Hits ?▲ |
Authors |
Title |
Venue |
Year |
Link |
Author keywords |
1 | Benny Chor, Michael D. Hendy, Barbara R. Holland, David Penny |
Multiple maxima of likelihood in phylogenetic trees: an analytic approach. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Xin Chen, Sam Kwong, Ming Li 0001 |
A compression algorithm for DNA sequences and its applications in genome comparison. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Ron Shamir, Satoru Miyano, Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman (eds.) |
Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, RECOMB 2000, Tokyo, Japan, April 8-11, 2000 |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Kevin C. Chen, Dannie Durand, Martin Farach-Colton |
Notung: dating gene duplications using gene family trees. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Franco P. Preparata, Eli Upfal |
Sequencing-by-hybridization at the information-theory bound: an optimal algorithm. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Steffen Hennig, Ralf Herwig, Matthew Clark, Pia Aanstad, A. Musa, John O'Brien, C. Bull, Uwe Radelof, Georgia Panopoulou, Albert J. Poustka, Hans Lehrach |
A data-analysis pipeline for large-scale gene expression analysis. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Reece Hart, Ajay K. Royyuru, Gustavo Stolovitzky, Andrea Califano |
Systematic and automated discovery of patterns in PROSITE families. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Alexander Zien, Ralf Zimmer, Thomas Lengauer |
A simple iterative approach to parameter optimization. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Steffen Heber, Jens Stoye, Jörg D. Hoheisel, Martin Vingron |
Contig selection in physical mapping. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | David Sankoff, David Bryant, Mélanie Deneault, B. Franz Lang, Gertraud Burger |
Early eukaryote evolution based on mitochondrial gene order breakpoints. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Amir Ben-Dor, Laurakay Bruhn, Nir Friedman, Iftach Nachman, Michèl Schummer, Zohar Yakhini |
Tissue classification with gene expression profiles. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Leroy E. Hood |
Computing life and global technologies (abstract only). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Walter Gilbert |
Invited presentation: introns and modules in ancient conserved genes (abstract only). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Laurent Marsan, Marie-France Sagot |
Extracting structured motifs using a suffix tree - algorithms and application to promoter consensus identification. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
motif extraction, model, consensus, suffix tree, promoter, structured motif |
1 | Michael T. Hallett, Jens Lagergren |
New algorithms for the duplication-loss model. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Tatsuya Akutsu, Satoru Miyano, Satoru Kuhara |
Algorithms for identifying Boolean networks and related biological networks based on matrix multiplication and fingerprint function. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Ralf Bundschuh |
An analytic approach to significance assessment in local sequence alignment with gaps. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
Gumbel distribution, sequence alignment, statistical significance |
1 | John D. Kececioglu, Sanjay Shete, Jonathan P. Arnold |
Reconstructing distances in physical maps of chromosomes with nonoverlapping probes. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
physical mapping of chromosomes, sampling without replacement protocol, computational biology, maximum likelihood, convex optimization |
1 | Alberto Apostolico, Gill Bejerano |
Optimal amnesic probabilistic automata or how to learn and classify proteins in linear time and space. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Yusuke Nakamura |
Human genome analysis and medicine in the 21st century (abstract only). |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Masaru Tomita, Kenta Hashimoto, Koichi Takahashi, Yuri Matsuzaki, Ryo Matsushima, Katsuyuki Yugi, Fumihiko Miyoshi, Hisako Nakano, Yusuke Saito, Tom Shimizu, Yoichi Nakayama |
The E-CELL project: towards integrative simulation of cellular processes. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Rune B. Lyngsø, Christian N. S. Pedersen |
Pseudoknots in RNA secondary structures. |
RECOMB |
2000 |
DBLP DOI BibTeX RDF |
|
1 | Franco P. Preparata, Alan M. Frieze, Eli Upfal |
On the power of universal bases in sequencing by hybridization. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | L. Paul Chew, Daniel P. Huttenlocher, Klara Kedem, Jon M. Kleinberg |
Fast detection of common geometric substructure in proteins. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Martin J. Bayley, Valerie J. Gillet, Peter Willett 0002, John Bradshaw, Darren V. S. Green |
Computational analysis of molecular diversity for drug discovery. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Piotr P. Slonimski |
Comparison of complete genomes: Organization and evolution (abstract). |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Aris Floratos, Isidore Rigoutsos, Laxmi Parida, Gustavo Stolovitzky, Yuan Gao |
Sequence homology detection through large scale pattern discovery. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Maxim Totrov, Ruben Abagyan |
Derivation of sensitive discrimination potential for virtual ligand screening. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Steven M. LaValle, Paul W. Finn, Lydia E. Kavraki, Jean-Claude Latombe |
Efficient database screening for rational drug design using pharmacophore-constrained conformational search. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Julie C. Mitchell, J. Ben Rosen, Andrew T. Phillips, Lynn F. Ten Eyck |
Coupled optimization in protein docking. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Ed Southern |
DNA microarrays - the how and the why. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Nadia El-Mabrouk, David Bryant, David Sankoff |
