum PI4KB inhibitors as potential anti-malarial drugs: Homology modeling, molecular docking and molecular dynamics simulations.	Comput. Biol. Chem.	2019	DBLP DOI BibTeX RDF
13	S. Vijayakumar, P. Manogar, S. Prabhu, M. Pugazhenthi, P. K. Praseetha	A pharmacoinformatic approach on Cannabinoid receptor 2 (CB2) and different small molecules: Homology modelling, molecular docking, MD simulations, drug designing and ADME analysis.	Comput. Biol. Chem.	2019	DBLP DOI BibTeX RDF
13	V. K. Adarsh, Arockiasamy Santhiagu	Identifying drug-like inhibitors of Mycobacterium tuberculosis H37Rv Seryl tRNA synthetase based on bioassay dataset: homology modelling, docking and molecular dynamics simulation.	Int. J. Comput. Biol. Drug Des.	2019	DBLP DOI BibTeX RDF
13	Mohammad Nauman, Hafeez Ur Rehman, Gianfranco Politano, Alfredo Benso	Beyond Homology Transfer: Deep Learning for Automated Annotation of Proteins.	J. Grid Comput.	2019	DBLP DOI BibTeX RDF
13	Maël Dugast, Guillaume Bouleux, Olivier Mory, Eric Marcon	Improving Health Care Management Through Persistent Homology of Time-Varying Variability of Emergency Department Patient Flow.	IEEE J. Biomed. Health Informatics	2019	DBLP DOI BibTeX RDF
13	Wei Zheng, Qiqige Wuyun, Yang Li 0107, S. M. Mortuza, Chengxin Zhang, Robin Pearce, Jishou Ruan, Yang Zhang 0040	Detecting distant-homology protein structures by aligning deep neural-network based contact maps.	PLoS Comput. Biol.	2019	DBLP DOI BibTeX RDF
13	Giacomo Janson, Alessandro Grottesi, Marco Pietrosanto, Gabriele Ausiello, Giulia Guarguaglini, Alessandro Paiardini	Revisiting the "satisfaction of spatial restraints" approach of MODELLER for protein homology modeling.	PLoS Comput. Biol.	2019	DBLP DOI BibTeX RDF
13	Andrew Newman	Small Simplicial Complexes with Prescribed Torsion in Homology.	Discret. Comput. Geom.	2019	DBLP DOI BibTeX RDF
13	Killian Meehan, Andrei Pavlichenko, Jan Segert	On the Structural Theorem of Persistent Homology.	Discret. Comput. Geom.	2019	DBLP DOI BibTeX RDF
13	Christopher Fowler	Homology of Multi-Parameter Random Simplicial Complexes.	Discret. Comput. Geom.	2019	DBLP DOI BibTeX RDF
13	Michael Kerber, Hannah Schreiber	Barcodes of Towers and a Streaming Algorithm for Persistent Homology.	Discret. Comput. Geom.	2019	DBLP DOI BibTeX RDF
13	Paul Samuel Ignacio, Isabel K. Darcy	Tracing patterns and shapes in remittance and migration networks via persistent homology.	EPJ Data Sci.	2019	DBLP DOI BibTeX RDF
13	Mehmet Emin Aktas, Esra Akbas, Ahmed El Fatmaoui	Persistence homology of networks: methods and applications.	Appl. Netw. Sci.	2019	DBLP DOI BibTeX RDF
13	Alan Hylton, Greg Henselman-Petrusek, Janche Sang, Robert Short	Tuning the performance of a computational persistent homology package.	Softw. Pract. Exp.	2019	DBLP DOI BibTeX RDF
13	Mustafa Alhaji Isa	Homology modeling and in silico toxicity assessment of potential inhibitors of cytidylate kinase from Mycobacterium tuberculosis.	Netw. Model. Anal. Health Informatics Bioinform.	2019	DBLP DOI BibTeX RDF
