Search results for "RECOMB"

Hits ?▲	Authors	Title	Venue	Year	Link	Author keywords
1	Benny Chor, Michael D. Hendy, Barbara R. Holland, David Penny	Multiple maxima of likelihood in phylogenetic trees: an analytic approach.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Xin Chen, Sam Kwong, Ming Li 0001	A compression algorithm for DNA sequences and its applications in genome comparison.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Ron Shamir, Satoru Miyano, Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman (eds.)	Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, RECOMB 2000, Tokyo, Japan, April 8-11, 2000	RECOMB	2000	DBLP DOI BibTeX RDF
1	Kevin C. Chen, Dannie Durand, Martin Farach-Colton	Notung: dating gene duplications using gene family trees.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Franco P. Preparata, Eli Upfal	Sequencing-by-hybridization at the information-theory bound: an optimal algorithm.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Steffen Hennig, Ralf Herwig, Matthew Clark, Pia Aanstad, A. Musa, John O'Brien, C. Bull, Uwe Radelof, Georgia Panopoulou, Albert J. Poustka, Hans Lehrach	A data-analysis pipeline for large-scale gene expression analysis.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Reece Hart, Ajay K. Royyuru, Gustavo Stolovitzky, Andrea Califano	Systematic and automated discovery of patterns in PROSITE families.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Alexander Zien, Ralf Zimmer, Thomas Lengauer	A simple iterative approach to parameter optimization.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Steffen Heber, Jens Stoye, Jörg D. Hoheisel, Martin Vingron	Contig selection in physical mapping.	RECOMB	2000	DBLP DOI BibTeX RDF
1	David Sankoff, David Bryant, Mélanie Deneault, B. Franz Lang, Gertraud Burger	Early eukaryote evolution based on mitochondrial gene order breakpoints.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Amir Ben-Dor, Laurakay Bruhn, Nir Friedman, Iftach Nachman, Michèl Schummer, Zohar Yakhini	Tissue classification with gene expression profiles.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Leroy E. Hood	Computing life and global technologies (abstract only).	RECOMB	2000	DBLP DOI BibTeX RDF
1	Walter Gilbert	Invited presentation: introns and modules in ancient conserved genes (abstract only).	RECOMB	2000	DBLP DOI BibTeX RDF
1	Laurent Marsan, Marie-France Sagot	Extracting structured motifs using a suffix tree - algorithms and application to promoter consensus identification.	RECOMB	2000	DBLP DOI BibTeX RDF	motif extraction, model, consensus, suffix tree, promoter, structured motif
1	Michael T. Hallett, Jens Lagergren	New algorithms for the duplication-loss model.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Tatsuya Akutsu, Satoru Miyano, Satoru Kuhara	Algorithms for identifying Boolean networks and related biological networks based on matrix multiplication and fingerprint function.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Ralf Bundschuh	An analytic approach to significance assessment in local sequence alignment with gaps.	RECOMB	2000	DBLP DOI BibTeX RDF	Gumbel distribution, sequence alignment, statistical significance
1	John D. Kececioglu, Sanjay Shete, Jonathan P. Arnold	Reconstructing distances in physical maps of chromosomes with nonoverlapping probes.	RECOMB	2000	DBLP DOI BibTeX RDF	physical mapping of chromosomes, sampling without replacement protocol, computational biology, maximum likelihood, convex optimization
1	Alberto Apostolico, Gill Bejerano	Optimal amnesic probabilistic automata or how to learn and classify proteins in linear time and space.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Yusuke Nakamura	Human genome analysis and medicine in the 21st century (abstract only).	RECOMB	2000	DBLP DOI BibTeX RDF
1	Masaru Tomita, Kenta Hashimoto, Koichi Takahashi, Yuri Matsuzaki, Ryo Matsushima, Katsuyuki Yugi, Fumihiko Miyoshi, Hisako Nakano, Yusuke Saito, Tom Shimizu, Yoichi Nakayama	The E-CELL project: towards integrative simulation of cellular processes.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Rune B. Lyngsø, Christian N. S. Pedersen	Pseudoknots in RNA secondary structures.	RECOMB	2000	DBLP DOI BibTeX RDF
1	Franco P. Preparata, Alan M. Frieze, Eli Upfal	On the power of universal bases in sequencing by hybridization.	RECOMB	1999	DBLP DOI BibTeX RDF
