Search results for "genome"

Hits ?▲	Authors	Title	Venue	Year	Link
9	Onur Mutlu, Can Firtina	Accelerating Genome Analysis via Algorithm-Architecture Co-Design.	CoRR	2023	DBLP DOI BibTeX RDF
9	Gunnar W. Reiske, Sungwon In, Yalong Yang 0001	Multi-Focus Querying of the Human Genome Information on Desktop and in Virtual Reality: an Evaluation.	CoRR	2023	DBLP DOI BibTeX RDF
9	Muyu Yang, Jian Ma 0004	UNADON: Transformer-based model to predict genome-wide chromosome spatial position.	CoRR	2023	DBLP DOI BibTeX RDF
9	Zhenfang Chen, Rui Sun, Wenjun Liu, Yining Hong, Chuang Gan	GENOME: GenerativE Neuro-symbOlic visual reasoning by growing and reusing ModulEs.	CoRR	2023	DBLP DOI BibTeX RDF
9	Hongtao Zhong, Zhonghao Chen, Wenqin Huangfu, Chen Wang, Yixin Xu, Tianyi Wang, Yao Yu, Yongpan Liu, Vijaykrishnan Narayanan, Huazhong Yang, Xueqing Li	ASMCap: An Approximate String Matching Accelerator for Genome Sequence Analysis Based on Capacitive Content Addressable Memory.	CoRR	2023	DBLP DOI BibTeX RDF
9	Micaela E. Consens, Cameron Dufault, Michael Wainberg, Duncan Forster, Mehran Karimzadeh, Hani Goodarzi, Fabian J. Theis, Alan Moses, Bo Wang	To Transformers and Beyond: Large Language Models for the Genome.	CoRR	2023	DBLP DOI BibTeX RDF
9	Lora Bailey, Heather C. Smith Blake, Garner Cochran, Nathan Fox, Michael Levet, Reem Mahmoud, Elizabeth Bailey Matson, Inne Singgih, Grace Stadnyk, Xinyi Wang, Alexander Wiedemann	Complexity and Enumeration in Models of Genome Rearrangement.	CoRR	2023	DBLP DOI BibTeX RDF
9	Minhao Li, Siyu Wang, Guanghao Wei	GPU Scheduler for De Novo Genome Assembly with Multiple MPI Processes.	CoRR	2023	DBLP DOI BibTeX RDF
9	Zhihan Zhou 0001, Yanrong Ji, Weijian Li, Pratik Dutta, Ramana V. Davuluri, Han Liu	DNABERT-2: Efficient Foundation Model and Benchmark For Multi-Species Genome.	CoRR	2023	DBLP DOI BibTeX RDF
9	Lun Ai 0001, Shi-Shun Liang, Wang-Zhou Dai, Liam Hallett, Stephen H. Muggleton, Geoff S. Baldwin	Human Comprehensible Active Learning of Genome-Scale Metabolic Networks.	CoRR	2023	DBLP DOI BibTeX RDF
9	Ashka Shah, Arvind Ramanathan, Valérie Hayot-Sasson, Rick Stevens	Causal Discovery and Optimal Experimental Design for Genome-Scale Biological Network Recovery.	CoRR	2023	DBLP DOI BibTeX RDF
9	Shivika Prasanna, Deepthi S. Rao, Eduardo Simoes, Praveen Rao 0001	Scalable Knowledge Graph Construction and Inference on Human Genome Variants.	CoRR	2023	DBLP DOI BibTeX RDF
9	Huijie Wang, Zhenbo Liu, Yang Li, Tianyu Li, Li Chen, Chonghao Sima, Yuting Wang, Shengyin Jiang, Feng Wen, Hang Xu, Ping Luo 0002, Junchi Yan, Wei Zhang 0196, Jun Yao, Yu Qiao 0006, Hongyang Li 0001	Road Genome: A Topology Reasoning Benchmark for Scene Understanding in Autonomous Driving.	CoRR	2023	DBLP DOI BibTeX RDF
9	R. Onur Öztornaci, Hamzah Syed, Andrew P. Morris, Bahar Tasdelen	The use of class imbalanced learning methods on ULSAM data to predict the case-control status in genome-wide association studies.	J. Big Data	2023	DBLP DOI BibTeX RDF
9	Abida Sultana, Sadia Jannat Mitu, Md Naimul Pathan, Mohammed Nasir Uddin, Md. Ashraf Uddin 0001, Sunil Aryal	4mC-CGRU: Identification of N4-Methylcytosine (4mC) sites using convolution gated recurrent unit in Rosaceae genome.	Comput. Biol. Chem.	2023	DBLP DOI BibTeX RDF