13	Sumit Bhatia, Bapi Chatterjee, Deepak Nathani, Manohar Kaul	A Persistent Homology Perspective to the Link Prediction Problem.	COMPLEX NETWORKS (1)	2019	DBLP DOI BibTeX RDF
13	Rentaro Futagami, Noritaka Yamada, Takeshi Shibuya	Inferring Underlying Manifold of Data by the Use of Persistent Homology Analysis.	CTIC	2019	DBLP DOI BibTeX RDF
13	Guillaume Damiand, Rocío González-Díaz	Persistent Homology Computation Using Combinatorial Map Simplification.	CTIC	2019	DBLP DOI BibTeX RDF
13	Tamal K. Dey	Computing Height Persistence and Homology Generators in R3 Efficiently.	SODA	2019	DBLP DOI BibTeX RDF
13	Noah Giansiracusa, Robert Giansiracusa, Chul Moon	Persistent Homology Machine Learning for Fingerprint Classification.	ICMLA	2019	DBLP DOI BibTeX RDF
13	Peter Lawson, Jordan Schupbach, Brittany Terese Fasy, John W. Sheppard	Persistent homology for the automatic classification of prostate cancer aggressiveness in histopathology images.	Medical Imaging: Digital Pathology	2019	DBLP DOI BibTeX RDF
13	J. Frederico Carvalho 0001, Mikael Vejdemo-Johansson, Florian T. Pokorny, Danica Kragic	Long-term Prediction of Motion Trajectories Using Path Homology Clusters.	IROS	2019	DBLP DOI BibTeX RDF
13	Yuan Wang, Hernando C. Ombao, Moo K. Chung	Statistical Persistent Homology of Brain Signals.	ICASSP	2019	DBLP DOI BibTeX RDF
13	Shotaro Tsuji, Kazuyuki Aihara	A Fast Method of Computing Persistent Homology of Time Series Data.	ICASSP	2019	DBLP DOI BibTeX RDF
13	Jean-Daniel Boissonnat, Siddharth Pritam	Computing Persistent Homology of Flag Complexes via Strong Collapses.	SoCG	2019	DBLP DOI BibTeX RDF
13	Ulderico Fugacci, Michael Kerber	Chunk Reduction for Multi-Parameter Persistent Homology.	SoCG	2019	DBLP DOI BibTeX RDF
13	Charmin Asirimath, Jayampathy Ratnayake, Chathuranga Weeraddana, Nandana Rajatheva	Critical Points to Determine Persistence Homology.	ACSSC	2019	DBLP DOI BibTeX RDF
13	Lei Xiang, Feng Yan 0004, Yaping Zhu, Weiwei Xia, Fei Shen 0001, Song Xing, Yi Wu 0010, Lianfeng Shen	A Homology Based Coverage Optimization Algorithm for Wireless Sensor Networks.	ADHOCNETS	2019	DBLP DOI BibTeX RDF
13	Simon Zhang, Mengbai Xiao, Chengxin Guo, Liang Geng, Hao Wang 0002, Xiaodong Zhang 0001	HYPHA: a framework based on separation of parallelisms to accelerate persistent homology matrix reduction.	ICS	2019	DBLP DOI BibTeX RDF
13	Tianchong Gao, Feng Li 0001	PHDP: Preserving Persistent Homology in Differentially Private Graph Publications.	INFOCOM	2019	DBLP DOI BibTeX RDF
13	Jieran Liu, Yuan Shen, Hanbing Yan	Functions-based CFG Embedding for Malware Homology Analysis.	ICT	2019	DBLP DOI BibTeX RDF
13	Kenta Machida, Osamu Tatebe	GHOSTZ PW/GF: Distributed Parallel Homology Search System for Large-scale Metagenomic Analysis.	IEEE BigData	2019	DBLP DOI BibTeX RDF
13	Nicholas O. Malott, Philip A. Wilsey	Fast Computation of Persistent Homology with Data Reduction and Data Partitioning.	IEEE BigData	2019	DBLP DOI BibTeX RDF
13	Tamal K. Dey, Ryan Slechta	Filtration Simplification for Persistent Homology via Edge Contraction.	DGCI	2019	DBLP DOI BibTeX RDF
13	Fan Wang 0010, Chunhua Deng, Bo Yuan 0001, Chao Chen	Hardware Acceleration of Persistent Homology Computation.	LABELS/HAL-MICCAI/CuRIOUS@MICCAI	2019	DBLP DOI BibTeX RDF