Reconstructing the pre-doubling genome. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Alan A. Dombkowski, Gordon M. Crippen |
A solvation potential with improved contact definitions and optimized by extensive threading. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Gill Bejerano, Golan Yona |
Modeling protein families using probabilistic suffix trees. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Vincent Berry, David Bryant |
Faster reliable phylogenetic analysis. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
combinatorially reliable edges, distance based methods, phylogeny reconstruction, quartet based methods, single linkage tree, polynomial time algorithms, computational biology |
1 | Thomas Christof, John D. Kececioglu |
Computing physical maps of chromosomes with nonoverlapping probes by branch-and-cut. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
physical mapping of chromosomes, computational biology, branch-and-cut, consecutive ones property |
1 | Ting Chen, Vladimir Filkov, Steven Skiena |
Identifying gene regulatory networks from experimental data. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Jadwiga R. Bienkowska, Robert G. Rogers, Temple F. Smith |
A method for optimal design of a threading scoring function. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Peer Bork |
Comparing genes and genomes (abstract): from polymorphism to phylogeny. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | John Moult |
The past, present and future of protein structure prediction (abstract). |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Eric L. Anson, Eugene W. Myers |
Algorithms for whole genome shotgun sequencing. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Jon M. Kleinberg |
Efficient algorithms for protein sequence design and the analysis of certain evolutionary fitness landscapes. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Sarah A. Teichmann, Jong-Chan Park, Cyrus Chothia |
Genome sequences and protein structures. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Richard H. Lathrop |
An anytime algorithm for gapped block protein threading with pair interactions. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
contact potentials, fold recognition, inverse folding, knowledge-based potentials, pair potentials, search, sequence, protein threading, structure alignment |
1 | Daniel H. Huson, Scott Nettles, Tandy J. Warnow |
Obtaining highly accurate topology estimates of evolutionary trees from very short sequences. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Timothy L. Bailey, William Noble Grundy |
Classifying proteins by family using the product of correlated p-values. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Alberto Caprara |
Formulations and hardness of multiple sorting by reversals. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
Eulerian graph, approximization complexity, cycle decomposition, integer linear programming, Hamiltonian cycle, perfect matching, sorting by reversals, signed permutation |
1 | Laurent Bize, Florence Muri, Franck Samson, François Rodolphe, S. Dusko Ehrlich, Bernard Prun, Philippe Bessières |
Searching gene transfers on Bacillus subtilis using hidden Markov models. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Rune B. Lyngsø, Michael Zuker, Christian N. S. Pedersen |
Internal loops in RNA secondary structure prediction. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Guy Mayraz, Ron Shamir |
Construction of physical maps from oligonucleotide fingerprints data. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Daniel Cohen, Marta Blumenfeld, Ilya Chumakov, Nicholas J. Schork |
Whole genome association studies in humans (abstract). |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Barry Cohen, Steven Skiena |
Optimizing combinatorial library construction via split synthesis. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Piotr Berman, Zheng Zhang 0004, Yuri I. Wolf, Eugene V. Koonin, Webb Miller |
Winnowing sequences from a database search. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Vlado Dancík, Theresa A. Addona, Karl R. Clauser, James E. Vath |
De Novo peptide sequencing via tandem mass spectrometry: a graph-theoretical approach. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Christian V. Forst, Klaus Schulten |
Evolution of metabolisms: a new method for the comparison of metabolic pathways. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Stefan Burkhardt, Andreas Crauser, Paolo Ferragina, Hans-Peter Lenhof, Eric Rivals, Martin Vingron |
q-gram based database searching using a suffix array (QUASAR). |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | John C. Wooley |
Trends in computational biology. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Gregory R. Grant, R. S. Spielman, Elisabetta Manduchi, Vivian G. Cheung, Warren J. Ewens |
Significance testing for genomic mismatch scanning. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Lawrence A. Kelley, Robert M. MacCallum, Michael J. E. Sternberg |
Recognition of remote protein homologies using three-dimensional information to generate a position specific scoring matrix in the program 3D-PSSM. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | David Sankoff, Mathieu Blanchette |
Probability models for genome rearrangement and linear invariants for phylogenetic inference. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Richard M. Karp, Roland Stoughton, Ka Yee Yeung |
Algorithms for choosing differential gene expression experiments. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman (eds.) |
Proceedings of the Third Annual International Conference on Research in Computational Molecular Biology, RECOMB 1999, Lyon, France, April 11-14, 1999 |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Amir Ben-Dor, Zohar Yakhini |
Clustering gene expression patterns. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Gene Myers |
Progress toward the whole-genome shotgun sequencing of Drosophila. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Erez Hartuv, Armin O. Schmitt, Jörg Lange, Sebastian Meier-Ewert, Hans Lehrach, Ron Shamir |