9	Nik Shazana Nik Mohd Sanusi, Rozana Rosli, Kuang-Lim Chan, Mohd Amin Ab Halim, Ngoot-Chin Ting, Rajinder Singh, Eng-Ti Leslie Low	Integrated consensus genetic map and genomic scaffold re-ordering of oil palm (Elaeis guineensis) genome.	Comput. Biol. Chem.	2023	DBLP DOI BibTeX RDF
9	M. Muthulakshmi, G. Murugeswari	A hybrid grey wolf-whale optimization algorithm for classification of corona virus genome sequences using deep learning.	Int. Arab J. Inf. Technol.	2023	DBLP DOI BibTeX RDF
9	Hao-Dong Xu, Johnathan Jia, Hyun-Hwan Jeong, Zhongming Zhao	Deep learning for detecting and elucidating human T-cell leukemia virus type 1 integration in the human genome.	Patterns	2023	DBLP DOI BibTeX RDF
9	Ran Wang, Cheng Xu 0003, Runshi Dong, Zhenghui Luo, Rong Zheng, Xiaotong Zhang 0002	A secured big-data sharing platform for materials genome engineering: State-of-the-art, challenges and architecture.	Future Gener. Comput. Syst.	2023	DBLP DOI BibTeX RDF
9	M. Saqib Nawaz, Philippe Fournier-Viger, Memoona Aslam, Wenjin Li, Yulin He, Xinzheng Niu	Using alignment-free and pattern mining methods for SARS-CoV-2 genome analysis.	Appl. Intell.	2023	DBLP DOI BibTeX RDF
9	Yongbin Zhu, Tao Li 0016, Xiaolong Lan	Feature selection optimized by the artificial immune algorithm based on genome shuffling and conditional lethal mutation.	Appl. Intell.	2023	DBLP DOI BibTeX RDF
9	Sayed Haidar Abbas Raza, Ruimin Zhong, Shen Xing, Xiaoting Yu, Liang Chengcheng, Linsen Zan, Nicola M. Schreurs, Sameer D. Pant, Hongtao Lei	Based on the Cancer Genome Atlas Database Development of a prognostic model of RNA binding protein in stomach adenocarcinoma.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Da Zhao, Pingli Chen, Zheng Chen, Lijun Zhang, Yansu Wang, Lei Xu	Genome-wide analysis of the LBD family in rice: Gene functions, structure and evolution.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Tianqi Liu, Yining Liu, Xiangqian Su, Lin Peng, Jiangbo Chen, Pu Xing, Xiaowen Qiao, Zaozao Wang, Jiabo Di, Min Zhao 0006, Beihai Jiang, Hong Qu	Genome-wide transcriptomics and copy number profiling identify patient-specific CNV-lncRNA-mRNA regulatory triplets in colorectal cancer.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Chun Wu, Nicholas Paradis, Phillip M. Lakernick, Mariya Hryb	L-shaped distribution of the relative substitution rate (c/μ) observed for SARS-COV-2's genome, inconsistent with the selectionist theory, the neutral theory and the nearly neutral theory but a near-neutral balanced selection theory: Implication on "neutralist-selectionist" debate.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Jinyi Qian, Yuzhou Wang, Xiner Liu, Zijian Hu, Nan Xu, Yuetong Wang, Tianqiong Shi, Chao Ye	Improving acetoin production through construction of a genome-scale metabolic model.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Peng-Fei Xu, Cong Li, Yin-Sheng Chen, De-Pei Li, Shaoyan Xi, Fu-Rong Chen, Xin Li, Zhong-Ping Chen	Radiomics-based survival risk stratification of glioblastoma is associated with different genome alteration.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Yulan Wang, Jian Zhao 0034, Jing Wu, Jingjing Liu, Yixuan Wang, Tianyi Xu, Meng Zhang, Minhui Zhuang, Lingxiao Zou, Wei Sun, Ping Han, Xiaofeng Song	Genome-wide perturbations of A-to-I RNA editing dysregulated circular RNAs promoting the development of cervical cancer.