1	L. Paul Chew, Daniel P. Huttenlocher, Klara Kedem, Jon M. Kleinberg	Fast detection of common geometric substructure in proteins.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Martin J. Bayley, Valerie J. Gillet, Peter Willett 0002, John Bradshaw, Darren V. S. Green	Computational analysis of molecular diversity for drug discovery.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Piotr P. Slonimski	Comparison of complete genomes: Organization and evolution (abstract).	RECOMB	1999	DBLP DOI BibTeX RDF
1	Aris Floratos, Isidore Rigoutsos, Laxmi Parida, Gustavo Stolovitzky, Yuan Gao	Sequence homology detection through large scale pattern discovery.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Maxim Totrov, Ruben Abagyan	Derivation of sensitive discrimination potential for virtual ligand screening.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Steven M. LaValle, Paul W. Finn, Lydia E. Kavraki, Jean-Claude Latombe	Efficient database screening for rational drug design using pharmacophore-constrained conformational search.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Julie C. Mitchell, J. Ben Rosen, Andrew T. Phillips, Lynn F. Ten Eyck	Coupled optimization in protein docking.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Ed Southern	DNA microarrays - the how and the why.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Nadia El-Mabrouk, David Bryant, David Sankoff	Reconstructing the pre-doubling genome.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Alan A. Dombkowski, Gordon M. Crippen	A solvation potential with improved contact definitions and optimized by extensive threading.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Gill Bejerano, Golan Yona	Modeling protein families using probabilistic suffix trees.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Vincent Berry, David Bryant	Faster reliable phylogenetic analysis.	RECOMB	1999	DBLP DOI BibTeX RDF	combinatorially reliable edges, distance based methods, phylogeny reconstruction, quartet based methods, single linkage tree, polynomial time algorithms, computational biology
1	Thomas Christof, John D. Kececioglu	Computing physical maps of chromosomes with nonoverlapping probes by branch-and-cut.	RECOMB	1999	DBLP DOI BibTeX RDF	physical mapping of chromosomes, computational biology, branch-and-cut, consecutive ones property
1	Ting Chen, Vladimir Filkov, Steven Skiena	Identifying gene regulatory networks from experimental data.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Jadwiga R. Bienkowska, Robert G. Rogers, Temple F. Smith	A method for optimal design of a threading scoring function.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Peer Bork	Comparing genes and genomes (abstract): from polymorphism to phylogeny.	RECOMB	1999	DBLP DOI BibTeX RDF
1	John Moult	The past, present and future of protein structure prediction (abstract).	RECOMB	1999	DBLP DOI BibTeX RDF
1	Eric L. Anson, Eugene W. Myers	Algorithms for whole genome shotgun sequencing.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Jon M. Kleinberg	Efficient algorithms for protein sequence design and the analysis of certain evolutionary fitness landscapes.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Sarah A. Teichmann, Jong-Chan Park, Cyrus Chothia	Genome sequences and protein structures.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Richard H. Lathrop	An anytime algorithm for gapped block protein threading with pair interactions.	RECOMB	1999	DBLP DOI BibTeX RDF	contact potentials, fold recognition, inverse folding, knowledge-based potentials, pair potentials, search, sequence, protein threading, structure alignment
1	Daniel H. Huson, Scott Nettles, Tandy J. Warnow	Obtaining highly accurate topology estimates of evolutionary trees from very short sequences.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Timothy L. Bailey, William Noble Grundy	Classifying proteins by family using the product of correlated p-values.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Alberto Caprara	Formulations and hardness of multiple sorting by reversals.	RECOMB	1999	DBLP DOI BibTeX RDF	Eulerian graph, approximization complexity, cycle decomposition, integer linear programming, Hamiltonian cycle, perfect matching, sorting by reversals, signed permutation