13	James R. Clough, Ilkay Öksüz, Nicholas Byrne, Julia A. Schnabel, Andrew P. King	Explicit Topological Priors for Deep-Learning Based Image Segmentation Using Persistent Homology.	IPMI	2019	DBLP DOI BibTeX RDF
13	Qing Liao 0001, Mingyue Guo, Bin Liu 0014	Protein Remote Homology Detection Based on Profiles.	IWBBIO (1)	2019	DBLP DOI BibTeX RDF
13	Felipe Cucker	Recent Advances in the Computation of the Homology of Semialgebraic Sets.	CiE	2019	DBLP DOI BibTeX RDF
13	Sergey Eremeev, Semyon Romanov	An Algorithm for Constructing a Topological Skeleton for Semi-structured Spatial Data Based on Persistent Homology.	AIST (Supplement)	2019	DBLP DOI BibTeX RDF
13	Christoph D. Hofer, Roland Kwitt, Marc Niethammer, Mandar Dixit	Connectivity-Optimized Representation Learning via Persistent Homology.	ICML	2019	DBLP BibTeX RDF
13	Xudong Zhang 0004, Pengxiang Wu, Changhe Yuan, Yusu Wang 0001, Dimitris N. Metaxas, Chao Chen 0012	Heuristic Search for Homology Localization Problem and Its Application in Cardiac Trabeculae Reconstruction.	IJCAI	2019	DBLP DOI BibTeX RDF
13	Nicolas Boutry, Thierry Géraud, Laurent Najman	An Equivalence Relation Between Morphological Dynamics and Persistent Homology in 1D.	ISMM	2019	DBLP DOI BibTeX RDF
13	Chao Chen 0012, Xiuyan Ni, Qinxun Bai, Yusu Wang 0001	A Topological Regularizer for Classifiers via Persistent Homology.	AISTATS	2019	DBLP BibTeX RDF
13	Anna Maria Bigatti, Jónathan Heras, Eduardo Sáenz-de-Cabezón	Monomial Resolutions for Efficient Computation of Simplicial Homology.	ISSAC	2019	DBLP DOI BibTeX RDF
13	Jérémy Charlier, Radu State, Jean Hilger	PHom-GeM: Persistent Homology for Generative Models.	SDS	2019	DBLP DOI BibTeX RDF
13	Ali M. Yazbeck	Improved Workflows for RNA Homology Search		2019	RDF
13	Masaki Kashiwara, Pierre Schapira	Persistent homology and microlocal sheaf theory.	J. Appl. Comput. Topol.	2018	DBLP DOI BibTeX RDF
13	Robert Ghrist, Rachel Levanger, Huy Mai	Persistent homology and Euler integral transforms.	J. Appl. Comput. Topol.	2018	DBLP DOI BibTeX RDF
13	Thomas Kahl	Labeled homology of higher-dimensional automata.	J. Appl. Comput. Topol.	2018	DBLP DOI BibTeX RDF
13	Samir Chowdhury 0001, Facundo Mémoli	A functorial Dowker theorem and persistent homology of asymmetric networks.	J. Appl. Comput. Topol.	2018	DBLP DOI BibTeX RDF
13	Felipe Cucker, Teresa Krick, Michael Shub	Computing the Homology of Real Projective Sets.	Found. Comput. Math.	2018	DBLP DOI BibTeX RDF
13	Xin Ning, Weijun Li, Jiang Xu	The Principle of Homology Continuity and Geometrical Covering Learning for Pattern Recognition.	Int. J. Pattern Recognit. Artif. Intell.	2018	DBLP DOI BibTeX RDF
13	Peng Wu, Junfeng Wang 0003, Bin Tian	Software Homology Detection With Software Motifs Based on Function-Call Graph.	IEEE Access	2018	DBLP DOI BibTeX RDF
13	Kedi Wu, Zhixiong Zhao, Renxiao Wang, Guo-Wei Wei 0001	TopP-S: Persistent homology-based multi-task deep neural networks for simultaneous predictions of partition coefficient and aqueous solubility.	J. Comput. Chem.	2018	DBLP DOI BibTeX RDF