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Pritam Kundu, Amit Ghosh	Genome-scale community modeling for deciphering the inter-microbial metabolic interactions in fungus-farming termite gut microbiome.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Xiangting Guo, Yichu Guo, Hu Chen, Xiaoqing Liu, Ping-An He 0001, Wenshu Li, Michael Q. Zhang, Qi Dai	Systematic comparison of genome information processing and boundary recognition tools used for genomic island detection.	Comput. Biol. Medicine	2023	DBLP DOI BibTeX RDF
9	Yuan-Yu Chang, Sheng-Tang Wong, Emmanuel Oluwatobi Salawu, Ming-Hsuan Liao, Jui-Hung Hung, Lee-Wei Yang	Full-Privacy Secured Search Engine Empowered by Efficient Genome-Mapping Algorithms.	IEEE J. Biomed. Health Informatics	2023	DBLP DOI BibTeX RDF
9	Maxwell Neal, Deepan Thiruppathy, Karsten Zengler	Genome-scale metabolic modeling of the human gut bacterium Bacteroides fragilis strain 638R.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Tian Cai, Li Xie 0002, Shuo Zhang 0010, Muge Chen, Di He 0003, Amitesh Badkul, Yang Liu, Hari Krishna Namballa, Michael Dorogan, Wayne W. Harding, Cameron Mura, Philip E. Bourne, Lei Xie 0006	End-to-end sequence-structure-function meta-learning predicts genome-wide chemical-protein interactions for dark proteins.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Simone Pompei, Edoardo Bella, Joshua S. Weitz, Jacopo Grilli, Marco Cosentino Lagomarsino	Metacommunity structure preserves genome diversity in the presence of gene-specific selective sweeps under moderate rates of horizontal gene transfer.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Jean-Michel Arbona, Hadi Kabalane, Jeremy Barbier, Arach Goldar, Olivier Hyrien, Benjamin Audit	Neural network and kinetic modelling of human genome replication reveal replication origin locations and strengths.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Ryan R. Wick, Louise M. Judd, Kathryn E. Holt	Assembling the perfect bacterial genome using Oxford Nanopore and Illumina sequencing.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Diego Tec-Campos, Camila Posadas, Juan D. Tibocha-Bonilla, Deepan Thiruppathy, Nathan Glonek, Cristal Zuñiga, Alejandro Zepeda, Karsten Zengler	The genome-scale metabolic model for the purple non-sulfur bacterium Rhodopseudomonas palustris Bis A53 accurately predicts phenotypes under chemoheterotrophic, chemoautotrophic, photoheterotrophic, and photoautotrophic growth conditions.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Tareian A. Cazares, Faiz W. Rizvi, Balaji Iyer, Xiaoting Chen, Michael Kotliar, Anthony T. Bejjani, Joseph A. Wayman, Omer Donmez, Benjamin Wronowski, Sreeja Parameswaran, Leah C. Kottyan, Artem Barski, Matthew T. Weirauch, V. B. Surya Prasath, Emily R. Miraldi	maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Li Xie 0002, Lei Xie 0006	Elucidation of genome-wide understudied proteins targeted by PROTAC-induced degradation using interpretable machine learning.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Tyler W. H. Backman, Christina Schenk, Tijana Radivojevic, David Ando, Jahnavi Singh, Jeffrey J. Czajka, Zak Costello, Jay D. Keasling, Yinjie Tang, Elena V. Akhmatskaya, Héctor García Martín	BayFlux: A Bayesian method to quantify metabolic Fluxes and their uncertainty at the genome scale.