1	Laurent Bize, Florence Muri, Franck Samson, François Rodolphe, S. Dusko Ehrlich, Bernard Prun, Philippe Bessières	Searching gene transfers on Bacillus subtilis using hidden Markov models.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Rune B. Lyngsø, Michael Zuker, Christian N. S. Pedersen	Internal loops in RNA secondary structure prediction.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Guy Mayraz, Ron Shamir	Construction of physical maps from oligonucleotide fingerprints data.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Daniel Cohen, Marta Blumenfeld, Ilya Chumakov, Nicholas J. Schork	Whole genome association studies in humans (abstract).	RECOMB	1999	DBLP DOI BibTeX RDF
1	Barry Cohen, Steven Skiena	Optimizing combinatorial library construction via split synthesis.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Piotr Berman, Zheng Zhang 0004, Yuri I. Wolf, Eugene V. Koonin, Webb Miller	Winnowing sequences from a database search.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Vlado Dancík, Theresa A. Addona, Karl R. Clauser, James E. Vath	De Novo peptide sequencing via tandem mass spectrometry: a graph-theoretical approach.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Christian V. Forst, Klaus Schulten	Evolution of metabolisms: a new method for the comparison of metabolic pathways.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Stefan Burkhardt, Andreas Crauser, Paolo Ferragina, Hans-Peter Lenhof, Eric Rivals, Martin Vingron	q-gram based database searching using a suffix array (QUASAR).	RECOMB	1999	DBLP DOI BibTeX RDF
1	John C. Wooley	Trends in computational biology.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Gregory R. Grant, R. S. Spielman, Elisabetta Manduchi, Vivian G. Cheung, Warren J. Ewens	Significance testing for genomic mismatch scanning.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Lawrence A. Kelley, Robert M. MacCallum, Michael J. E. Sternberg	Recognition of remote protein homologies using three-dimensional information to generate a position specific scoring matrix in the program 3D-PSSM.	RECOMB	1999	DBLP DOI BibTeX RDF
1	David Sankoff, Mathieu Blanchette	Probability models for genome rearrangement and linear invariants for phylogenetic inference.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Richard M. Karp, Roland Stoughton, Ka Yee Yeung	Algorithms for choosing differential gene expression experiments.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman (eds.)	Proceedings of the Third Annual International Conference on Research in Computational Molecular Biology, RECOMB 1999, Lyon, France, April 11-14, 1999	RECOMB	1999	DBLP DOI BibTeX RDF
1	Amir Ben-Dor, Zohar Yakhini	Clustering gene expression patterns.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Gene Myers	Progress toward the whole-genome shotgun sequencing of Drosophila.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Erez Hartuv, Armin O. Schmitt, Jörg Lange, Sebastian Meier-Ewert, Hans Lehrach, Ron Shamir	An algorithm for clustering cDNAs for gene expression analysis.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Lior Pachter, Serafim Batzoglou, Valentin I. Spitkovsky, William S. Beebee, Eric S. Lander, Bonnie Berger, Daniel J. Kleitman	A dictionary based approach for gene annotation.	RECOMB	1999	DBLP DOI BibTeX RDF
1	Wynn L. Walker, David S. Goodsell, Elliot M. Landaw	The theoretical limits of DNA sequence discrimination of polyamides.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Bin Ma 0002, Ming Li 0001, Louxin Zhang	On reconstructing species trees from gene trees in term of duplications and losses.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Shamil R. Sunyaev, Igor V. Rodchenkov, Frank Eisenhaber, Eugene N. Kuznetsov	Analysis of the position dependent amino acid probabilities and its application to the search for remote homologues.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman (eds.)	Proceedings of the Second Annual International Conference on Research in Computational Molecular Biology, RECOMB 1998, New York, NY, USA, March 22-25, 1998	RECOMB	1998	DBLP DOI BibTeX RDF