13	Rabih Assaf, Alban Goupil, Valeriu Vrabie, Thomas Boudier, Mohammad Kacim	Persistent homology for object segmentation in multidimensional grayscale images.	Pattern Recognit. Lett.	2018	DBLP DOI BibTeX RDF
13	Bente Bakker, Jan Bouwe van den Berg, Robert C. A. M. Vandervorst	A Floer Homology Approach to Traveling Waves in Reaction-Diffusion Equations on Cylinders.	SIAM J. Appl. Dyn. Syst.	2018	DBLP DOI BibTeX RDF
13	Jens Keilwagen, Frank Hartung, Michael Paulini, Sven Twardziok, Jan Grau	Combining RNA-seq data and homology-based gene prediction for plants, animals and fungi.	BMC Bioinform.	2018	DBLP DOI BibTeX RDF
13	Teresa Maria Rosaria Noviello, Antonella Di Liddo, Giovanna M. M. Ventola, Antonietta Spagnuolo, Salvatore D'Aniello, Michele Ceccarelli, Luigi Cerulo	Detection of long non-coding RNA homology, a comparative study on alignment and alignment-free metrics.	BMC Bioinform.	2018	DBLP DOI BibTeX RDF
13	Dipali Singh, Karen R. M. Berntsen, Coos Baakman, Gert Vriend, Tapobrata Lahiri	A Critical Note on Symmetry Contact Artifacts and the Evaluation of the Quality of Homology Models.	Symmetry	2018	DBLP DOI BibTeX RDF
13	Young Chel Kwun, Abdul Rauf Nizami, Mobeen Munir, Zaffar Iqbal, Dishya Arshad, Shin Min Kang	Khovanov Homology of Three-Strand Braid Links.	Symmetry	2018	DBLP DOI BibTeX RDF
13	Pawel Dlotko, Thomas Wanner	Rigorous cubical approximation and persistent homology of continuous functions.	Comput. Math. Appl.	2018	DBLP DOI BibTeX RDF
13	Junjie Chen 0004, Mingyue Guo, Xiaolong Wang 0001, Bin Liu 0014	A comprehensive review and comparison of different computational methods for protein remote homology detection.	Briefings Bioinform.	2018	DBLP DOI BibTeX RDF
13	Sujoy Mukherjee, Józef H. Przytycki, Marithania Silvero, Xiao Wang, Seung Yeop Yang	Search for Torsion in Khovanov Homology.	Exp. Math.	2018	DBLP DOI BibTeX RDF
13	Chloé Quignot, Julien Rey, Jinchao Yu, Pierre Tufféry, Raphaël Guérois, Jessica Andreani	InterEvDock2: an expanded server for protein docking using evolutionary and biological information from homology models and multimeric inputs.	Nucleic Acids Res.	2018	DBLP DOI BibTeX RDF
13	Andrew Waterhouse, Martino Bertoni, Stefan Bienert, Gabriel Studer, Gerardo Tauriello, Rafal Gumienny, Florian T. Heer, Tjaart A. P. de Beer, Christine Rempfer, Lorenza Bordoli, Rosalba Lepore, Torsten Schwede	SWISS-MODEL: homology modelling of protein structures and complexes.	Nucleic Acids Res.	2018	DBLP DOI BibTeX RDF
13	Przemyslaw Miszta, Pawel Pasznik, Jakub Jakowiecki, Agnieszka Sztyler, Dorota Latek, Slawomir Filipek	GPCRM: a homology modeling web service with triple membrane-fitted quality assessment of GPCR models.	Nucleic Acids Res.	2018	DBLP DOI BibTeX RDF
13	Christopher J. Tralie, Nathaniel Saul, Rann Bar-On	Ripser.py: A Lean Persistent Homology Library for Python.	J. Open Source Softw.	2018	DBLP DOI BibTeX RDF
13	Raoul R. Wadhwa, Drew F. K. Williamson, Andrew Dhawan, James G. Scott	TDAstats: R pipeline for computing persistent homology in topological data analysis.	J. Open Source Softw.	2018	DBLP DOI BibTeX RDF