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Jane A. Dwivedi-Yu, Zachary J. Oppler, Matthew W. Mitchell, Yun S. Song, Dustin Brisson	A fast machine-learning-guided primer design pipeline for selective whole genome amplification.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Emanuel Cunha, Miguel Silva, Inês Chaves, Hüseyin Demirci, Davide Lagoa, Diogo Lima, Miguel Rocha 0001, Isabel Rocha, Oscar Días	The first multi-tissue genome-scale metabolic model of a woody plant highlights suberin biosynthesis pathways in Quercus suber.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Alina Rekena, Marina J. Pinheiro, Nemailla Bonturi, Isma Belouah, Eliise Tammekivi, Koit Herodes, Eduard J. Kerkhoven, Petri-Jaan Lahtvee	Genome-scale metabolic modeling reveals metabolic trade-offs associated with lipid production in Rhodotorula toruloides.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Brittany Baur, Junha Shin, Jacob Schreiber, Shilu Zhang, Yi Zhang 0055, Mohith Manjunath, Jun S. Song, William Stafford Noble, Sushmita Roy	Leveraging epigenomes and three-dimensional genome organization for interpreting regulatory variation.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	William T. Scott Jr., Sara Benito-Vaquerizo, Johannes Zimmermann, Djordje Bajic, Almut Heinken, María Suárez-Diez, Peter J. Schaap	A structured evaluation of genome-scale constraint-based modeling tools for microbial consortia.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Andrés Cumsille, Roberto E. Durán, Andrea Rodríguez-Delherbe, Vicente Saona-Urmeneta, Beatriz Cámara, Michael Seeger, Mauricio Araya, Nicolás A. Jara, Carlos Buil-Aranda	GenoVi, an open-source automated circular genome visualizer for bacteria and archaea.	PLoS Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Sithara Vivek, Jessica Faul, Bharat Thyagarajan, Weihua Guan	Explainable variational autoencoder (E-VAE) model using genome-wide SNPs to predict dementia.	J. Biomed. Informatics	2023	DBLP DOI BibTeX RDF
9	Saeedeh Akbari Rokn Abadi, Amirhossein Mohammadi, Somayyeh Koohi	An automated ultra-fast, memory-efficient, and accurate method for viral genome classification.	J. Biomed. Informatics	2023	DBLP DOI BibTeX RDF
9	Michael Kwaku Tetteh, Allan de Lima, Jack McEllin, Aidan Murphy, Douglas Mota Dias, Conor Ryan	Evolving Multi-Output Digital Circuits Using Multi-Genome Grammatical Evolution.	Algorithms	2023	DBLP DOI BibTeX RDF
9	Xihao Li	Harnessing the Power of Statistics and Machine Learning in the Era of Biobank-Scale Whole-Genome Sequencing and Multi-Omics Studies.	XRDS	2023	DBLP DOI BibTeX RDF
9	Xiaojie Zhu, Erman Ayday, Roman Vitenberg	A Privacy-Preserving Framework for Conducting Genome-Wide Association Studies Over Outsourced Patient Data.	IEEE Trans. Dependable Secur. Comput.	2023	DBLP DOI BibTeX RDF
9	Yanjun Zhang, Guangdong Bai, Xue Li 0001, Surya Nepal, Marthie Grobler, Chen Chen 0056, Ryan K. L. Ko	Preserving Privacy for Distributed Genome-Wide Analysis Against Identity Tracing Attacks.	IEEE Trans. Dependable Secur. Comput.	2023	DBLP DOI BibTeX RDF