1	Emily Rocke, Martin Tompa	An algorithm for finding novel gapped motifs in DNA sequences.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Mireille Régnier	A unified approach to word statistics.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Cheng Che Chen, Jaswinder Pal Singh, Russ B. Altman	The hierarchical organization of molecular structure computations.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Richard M. Karp, Ron Shamir	Algorithms for optical mapping.	RECOMB	1998	DBLP DOI BibTeX RDF
1	David C. Schwartz, Thomas S. Anantharaman, C. Aston, Bud Mishra, V. Clarke, D. Gebauer, S. Delobette, E. Dimalanta, J. Edington, J. Evenzehav, J. Giacalone, C. Hiort, E. Huff, J. Jing, Z. Lai, E. Lee, J. Lin, B. Porter, R. Qi, Y. Skiadis	New approaches to genomic analysis using single molecules.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Ian Holmes, Richard Durbin	Dynamic programming alignment accuracy.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Charles R. Cantor	Enhancements in sequence analysis with DNA arrays (abstract).	RECOMB	1998	DBLP DOI BibTeX RDF
1	Laxmi Parida, Bud Mishra	Partitioning K clones: hardness results and practical algorithms for the K-populations problem.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Boris A. Reva, Alexei V. Finkelstein, Jeffrey Skolnick	A self-consistent field optimization approach to build energetically and geometrically correct lattice models of proteins.	RECOMB	1998	DBLP DOI BibTeX RDF
1	M. Levitt	Bridging the gap between sequence and structure (abstract).	RECOMB	1998	DBLP DOI BibTeX RDF
1	Alexei V. Finkelstein, Azat Ya. Badretdinov	How fast a protein chain can fold to its most stable structure?	RECOMB	1998	DBLP DOI BibTeX RDF
1	Jae Kyu Lee, Vlado Dancík, Michael S. Waterman	Estimation for restriction sites observed by optical mapping using reversible-jump Markov chain Monte Carlo.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Israel M. Gelfand, Alexander Kister, Casimir A. Kulikowski, Ognyan Stoyanov	Algorithmic determination of core positions in the VL and VH domains of immunoglobulin molecules.	RECOMB	1998	DBLP DOI BibTeX RDF
1	David G. Politte, David R. Maffitt, David J. States	Estimation of allele frequencies from color-multiplexed electropherograms.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Richard M. Fye, Craig J. Benham	A formally exact method to numerically analyze local denaturation in superhelical DNA.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Fengzhu Sun	Modeling DNA shuffling.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Klaus Gubernator	Evolutionary drug discovery (abstract).	RECOMB	1998	DBLP DOI BibTeX RDF
1	John R. Yates III	Mass spectrometry and the proteome (abstract).	RECOMB	1998	DBLP DOI BibTeX RDF
1	Zheng Zhang 0004, Piotr Berman, Webb Miller	Alignments without low-scoring regions.	RECOMB	1998	DBLP DOI BibTeX RDF
1	David R. Cox	The human genetic variation (abstract): oligonucleotide chips and human disease.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Arthur M. Lesk	Assessment of ab initio protein structure prediction.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Bonnie Berger, Frank Thomson Leighton	Protein folding in the hydrophobic-hydrophilic (HP) is NP-complete.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Daniel P. Fasulo, Tao Jiang 0001, Richard M. Karp, Nitin Sharma 0002	Constructing maps using the span and inclusion relations.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Jeffrey M. Koshi, David P. Mindell, Richard A. Goldstein	Beyond mutation matrices: physical-chemistry based evolutionary models.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Ying Xu 0001, Dong Xu 0002, Edward C. Uberbacher	A new method for modeling and solving the protein fold recognition problem (extended abstract).	RECOMB	1998	DBLP DOI BibTeX RDF
1	Ruben Abagyan	Challenges of biomolecular structure prediction (abstract).	RECOMB	1998	DBLP DOI BibTeX RDF
1	Pierluigi Crescenzi, Deborah Goldman, Christos H. Papadimitriou, Antonio Piccolboni, Mihalis Yannakakis	On the complexity of protein folding (abstract).	RECOMB	1998	DBLP DOI BibTeX RDF
1	William Noble Grundy	Family-based homology detection via pairwise sequence comparison.	RECOMB	1998	DBLP DOI BibTeX RDF
1	David Sankoff, Mathieu Blanchette	Multiple genome rearrangements.	RECOMB	1998	DBLP DOI BibTeX RDF
1	Alexander Vologodskii	Maxwell demon and topology simplification by type II topoisomerases.	RECOMB	1998	DBLP DOI BibTeX RDF

Publications at "RECOMB"( http://dblp.L3S.de/Venues/RECOMB )