13	Shafie Gholizadeh, Armin Seyeditabari, Wlodek Zadrozny	Topological Signature of 19th Century Novelists: Persistent Homology in Text Mining.	Big Data Cogn. Comput.	2018	DBLP DOI BibTeX RDF
13	Primoz Skraba	Persistent Homology and Machine Learning.	Informatica (Slovenia)	2018	DBLP BibTeX RDF
13	Ippei Obayashi	Volume-Optimal Cycle: Tightest Representative Cycle of a Generator in Persistent Homology.	SIAM J. Appl. Algebra Geom.	2018	DBLP DOI BibTeX RDF
13	Mindaugas Margelevicius	A low-complexity add-on score for protein remote homology search with COMER.	Bioinform.	2018	DBLP DOI BibTeX RDF
13	Yannick Mahlich, Martin Steinegger, Burkhard Rost, Yana Bromberg	HFSP: high speed homology-driven function annotation of proteins.	Bioinform.	2018	DBLP DOI BibTeX RDF
13	Chirag Jain, Sergey Koren, Alexander T. Dilthey, Adam M. Phillippy, Srinivas Aluru	A fast adaptive algorithm for computing whole-genome homology maps.	Bioinform.	2018	DBLP DOI BibTeX RDF
13	Daniele Raimondi, Gabriele Orlando, Yves Moreau, Wim F. Vranken	Ultra-fast global homology detection with Discrete Cosine Transform and Dynamic Time Warping.	Bioinform.	2018	DBLP DOI BibTeX RDF
13	Sergio Castillo-Lara, Josep F. Abril	PlanNET: homology-based predicted interactome for multiple planarian transcriptomes.	Bioinform.	2018	DBLP DOI BibTeX RDF
13	Stefan C. Endres, Carl Sandrock, Walter W. Focke	A simplicial homology algorithm for Lipschitz optimisation.	J. Glob. Optim.	2018	DBLP DOI BibTeX RDF
13	Peter Bürgisser, Felipe Cucker, Josué Tonelli-Cueto	Computing the Homology of Semialgebraic Sets I: Lax Formulas.	CoRR	2018	DBLP BibTeX RDF
13	Alan Hylton, Greg Henselman-Petrusek, Janche Sang, Robert Short	Tuning the Performance of a Computational Persistent Homology Package.	CoRR	2018	DBLP BibTeX RDF
13	Tamal K. Dey, Ryan Slechta	Filtration Simplification for Persistent Homology via Edge Contraction.	CoRR	2018	DBLP BibTeX RDF
13	René Corbet, Ulderico Fugacci, Michael Kerber, Claudia Landi 0001, Bei Wang 0001	A Kernel for Multi-Parameter Persistent Homology.	CoRR	2018	DBLP BibTeX RDF
13	Lin Yan 0003, Yaodong Zhao, Paul Rosen 0001, Carlos Scheidegger, Bei Wang 0001	Homology-Preserving Dimensionality Reduction via Manifold Landmarking and Tearing.	CoRR	2018	DBLP BibTeX RDF
13	Sumit Bhatia, Bapi Chatterjee, Deepak Nathani, Manohar Kaul	Understanding and Predicting Links in Graphs: A Persistent Homology Perspective.	CoRR	2018	DBLP BibTeX RDF
13	Benjamin Schweinhart	The Persistent Homology of Random Geometric Complexes on Fractals.	CoRR	2018	DBLP BibTeX RDF
13	Tamal K. Dey, Mateusz Juda, Tomasz Kapela, Jacek Kubica, Michal Lipinski, Marian Mrozek	Persistent Homology of Morse Decompositions in Combinatorial Dynamics.	CoRR	2018	DBLP BibTeX RDF
13	Chuan Du, Christopher Szul, Adarsh Manawa, Nima Rasekh, Rosemary Guzman, Ruth Davidson	RGB image-based data analysis via discrete Morse theory and persistent homology.	CoRR	2018	DBLP BibTeX RDF
13	Woojin Kim 0001, Facundo Mémoli	Stable Persistent Homology Features of Dynamic Metric Spaces.	CoRR	2018	DBLP BibTeX RDF