9	Caiqin Dong, Jian Weng 0001, Jia-Nan Liu, Anjia Yang, Zhiquan Liu, Yaxi Yang, Jianfeng Ma 0001	Maliciously Secure and Efficient Large-Scale Genome-Wide Association Study With Multi-Party Computation.	IEEE Trans. Dependable Secur. Comput.	2023	DBLP DOI BibTeX RDF
9	Puhua Niu, Maria J. Soto, Shuai Huang 0001, Byung-Jun Yoon, Edward R. Dougherty, Francis J. Alexander, Ian Blaby, Xiaoning Qian	Sensitivity Analysis of Genome-Scale Metabolic Flux Prediction.	J. Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Mona Meghdari Miardan, Arash Jamshidpey, David Sankoff	Escape from Parsimony of a Double-Cut-and-Join Genome Evolution Process.	J. Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Shijia Wang, Shufei Ge, Benjamin Sobkowiak, Liangliang Wang, Louis Grandjean, Caroline Colijn, Lloyd T. Elliott	Genome-Wide Association with Uncertainty in the Genetic Similarity Matrix.	J. Comput. Biol.	2023	DBLP DOI BibTeX RDF
9	Hari Om Sharn, Dev Bukhsh Singh, Pramod Kumar Yadav, Budhayash Gautam, Vipin Kumar, Satendra Singh	Genome annotation and comparative functional analysis of genomic islands in Bordetella pertussis Tohama I, Bordetella parapertussis 12822, and Bordetella bronchiseptica RB50 genomes.	Netw. Model. Anal. Health Informatics Bioinform.	2023	DBLP DOI BibTeX RDF
9	Manas Jyoti Das, Khawar Shehzad, Praveen Rao 0001	A Dataset of Network Traffic Collected During Large-Scale Human Genome Sequence Analysis.		2023	DOI RDF
9	Veli Mäkinen, Djamal Belazzougui, Fabio Cunial, Alexandru I. Tomescu	Genome-Scale Algorithm Design: Bioinformatics in the Era of High-Throughput Sequencing (2nd edition).		2023	RDF
9	Rabia Emhamed Al Mamlook, Ahmad Nasayreh, Hasan Gharaibeh, Sujeet Shrestha	Classification Of Cancer Genome Atlas Glioblastoma Multiform (TCGA-GBM) Using Machine Learning Method.	eIT	2023	DBLP DOI BibTeX RDF
9	Taha Shahroodi, Stephan Wong, Said Hamdioui	A Case for Genome Analysis Where Genomes Reside.	SAMOS	2023	DBLP DOI BibTeX RDF
9	Manas Jyoti Das, Khawar Shehzad, Praveen Rao 0001	Efficient Variant Calling on Human Genome Sequences Using a GPU-Enabled Commodity Cluster.	CIKM	2023	DBLP DOI BibTeX RDF
9	Kyoko Ito, Kazune Ezaki, Tomiko Yamaguchi	An Online Opinion-Learning Experiment Simulating Social Interaction on Emerging Technologies: A Case Study of Genome-Edited Crops.	HCI (6)	2023	DBLP DOI BibTeX RDF
9	Jean Merlet, John H. Lagergren, Verónica Melesse Vergara, Mikaela Cashman, Christopher E. Bradburne, Raina Plowright, Emily Gurley, Wayne Joubert, Daniel A. Jacobson	Data-Driven Whole-Genome Clustering to Detect Geospatial, Temporal, and Functional Trends in SARS-CoV-2 Evolution.	PASC	2023	DBLP DOI BibTeX RDF
9	Ashka Shah, Arvind Ramanathan, Valérie Hayot-Sasson, Rick Stevens	Causal Discovery and Optimal Experimental Design for Genome-Scale Biological Network Recovery.	PASC	2023	DBLP DOI BibTeX RDF
9	Hanning Chen, Yeseong Kim, Elaheh Sadredini, Saransh Gupta, Hugo Latapie, Mohsen Imani	Sparsity Controllable Hyperdimensional Computing for Genome Sequence Matching Acceleration.	VLSI-SoC	2023	DBLP DOI BibTeX RDF
9	Hamza Errahmouni Barkam, Sanggeon Yun, Paul R. Genssler, Zhuowen Zou, Che-Kai Liu, Hussam Amrouch, Mohsen Imani	HDGIM: Hyperdimensional Genome Sequence Matching on Unreliable highly scaled FeFET.	DATE	2023	DBLP DOI BibTeX RDF
9	Teresa Joven, Jorge Lázaro, Jorge Júlvez	Modeling Uncertain Biomass Composition in Genome-Scale Metabolic Models with Flexible Nets.	QEST	2023	DBLP DOI BibTeX RDF
