Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
1 | Brendan Mumey, Brian W. Bailey, Edward A. Dratz |
Revealing protein structures: a new method for mapping antibody epitopes. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Andy Wildenberg, Steven Skiena, Pavel Sumazin |
Deconvolving sequence variation in mixed DNA populations. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Eran Segal, Yoseph Barash, Itamar Simon, Nir Friedman, Daphne Koller |
From promoter sequence to expression: a probabilistic framework. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Ziv Bar-Joseph, Georg K. Gerber, David K. Gifford, Tommi S. Jaakkola, Itamar Simon |
A new approach to analyzing gene expression time series data. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Phil Bradley, Peter S. Kim, Bonnie Berger |
Trilogy: discovery of sequence-structure patterns across diverse proteins. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Harold R. Garner |
Applied computational genomics: polymorphism prediction, data mining and genomic analysis. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Saurabh Sinha |
Discriminative motifs. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Li Liao, William Stafford Noble |
Combining pairwise sequence similarity and support vector machines for remote protein homology detection. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Adam C. Siepel |
An algorithm to enumerate all sorting reversals. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
genome rearrangements, sorting by reversals |
1 | Jürg Ott, Josephine Hoh |
Set association analysis of SNP case-control and microarray data. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
case control study, microarray, expression, association |
1 | Gerald M. Rubin |
Biological and computational annotation of the Drosophila Genome Sequence. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Sam Rash, Dan Gusfield |
String barcoding: uncovering optimal virus signatures. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
string barcoding, virus signatures, suffix trees, barcoding, testing set |
1 | David D. Ho |
Lymphocyte turnover in HIV-1 infection and the role of the thymus in SIV infection. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Miguel L. Teodoro, George N. Phillips, Lydia E. Kavraki |
A dimensionality reduction approach to modeling protein flexibility. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Ruben Abagyan |
Computational structural proteomics and virtual ligand screening. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Mehmet Serkan Apaydin, Douglas L. Brutlag, Carlos Guestrin, David Hsu, Jean-Claude Latombe |
Stochastic roadmap simulation: an efficient representation and algorithm for analyzing molecular motion. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Alberto Caprara, Giuseppe Lancia |
Structural alignment of large-size proteins via lagrangian relaxation. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Chris H. Q. Ding |
Analysis of gene expression profiles: class discovery and leaf ordering. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Amir Ben-Dor, Benny Chor, Richard M. Karp, Zohar Yakhini |
Discovering local structure in gene expression data: the order-preserving submatrix problem. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Gene Myers, Sridhar Hannenhalli, David Sankoff, Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman (eds.) |
Proceedings of the Sixth Annual International Conference on Computational Biology, RECOMB 2002, Washington, DC, USA, April 18-21, 2002 |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Jeremy Buhler |
Provably sensitive Indexing strategies for biosequence similarity search. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | J. Craig Venter |
Sequencing the human genome. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Lior Pachter, Fumei Lam |
Picking alignments from (steiner) trees. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Eran Segal, Daphne Koller |
Probabilistic hierarchical clustering for biological data. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Nadia El-Mabrouk, Mathieu Raffinot |
Approximate matching of secondary structures. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Dan Gusfield |
Haplotyping as perfect phylogeny: conceptual framework and efficient solutions. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
graph realization, graphic matroid recognition, haplotype inference, perfect phylogeny |
1 | Marc Vidal |
Toward a proteome atlas for C. Elegans. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Barry Cohen, Steven Skiena |
Designing RNA structures: natural and artificial selection. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Sèverine Bérard, Eric Rivals |
Comparison of minisatellites. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
minisatellite, overlap graphs, dynamic programming, bioinformatics, evolution, alignment, sequence comparison, tandem repeats |
1 | Uri Keich, Pavel A. Pevzner |
Finding motifs in the twilight zone. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Nancy M. Amato, Ken A. Dill, Guang Song |
Using motion planning to map protein folding landscapes and analyze folding kinetics of known native structures. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Minghua Deng, Shipra Mehta, Fengzhu Sun, Ting Chen 0006 |
Inferring domain-domain interactions from protein-protein interactions. |
RECOMB |
2002 |
DBLP DOI BibTeX RDF |
|
1 | Wentian Li |
DNA segmentation as a model selection process. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Jeremy Buhler, Martin Tompa |
Finding motifs using random projections. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Harmen J. Bussemaker, Hao Li, Eric D. Siggia |
Regulatory element detection using correlation with expression (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
cis-acting regulatory elements, linear least squares fit, microarrys, yeast |