An algorithm for clustering cDNAs for gene expression analysis. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Lior Pachter, Serafim Batzoglou, Valentin I. Spitkovsky, William S. Beebee, Eric S. Lander, Bonnie Berger, Daniel J. Kleitman |
A dictionary based approach for gene annotation. |
RECOMB |
1999 |
DBLP DOI BibTeX RDF |
|
1 | Wynn L. Walker, David S. Goodsell, Elliot M. Landaw |
The theoretical limits of DNA sequence discrimination of polyamides. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Bin Ma 0002, Ming Li 0001, Louxin Zhang |
On reconstructing species trees from gene trees in term of duplications and losses. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Shamil R. Sunyaev, Igor V. Rodchenkov, Frank Eisenhaber, Eugene N. Kuznetsov |
Analysis of the position dependent amino acid probabilities and its application to the search for remote homologues. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Sorin Istrail, Pavel A. Pevzner, Michael S. Waterman (eds.) |
Proceedings of the Second Annual International Conference on Research in Computational Molecular Biology, RECOMB 1998, New York, NY, USA, March 22-25, 1998 |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Emily Rocke, Martin Tompa |
An algorithm for finding novel gapped motifs in DNA sequences. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Mireille Régnier |
A unified approach to word statistics. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Cheng Che Chen, Jaswinder Pal Singh, Russ B. Altman |
The hierarchical organization of molecular structure computations. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Richard M. Karp, Ron Shamir |
Algorithms for optical mapping. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | David C. Schwartz, Thomas S. Anantharaman, C. Aston, Bud Mishra, V. Clarke, D. Gebauer, S. Delobette, E. Dimalanta, J. Edington, J. Evenzehav, J. Giacalone, C. Hiort, E. Huff, J. Jing, Z. Lai, E. Lee, J. Lin, B. Porter, R. Qi, Y. Skiadis |
New approaches to genomic analysis using single molecules. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Ian Holmes, Richard Durbin |
Dynamic programming alignment accuracy. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Charles R. Cantor |
Enhancements in sequence analysis with DNA arrays (abstract). |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Laxmi Parida, Bud Mishra |
Partitioning K clones: hardness results and practical algorithms for the K-populations problem. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Boris A. Reva, Alexei V. Finkelstein, Jeffrey Skolnick |
A self-consistent field optimization approach to build energetically and geometrically correct lattice models of proteins. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | M. Levitt |
Bridging the gap between sequence and structure (abstract). |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Alexei V. Finkelstein, Azat Ya. Badretdinov |
How fast a protein chain can fold to its most stable structure? |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Jae Kyu Lee, Vlado Dancík, Michael S. Waterman |
Estimation for restriction sites observed by optical mapping using reversible-jump Markov chain Monte Carlo. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Israel M. Gelfand, Alexander Kister, Casimir A. Kulikowski, Ognyan Stoyanov |
Algorithmic determination of core positions in the VL and VH domains of immunoglobulin molecules. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | David G. Politte, David R. Maffitt, David J. States |
Estimation of allele frequencies from color-multiplexed electropherograms. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Richard M. Fye, Craig J. Benham |
A formally exact method to numerically analyze local denaturation in superhelical DNA. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Fengzhu Sun |
Modeling DNA shuffling. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Klaus Gubernator |
Evolutionary drug discovery (abstract). |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | John R. Yates III |
Mass spectrometry and the proteome (abstract). |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Zheng Zhang 0004, Piotr Berman, Webb Miller |
Alignments without low-scoring regions. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | David R. Cox |
The human genetic variation (abstract): oligonucleotide chips and human disease. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Arthur M. Lesk |
Assessment of ab initio protein structure prediction. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Bonnie Berger, Frank Thomson Leighton |
Protein folding in the hydrophobic-hydrophilic (HP) is NP-complete. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Daniel P. Fasulo, Tao Jiang 0001, Richard M. Karp, Nitin Sharma 0002 |
Constructing maps using the span and inclusion relations. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Jeffrey M. Koshi, David P. Mindell, Richard A. Goldstein |
Beyond mutation matrices: physical-chemistry based evolutionary models. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Ying Xu 0001, Dong Xu 0002, Edward C. Uberbacher |
A new method for modeling and solving the protein fold recognition problem (extended abstract). |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Ruben Abagyan |
Challenges of biomolecular structure prediction (abstract). |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Pierluigi Crescenzi, Deborah Goldman, Christos H. Papadimitriou, Antonio Piccolboni, Mihalis Yannakakis |
On the complexity of protein folding (abstract). |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | William Noble Grundy |
Family-based homology detection via pairwise sequence comparison. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | David Sankoff, Mathieu Blanchette |
Multiple genome rearrangements. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|
1 | Alexander Vologodskii |
Maxwell demon and topology simplification by type II topoisomerases. |
RECOMB |
1998 |
DBLP DOI BibTeX RDF |
|