9	Gunnar W. Reiske, Sungwon In, Yalong Yang 0001	Multi-Focus Querying of the Human Genome Information on Desktop and in Virtual Reality: an Evaluation.	ISMAR	2023	DBLP DOI BibTeX RDF
9	Max Doblas, Oscar Lostes-Cazorla, Quim Aguado-Puig, Nick Cebry, Pau Fontova-Musté, Christopher Frances Batten, Santiago Marco-Sola, Miquel Moretó	GMX: Instruction Set Extensions for Fast, Scalable, and Efficient Genome Sequence Alignment.	MICRO	2023	DBLP DOI BibTeX RDF
9	Yi Huang, Lingkun Kong, Dibei Chen, Zhiyu Chen 0003, Xiangyu Kong, Jianfeng Zhu 0001, Konstantinos Mamouras, Shaojun Wei, Kaiyuan Yang 0001, Leibo Liu	CASA: An Energy-Efficient and High-Speed CAM-based SMEM Seeding Accelerator for Genome Alignment.	MICRO	2023	DBLP DOI BibTeX RDF
9	Zuher Jahshan, Itay Merlin, Esteban Garzón, Leonid Yavits	DASH-CAM: Dynamic Approximate SearcH Content Addressable Memory for genome classification.	MICRO	2023	DBLP DOI BibTeX RDF
9	Ajeya Bhat, Sai Manasa Chadalavada, Nagakishore Jammula, Chirag Jain, Yogesh Simmhan	A Lossless Compression Pipeline for Petabyte-Scale Whole Genome Sequencing Data.	HiPC	2023	DBLP DOI BibTeX RDF
9	Han Yang, Fei Gu, Jieping Ye	Rethinking Learning-Based Method for Lossless Genome Compression.	ICASSP	2023	DBLP DOI BibTeX RDF
9	Marijo Simunovic, Lovro Vrcek, Mile Sikic	Graph Neural Network Meets de Bruijn Genome Assembly.	ISPA	2023	DBLP DOI BibTeX RDF
9	Zhuren Liu, Shouzhe Zhang, Justin Garrigus, Hui Zhao	Genomics-GPU: A Benchmark Suite for GPU-accelerated Genome Analysis.	ISPASS	2023	DBLP DOI BibTeX RDF
9	Seyed Ahmad Mirsalari, Saba Yousefzadeh, Giuseppe Tagliavini, Dimitrios Stathis 0001, Ahmed Hemani	Optimizing Self-Organizing Maps for Bacterial Genome Identification on Parallel Ultra-Low-Power Platforms.	ICECS	2023	DBLP DOI BibTeX RDF
9	Amirhossein Daneshpajouh, Megan Fowler, Kay C. Wiese	Navitas/Optimus: A Novel Computational Tool for enhanced CRISPR/Cas Genome Editing.	Canadian AI	2023	DBLP DOI BibTeX RDF
9	Fan Zhang 0069, Wangxin He, Injune Yeo, Maximilian Liehr, Nathaniel C. Cady, Yu Cao 0001, Jae-Sun Seo, Deliang Fan	A 65nm RRAM Compute-in-Memory Macro for Genome Sequencing Alignment.	ESSCIRC	2023	DBLP DOI BibTeX RDF
9	Diogo Pratas, Armando J. Pinho	JARVIS2: a data compressor for large genome sequences.	DCC	2023	DBLP DOI BibTeX RDF
9	Thomas Rowlands, Tim Beck	Text mining genome-wide association study literature.	SWAT4HCLS	2023	DBLP BibTeX RDF
9	Shuichi Kawashima, Takatomo Fujisawa, Toshiaki Katayama	Genome Variation Ontology for annotation of complex structural variations.	SWAT4HCLS	2023	DBLP BibTeX RDF
9	Yen-Lung Chen, Chung-Hsuan Yang, Yi-Chung Wu, Chao-Hsi Lee, Wen-Ching Chen, Liang-Yi Lin, Nian-Shyang Chang, Chun-Pin Lin, Chi-Shi Chen, Jui-Hung Hung, Chia-Hsiang Yang	A Fully Integrated End-to-End Genome Analysis Accelerator for Next-Generation Sequencing.	ISSCC	2023	DBLP DOI BibTeX RDF
9	Péter Lehotay-Kéry, Gabriella Kicska, Attila Kiss 0001	Genome classification with deep learning using heuristic algorithms for hyper-parameter optimization.	INISTA	2023	DBLP DOI BibTeX RDF
9	Aman Sinha, Yuhao Fang, Bo-Cheng Lai	REGAL: Reprogrammable Engines for Genome Analysis on LPDDR4x-based Stacked DRAM.	ISCAS	2023	DBLP DOI BibTeX RDF