1 | Oliver Kohlbacher, Andreas Burchardt, Andreas Moll, Andreas Hildebrandt 0001, Peter Bayer, Hans-Peter Lenhof |
A NMR-spectra-based scoring function for protein docking. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Nir Friedman, Matan Ninio, Itsik Pe'er, Tal Pupko |
A structural EM algorithm for phylogenetic inference. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Christopher James Langmead, Bruce Randall Donald |
Extracting structural information using time-frequency analysis of protein NMR data. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Vladimir Filkov, Steven Skiena, Jizu Zhi |
Analysis techniques for microarray time-series data. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Lior Pachter, Marina Alexandersson, Simon Cawley |
Applications of generalized pair hidden Markov models to alignment and gene finding problems. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Ralf Bundschuh |
Rapid significance estimation in local sequence alignment with gaps. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
Gumbel distribution, importance sampling, sequence alignment, statistical significance |
1 | Miklós Csürös |
Fast recovery of evolutionary trees with thousands of nodes. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Abdullah N. Arslan, Ömer Egecioglu, Pavel A. Pevzner |
A new approach to sequence comparison: normalized sequence alignment. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | George M. Church |
Hunger for new technologies, metrics, and spatiotemporal models in functional genomic (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Mathieu Blanchette |
Algorithms for phylogenetic footprinting. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
phylogenetic footprinting, regulatory elements, algorithm, phylogeny, motif finding |
1 | Ting Chen, Jacob D. Jaffe, George M. Church |
Algorithms for identifying protein cross-links via tandem mass spectrometry. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Yoseph Barash, Nir Friedman |
Context-specific Bayesian clustering for gene expression data. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Klaus Lindpaintner |
Genetics and genemoics: impact on drug discovery and development. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Thomas Lengauer (eds.) |
Proceedings of the Fifth Annual International Conference on Computational Biology, RECOMB 2001, Montréal, Québec, Canada, April 22-25, 2001 |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Guang Song, Nancy M. Amato |
Using motion planning to study protein folding pathways. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Matthias Wilm |
Creating the backbone for the virtual cell: cell mapping projects on the run (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Gert Thijs, Kathleen Marchal, Magali Lescot, Stephane Rombauts, Bart De Moor, Pierre Rouzé, Yves Moreau |
A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Ron Shamir, Dekel Tsur |
Large scale sequencing by hybridization. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Mengxiang Tang, Michael S. Waterman, Shibu Yooseph |
Zinc finger gene clusters and tandem gene duplication. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Pavel A. Pevzner, Haixu Tang, Michael S. Waterman |
A new approach to fragment assembly in DNA sequencing. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Amir Ben-Dor, Nir Friedman, Zohar Yakhini |
Class discovery in gene expression data. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Yonatan Bilu, Michal Linial |
On the predictive power of sequence similarity in yeast. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Michael T. Hallett, Jens Lagergren |
Efficient algorithms for lateral gene transfer problems. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Phil Bradley, Lenore Cowen, Matthew Menke, Jonathan King, Bonnie Berger |
Predicting the beta-helix fold from protein sequence data. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Paul Pavlidis, Jason Weston, Jinsong Cai, William Noble Grundy |
Gene functional classification from heterogeneous data. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Giuseppe Lancia, Robert D. Carr, Brian Walenz, Sorin Istrail |
101 optimal PDB structure alignments: a branch-and-cut algorithm for the maximum contact map overlap problem. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Daniel H. Huson, Knut Reinert, Eugene W. Myers |
The greedy path-merging algorithm for sequence assembly. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Gene Myers |
Comparing sequence scaffolds. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | B. Franz Lang |
Comparative analysis of organelle genomes, a biologist's view of computational challenges (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Alon Efrat, Frank Hoffmann 0002, Klaus Kriegel, Christof Schultz, Carola Wenk |
Geometric algorithms for the analysis of 2D-electrophoresis gels. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Mark Ptashne |
Imposing specificity by regulated localization (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Roger Brent |
Information processing by cells and biologists (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Yvonne C. Martin |
The role of computational chemistry in translating genomic information into bioactive small molecules (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Ting Chen |
Gene-finding via tandem mass spectrometry. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Richard Beigel, Noga Alon, Simon Kasif, Mehmet Serkan Apaydin, Lance Fortnow |
An optimal procedure for gap closing in whole genome shotgun sequencing. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Guohui Lin, Bin Ma 0002, Kaizhong Zhang |
Edit distance between two RNA structures. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Alan M. Frieze, Bjarni V. Halldórsson |
Optimal sequencing by hybridization in rounds. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