9	Alberto Zeni, Guido Walter Di Donato, Alessia Della Valle, Filippo Carloni, Marco D. Santambrogio	On the Genome Sequence Alignment FPGA Acceleration via KSW2z.	ISCAS	2023	DBLP DOI BibTeX RDF
9	Qiaoji Xu, David Sankoff	Gene Order Phylogeny via Ancestral Genome Reconstruction Under Dollo.	RECOMB-CG	2023	DBLP DOI BibTeX RDF
9	Nikita Kohli, Jabed H. Tomal, Yan Yan	Identification of Important SNPs using Bayesian Deep Learning on Whole-Genome Arabidopsis thaliana Data.	BIBM	2023	DBLP DOI BibTeX RDF
9	Daniel Prado Cussi, V. E. Machaca Arceda	DNA Genome Classification with Machine Learning and Image Descriptors.	FICC (2)	2023	DBLP DOI BibTeX RDF
9	Miguel Pinheiro, Jorge Miguel Silva, José Luís Oliveira	Optimizing Variant Calling for Human Genome Analysis: A Comprehensive Pipeline Approach.	IWBBIO (2)	2023	DBLP DOI BibTeX RDF
9	Yue Qiu 0001, Yoshiki Nagasaki, Kensho Hara, Hirokatsu Kataoka, Ryota Suzuki 0006, Kenji Iwata, Yutaka Satoh	VirtualHome Action Genome: A Simulated Spatio-Temporal Scene Graph Dataset with Consistent Relationship Labels.	WACV	2023	DBLP DOI BibTeX RDF
9	Gautham Dharuman, Arvind Ramanathan	Protein Generation via Genome-scale Language Models with Bio-physical Scoring.	SC Workshops	2023	DBLP DOI BibTeX RDF
9	Sri Priya Ponnapalli, Penelope Miron, Kristy L. S. Miskimen, Kristin A. Waite, Nadiya Sosonkina, Sara E. Coppens, Anthony C. Bryan, Estevan P. Kiernan, Huanming Yang, Jay Bowen, Ghunwa A. Nakouzi, Jill S. Barnholtz-Sloan, Andrew E. Sloan, Tiffany R. Hodges, Orly Alter	AI/ML-Derived Whole-Genome Predictor Prospectively and Clinically Predicts Survival and Response to Treatment in Brain Cancer.	SC Workshops	2023	DBLP DOI BibTeX RDF
9	Andreas Bruns, Simon Parker, Fruzsina Molnár-Gábor, Eva C. Winkler	Developing Consent Tools for the Research Community at the German Human Genome-Phenome Archive (GHGA).	CoRDI	2023	DBLP DOI BibTeX RDF
9	Eric Apondo, Andrea Züger, Andreas Bruns, Katja Mehlis, Christoph Schickhardt, Eva C. Winkler	Establishing Adaptive Governance in NFDI Consortia: Lessons Learned from Deliberative Forums with Patients on their Role in the Governance of the German Human Genome-Phenome Archive (GHGA).	CoRDI	2023	DBLP DOI BibTeX RDF
9	Luiz M. R. Gadelha Jr., Jan Eufinger	The German Human Genome-Phenome Archive in an International Context: Toward a Federated Infrastructure for Managing and Analyzing Genomics and Health Data.	CoRDI	2023	DBLP DOI BibTeX RDF
9	Lorién López-Villellas, Esteve Pineda-Sánchez, Asaf Badouh, Santiago Marco-Sola, Pablo Ibáñez, Jesús Alastruey-Benedé, Miquel Moretó	RISC-V for Genome Data Analysis: Opportunities and Challenges.	DCIS	2023	DBLP DOI BibTeX RDF
9	Denys Maletskyi, Volodymyr Shymanskyi	Genome Compression Using Program Synthesis.	IDDM	2023	DBLP BibTeX RDF
9	Lora Bailey, Heather C. Smith Blake, Garner Cochran, Nathan Fox, Michael Levet, Reem Mahmoud, Elizabeth Bailey Matson, Inne Singgih, Grace Stadnyk, Xinyi Wang, Alexander Wiedemann	Complexity and Enumeration in Models of Genome Rearrangement.	COCOON (1)	2023	DBLP DOI BibTeX RDF
9	Yufeng Gu, Arun Subramaniyan 0001, Timothy Dunn, Alireza Khadem, Kuan-Yu Chen, Somnath Paul, Md. Vasimuddin, Sanchit Misra, David T. Blaauw, Satish Narayanasamy, Reetuparna Das	GenDP: A Framework of Dynamic Programming Acceleration for Genome Sequencing Analysis.	ISCA	2023	DBLP DOI BibTeX RDF