sequencing by hybridization, probabilistic analysis, DNA sequencing |
1 | Mona Singh 0001, Peter S. Kim |
Towards predicting coiled-coil protein interactions. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | John D. Kececioglu, Jun Ju |
Separtating repeats in DNA sequence assembly. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
disambiguating repeats, shotgun sequencing, computational biology, k-median problem |
1 | Mark Adams |
The sequence of the human genome (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Gonzalo Navarro 0001, Mathieu Raffinot |
Fast and simple character classes and bounded gaps pattern matching, with application to protein searching. |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
PROSITE, information retrieval, pattern matching, computational biology, bit-parallelism |
1 | Phillip A. Sharp |
RNA biology and the genome (abstract only). |
RECOMB |
2001 |
DBLP DOI BibTeX RDF |
|
1 | Tatsuya Akutsu, Hiroki Arimura, Shinichi Shimozono |
On approximation algorithms for local multiple alignment. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Ernst Althaus, Oliver Kohlbacher, Hans-Peter Lenhof, Peter Müller 0008 |
A combinatorial approach to protein docking with flexible side-chains. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Jadwiga R. Bienkowska, Lihua Yu, Sophia Zarakhovich, Robert G. Rogers, Temple F. Smith |
Comprehensive statistical method for protein fold recognition. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Serafim Batzoglou, Bonnie Berger, Jill P. Mesirov, Eric S. Lander |
Sequencing a genome by walking with clone-end sequences: a mathematical analysis (abstract). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Christopher Bailey-Kellogg, Alik Widge, John J. Kelley 0001, Marcelo J. Berardi, John H. Bushweller, Bruce Randall Donald |
The NOESY jigsaw: automated protein secondary structure and main-chain assignment from sparse, unassigned NMR data. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Sarah A. Teichmann, Cyrus Chothia, George M. Church, Jong-Chan Park |
PDB_ISL: an intermediate sequence library for protein structure assignment. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
PDB_ISL, PSI-BLAST, structure assignment, homology |
1 | Golan Yona, Michael Levitt |
A unified sequence-structure classification of protein sequences: combining sequence and structure in a map of the protein space. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Ying Xu 0001, Dong Xu 0002, Oakley H. Crawford, J. Ralph Einstein, Engin Serpersu |
Protein structure determination using protein threading and sparse NMR data (extended abstract). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
fold recognition, protein structure determination, energy minimization, protein threading, NMR |
1 | Elon Portugaly, Michal Linial |
Probabilities for having a new fold on the basis of a map of all protein sequences. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
global protein organization, statistical mode, structural genomics, clustering, structure prediction |
1 | Maricel Kann, Richard A. Goldstein |
Optimizing for success: a new score function for distantly related protein sequence comparison. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Donna K. Slonim, Pablo Tamayo, Jill P. Mesirov, Todd R. Golub, Eric S. Lander |
Class prediction and discovery using gene expression data. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Amir Ben-Dor, Richard M. Karp, Benno Schwikowski, Zohar Yakhini |
Universal DNA tag systems: a combinatorial design scheme. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Pavel A. Pevzner, Vlado Dancík, Chris L. Tang |
Mutation-tolerant protein identification by mass-spectrometry. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Henrik Kaessmann, Ingo Ebersberger, Victor Wiebe, Rikard Erlandsson, Jim F. Wilson, Carsten Schwarz, Michaela Winkler, Svante Pääbo |
DNA sequence variation among humans and apes (abstract only). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Minoru Kanehisa |
Sequence comparison to graph comparison--a new generation of algorithms for network analysis of interacting molecules (abstract only). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Y. Zenmei Ohkubo, Gordon M. Crippen |
Determining contact energy function for continuous state models of globular protein conformations. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Jon M. Sorenson, Teresa Head-Gordon |
Matching simulation and experiment (extended abstract): a new simplified model for simulating protein folding. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Takashi Gojobori, T. Daniel Andrews, Takeshi Itoh |
Evolutionary features of genomes as disclosed by comparative analysis of complete genome sequences (abstract only). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Nir Friedman, Michal Linial, Iftach Nachman, Dana Pe'er |
Using Bayesian networks to analyze expression data. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Adam Liwo, Jaroslaw Pillardy, Cezary Czaplewski, Jooyoung Lee 0002, Daniel R. Ripoll, Malgorzata Groth, Sylwia Rodziewicz-Motowidlo, Rajmund Kazmierkiewicz, Ryszard J. Wawak, Stanislaw Oldziej, Harold A. Scheraga |
UNRES: a united-residue force field for energy-based prediction of protein structure - orgin and significance of multibody terms. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Yvonne C. Martin, Mark G. Bures |
Molecular diversity: strategies and concerns (abstract only). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Richard Desper, Martin Vingron |
Tree fitting: an algebraic approach using profile distances. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Serafim Batzoglou, Lior Pachter, Jill P. Mesirov, Bonnie Berger, Eric S. Lander |
Human and mouse gene structure: comparative analysis and application to exon prediction. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
gene recognition, global alignments, comparative genomics |